>gb|AY532594.1| Triticum aestivum minichromosomal maintenance factor (MCM2) mRNA,
            complete cds
          Length = 2923

 Score =  266 bits (134), Expect = 5e-68
 Identities = 176/190 (92%)
 Strand = Plus / Minus

                                                                        
Query: 200  gaggttgattgagttgttatgctgctactggatgcttgatgatcccacgcccttcatcca 259
            ||||| |||||||||||||||| || ||||||||| |||||||||||||||||||||| |
Sbjct: 2923 gaggtcgattgagttgttatgccgcaactggatgcctgatgatcccacgcccttcatcga 2864

                                                                        
Query: 260  ggacaaagctgttgtcgttgaagtgagagccggaaaagaagggcctcaaatcgtagatct 319
            ||||||||||||||||  |||||||||||| ||| ||||| |||||||  ||||||||||
Sbjct: 2863 ggacaaagctgttgtcactgaagtgagagctggagaagaacggcctcaggtcgtagatct 2804

                                                                        
Query: 320  catattcttgggccttgttcttcaggtcatccactttaacctcgacatgagtcaggcgtg 379
            ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 2803 catattcttgggccttgttcttcaggtcatccactttaacctcaacgtgagtcaggcgtg 2744

                      
Query: 380  tggttgatcc 389
            ||||||||||
Sbjct: 2743 tggttgatcc 2734

>gb|AY532593.1| Triticum aestivum minichromosomal maintenance factor (MCM2) gene,
            exons 1 through 18 and complete sequence
          Length = 8809

 Score =  212 bits (107), Expect = 6e-52
 Identities = 146/159 (91%)
 Strand = Plus / Minus

                                                                        
Query: 10   aacactgaattatgacatcaagaaggtacaaacatctctaaatgccactggaggcacaag 69
            ||||||||||||||| |||||||||||||| ||||||| ||||||| ||| |||||||||
Sbjct: 8241 aacactgaattatgatatcaagaaggtacagacatctcgaaatgccgctgtaggcacaag 8182

                                                                        
Query: 70   ggtttcagatagcaaacagtacaccaacaccagaattcccgtaaaacagacacgagcagt 129
            ||||||||||||||||||||||||||| | ||||| || |  ||||||||||| ||||||
Sbjct: 8181 ggtttcagatagcaaacagtacaccaatatcagaactctcacaaaacagacacaagcagt 8122

                                                   
Query: 130  cattttgccaacttacactacaagtggacatttctagct 168
            ||||||||| |||||||||||||||||||||||||||||
Sbjct: 8121 cattttgccgacttacactacaagtggacatttctagct 8083



 Score =  170 bits (86), Expect = 2e-39
 Identities = 125/138 (90%)
 Strand = Plus / Minus

                                                                        
Query: 197  gctgaggttgattgagttgttatgctgctactggatgcttgatgatcccacgcccttcat 256
            ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||| |
Sbjct: 8041 gctgatgttgattgagttgttatgctgcaactggatgcctgatgatcccacgcccttcgt 7982

                                                                        
Query: 257  ccaggacaaagctgttgtcgttgaagtgagagccggaaaagaagggcctcaaatcgtaga 316
            ||||||| |||||||||||| |||||||||||| ||| ||||| |||||||  |||||||
Sbjct: 7981 ccaggacgaagctgttgtcgctgaagtgagagctggagaagaacggcctcaggtcgtaga 7922

                              
Query: 317  tctcatattcttgggcct 334
            |||| || ||||||||||
Sbjct: 7921 tctcgtactcttgggcct 7904



 Score =  109 bits (55), Expect = 7e-21
 Identities = 58/59 (98%)
 Strand = Plus / Minus

                                                                       
Query: 332  ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcgtgtggttgatccc 390
            |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 7796 ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcgtgcggttgatccc 7738



 Score = 46.1 bits (23), Expect = 0.085
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 178  gctcttgaacaaagaggtagctg 200
            |||||||||||||||||||||||
Sbjct: 8085 gctcttgaacaaagaggtagctg 8063

>gb|AY109731.1| Zea mays CL9169_1 mRNA sequence
          Length = 623

 Score =  115 bits (58), Expect = 1e-22
 Identities = 136/162 (83%)
 Strand = Plus / Plus

                                                                       
Query: 228 tggatgcttgatgatcccacgcccttcatccaggacaaagctgttgtcgttgaagtgaga 287
           ||||||| ||||||||||||||||||||||||| |  |||| ||||||  |||||   | 
Sbjct: 178 tggatgcctgatgatcccacgcccttcatccagaaggaagccgttgtccctgaagcacgc 237

