>MCM2_DROME (P49735) DNA replication licensing factor Mcm2 (Minichromosome|
           maintenance 2 protein) (DmMCM2)
          Length = 887

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = -2

Query: 371 THVEVKVDDLKNKAQEYEIYDLRPFFSGSHFNDNSFVLDEGRGII 237
           THVE+   DL  +A++ +I +L+PF+    F  N F  D  R II
Sbjct: 833 THVEIMERDLIERAKQLDIVNLKPFYESDLFRTNGFSYDPKRRII 877

>RDRP_PVXHB (Q07630) RNA replication protein (165 kDa protein) (ORF 1 protein)|
           [Includes: RNA-directed RNA polymerase (EC 2.7.7.48);
           Helicase (EC 3.6.1.-)]
          Length = 1456

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/66 (25%), Positives = 27/66 (40%)
 Frame = +1

Query: 1   GAYNTEL*HQEGTNISKCHWRHKGFR*QTVHQHQNSRKTDTSSHFANLHYKWTFLAGHLA 180
           GAY+ E  H +   + K  WR        +  H N       +H   +  + +F A HL 
Sbjct: 212 GAYHHEFSHLQSVKVGKIKWRDPK---DGLLGHLNYTHEQVDTHTVTVQLQESFAANHLY 268

Query: 181 LEQRGS 198
             +RG+
Sbjct: 269 CIRRGN 274

>MCM2_XENLA (P55861) DNA replication licensing factor MCM2 (x.MCM2)|
          Length = 886

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -2

Query: 365 VEVKVDDLKNKAQEYEIYDLRPFFSGSHFNDNSFVLDEGRGII 237
           +EV   DL +KA++  I++L  F+    F  N F  D  + +I
Sbjct: 840 IEVPEKDLVDKARQINIHNLSAFYDSDLFKMNKFTHDVKKKLI 882

>MCM2_HUMAN (P49736) DNA replication licensing factor MCM2 (Minichromosome|
           maintenance protein 2 homolog) (Nuclear protein BM28)
          Length = 904

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -2

Query: 365 VEVKVDDLKNKAQEYEIYDLRPFFSGSHFNDNSFVLDEGRGII 237
           +EV   DL +KA++  I++L  F+    F  N F  D  R +I
Sbjct: 858 IEVPEKDLVDKARQINIHNLSAFYDSELFRMNKFSHDLKRKMI 900

>RDRP_PVXX3 (P17779) RNA replication protein (165 kDa protein) (ORF 1 protein)|
           [Includes: RNA-directed RNA polymerase (EC 2.7.7.48);
           Helicase (EC 3.6.1.-)]
          Length = 1456

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/65 (26%), Positives = 25/65 (38%)
 Frame = +1

Query: 1   GAYNTEL*HQEGTNISKCHWRHKGFR*QTVHQHQNSRKTDTSSHFANLHYKWTFLAGHLA 180
           GAY+ E  H +   + K  WR       +   H N        H   +  + +F A HL 
Sbjct: 212 GAYHHEFAHLQWLKVGKIKWRDPK---DSFLGHLNYTTEQVEMHTVTVQLQESFAANHLY 268

Query: 181 LEQRG 195
             +RG
Sbjct: 269 CIRRG 273

>RDRP_PVX (P09395) RNA replication protein (165 kDa protein) (ORF 1 protein)|
           [Includes: RNA-directed RNA polymerase (EC 2.7.7.48);
           Helicase (EC 3.6.1.-)]
          Length = 1456

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/65 (26%), Positives = 25/65 (38%)
 Frame = +1

Query: 1   GAYNTEL*HQEGTNISKCHWRHKGFR*QTVHQHQNSRKTDTSSHFANLHYKWTFLAGHLA 180
           GAY+ E  H +   + K  WR       +   H N        H   +  + +F A HL 
Sbjct: 212 GAYHHEFSHLQWLKVGKIKWRDPK---DSFLGHLNYTTEQVEMHTVTVQLQESFAANHLY 268

Query: 181 LEQRG 195
             +RG
Sbjct: 269 CIRRG 273


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,466,963
Number of Sequences: 219361
Number of extensions: 897358
Number of successful extensions: 2175
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2174
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)