                                                                       
Query: 288 gccggaaaagaagggcctcaaatcgtagatctcatattcttgggccttgttcttcaggtc 347
           || ||| ||||| ||| ||| |||||||||||| |||||||||||||||||| |||||||
Sbjct: 238 gctggagaagaacggcttcagatcgtagatctcgtattcttgggccttgttcctcaggtc 297

                                                     
Query: 348 atccactttaacctcgacatgagtcaggcgtgtggttgatcc 389
            |||| ||| |||||||| ||||| || |||| || ||||||
Sbjct: 298 ctccaatttgacctcgacgtgagtaagacgtgaggctgatcc 339

>dbj|AK121422.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133N01, full
            insert sequence
          Length = 3214

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 118/142 (83%)
 Strand = Plus / Minus

                                                                        
Query: 236  tgatgatcccacgcccttcatccaggacaaagctgttgtcgttgaagtgagagccggaaa 295
            |||||||||| |||||||| || ||||| ||| |||||||  ||||||| | || ||| |
Sbjct: 2949 tgatgatcccccgcccttcgtcgaggacgaagttgttgtccctgaagtgggcgctggaga 2890

                                                                        
Query: 296  agaagggcctcaaatcgtagatctcatattcttgggccttgttcttcaggtcatccactt 355
            |||| || ||||  || ||||| || || || |||||||||||||||||||| || ||||
Sbjct: 2889 agaacggtctcaggtcatagatttcgtactcctgggccttgttcttcaggtcctctactt 2830

                                  
Query: 356  taacctcgacatgagtcaggcg 377
            |||||||||  |||||||||||
Sbjct: 2829 taacctcgatgtgagtcaggcg 2808

>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15,
              complete sequence
          Length = 149035

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                            
Query: 332    ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcg 377
              |||||||||||||||| || |||||||||||||  |||||||||||
Sbjct: 102584 ccttgttcttcaggtcctctactttaacctcgatgtgagtcaggcg 102539

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 332      ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcg 377
                |||||||||||||||| || |||||||||||||  |||||||||||
Sbjct: 16461985 ccttgttcttcaggtcctctactttaacctcgatgtgagtcaggcg 16461940

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 332      ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcg 377
                |||||||||||||||| || |||||||||||||  |||||||||||
Sbjct: 16552989 ccttgttcttcaggtcctctactttaacctcgatgtgagtcaggcg 16552944

>gb|AC102105.8| Mus musculus chromosome 12, clone RP23-89G24, complete sequence
          Length = 188853

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 188    aaagaggtagctgaggttgat 208
              |||||||||||||||||||||
Sbjct: 103298 aaagaggtagctgaggttgat 103318

>gb|AC069426.9| Homo sapiens 3 BAC RP11-200O17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 128500

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 334   ttgttcttcaggtcatccactttaacctc 362
             ||||||||||||||| |||||| ||||||
Sbjct: 50709 ttgttcttcaggtcacccacttgaacctc 50737

>gb|AC137849.11| Mus musculus chromosome 1, clone RP24-124J24, complete sequence
          Length = 178764

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   cttcatccaggacaaagctg 270
             ||||||||||||||||||||
Sbjct: 21112 cttcatccaggacaaagctg 21093

>gb|AC100531.15| Mus musculus chromosome 1, clone RP23-147I4, complete sequence
          Length = 202351

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 251   cttcatccaggacaaagctg 270
             ||||||||||||||||||||
Sbjct: 33699 cttcatccaggacaaagctg 33718

>gb|AC142351.1| Pan troglodytes BAC clone RP43-21J15 from 7, complete sequence
          Length = 159635

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     aaacatctctaaatgccact 58
              ||||||||||||||||||||
Sbjct: 104407 aaacatctctaaatgccact 104388

>emb|AL365203.19| Human DNA sequence from clone RP11-479G22 on chromosome 10 Contains the
             3' end of a novel gene (FLJ13031) (FLJ40349), the ITGB1
             gene for integrin beta 1 (fibronectin receptor beta
             polypeptide antigen CD29 includes MDF2 MSK12), an
             adenylate kinase 3 like 1 (AK3L1) pseudogene, a novel
             gene, the 5' end of a novel gene, a NADH dehydrogenase
             subunit 4L (ND4L) pseudogene, a pseudogene similar to part
             of integrin beta 2 (antigen CD18 (p95) lymphocyte
             function-associated antigen 1; macrophage antigen 1
             (mac-1) beta subunit) (ITGB2) and a CpG island, complete
             sequence
          Length = 197973

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    ggaggcacaagggtttcaga 78
             ||||||||||||||||||||
Sbjct: 92711 ggaggcacaagggtttcaga 92692

>emb|AL353645.16| Human DNA sequence from clone RP11-446A5 on chromosome 9 Contains the
            5' end of the AUH gene for AU RNA binding
            protein/enoyl-Coenzyme A hydratase and a CpG island,
            complete sequence
          Length = 31463

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  gaaaagaagggcctcaaatc 311
            ||||||||||||||||||||
Sbjct: 4097 gaaaagaagggcctcaaatc 4116

>gb|AC103949.6| Homo sapiens chromosome 18, clone RP11-671P2, complete sequence
          Length = 177301

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     aaacatctctaaatgccact 58
              ||||||||||||||||||||
Sbjct: 117250 aaacatctctaaatgccact 117231

>gb|AC026839.7| Homo sapiens chromosome 5, clone RP11-186B13, complete sequence
          Length = 156721

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    aaacatctctaaatgccact 58
             ||||||||||||||||||||
Sbjct: 25257 aaacatctctaaatgccact 25276

>gb|AC016580.7|AC016580 Homo sapiens chromosome 5 clone CTD-2509J24, complete sequence
          Length = 184118

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   gaaaagaagggcctcaaatc 311
             ||||||||||||||||||||
Sbjct: 76555 gaaaagaagggcctcaaatc 76536

>emb|BX934130.2| Gallus gallus finished cDNA, clone ChEST267k10
          Length = 1947

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 336  gttcttcaggtcatccactt 355
            ||||||||||||||||||||
Sbjct: 1258 gttcttcaggtcatccactt 1277

>dbj|AP000040.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 11/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   tgctgctactggatgcttga 238
             ||||||||||||||||||||
Sbjct: 14249 tgctgctactggatgcttga 14268

>gb|AC034246.4|AC034246 Homo sapiens chromosome 5 clone RP11-160F8, complete sequence
          Length = 155025

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 292    gaaaagaagggcctcaaatc 311
              ||||||||||||||||||||
Sbjct: 130355 gaaaagaagggcctcaaatc 130336

>gb|AC008960.6|AC008960 Homo sapiens chromosome 5 clone CTD-2354D24, complete sequence
          Length = 74999

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   gaaaagaagggcctcaaatc 311
             ||||||||||||||||||||
Sbjct: 32593 gaaaagaagggcctcaaatc 32612

>emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 map 22q22.11, complete
             sequence
          Length = 192328

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   tgctgctactggatgcttga 238
             ||||||||||||||||||||
Sbjct: 50412 tgctgctactggatgcttga 50431

>emb|BX571671.3| Zebrafish DNA sequence from clone DKEY-153O22 in linkage group 20,
             complete sequence
          Length = 86323

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   cttcaggtcatccactttaa 358
             ||||||||||||||||||||
Sbjct: 16672 cttcaggtcatccactttaa 16691

>emb|BX322618.8| Zebrafish DNA sequence from clone CH211-265G21 in linkage group 20,
             complete sequence
          Length = 144211

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 339   cttcaggtcatccactttaa 358
             ||||||||||||||||||||
Sbjct: 71855 cttcaggtcatccactttaa 71836

>dbj|AP001715.1| Homo sapiens genomic DNA, chromosome 21q, section 59/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 219    tgctgctactggatgcttga 238
              ||||||||||||||||||||
Sbjct: 179399 tgctgctactggatgcttga 179418

>dbj|AB056778.1| Macaca fascicularis brain cDNA clone:QccE-21094, full insert
           sequence
          Length = 1550

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 184 gaacaaagaggtagctgagg 203
           ||||||||||||||||||||
Sbjct: 727 gaacaaagaggtagctgagg 746

>dbj|AP000281.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:T1588, complete sequence
          Length = 66129

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   tgctgctactggatgcttga 238
             ||||||||||||||||||||
Sbjct: 58308 tgctgctactggatgcttga 58327

>dbj|AP000184.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 11/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   tgctgctactggatgcttga 238
             ||||||||||||||||||||
Sbjct: 20225 tgctgctactggatgcttga 20244

>dbj|AP000108.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 11/20
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   tgctgctactggatgcttga 238
             ||||||||||||||||||||
Sbjct: 20225 tgctgctactggatgcttga 20244


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,075,874
Number of Sequences: 3902068
Number of extensions: 3075874
Number of successful extensions: 62431
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62348
Number of HSP's gapped (non-prelim): 82
length of query: 393
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 371
effective length of database: 17,147,199,772
effective search space: 6361611115412
effective search space used: 6361611115412
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)