>gb|AY107387.1| Zea mays PCO149313 mRNA sequence
          Length = 1336

 Score =  167 bits (84), Expect = 3e-38
 Identities = 102/108 (94%)
 Strand = Plus / Minus

                                                                        
Query: 225  tttacctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagccc 284
            |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 1086 tttacctcaccgccccttggggttcatgatctgcgagaagacggcgctaggcgtcagccc 1027

                                                            
Query: 285  gtccgagtcgatgctcgcgacgctttggtcgcccatgcttatggaagt 332
             |||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct: 1026 atccgagtctatactcgcgacgctttggtcgcccatgcttatagaagt 979

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  111 bits (56), Expect = 1e-21
 Identities = 89/100 (89%)
 Strand = Plus / Minus

                                                                            
Query: 230      ctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccgtccg 289
                ||||||| |||||||||||||||||||| |||||||| ||||| || || |||||||| |
Sbjct: 32458055 ctcaccgtcccttggggttcatgatctgtgagaagacagcgctaggagtaagcccgtcgg 32457996

                                                        
Query: 290      agtcgatgctcgcgacgctttggtcgcccatgcttatgga 329
                |||| ||||| || || |||||||||||||||||||||||
Sbjct: 32457995 agtctatgctagcaacactttggtcgcccatgcttatgga 32457956

>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0665A11
          Length = 166421

 Score =  111 bits (56), Expect = 1e-21
 Identities = 89/100 (89%)
 Strand = Plus / Minus

                                                                         
Query: 230   ctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccgtccg 289
             ||||||| |||||||||||||||||||| |||||||| ||||| || || |||||||| |
Sbjct: 45576 ctcaccgtcccttggggttcatgatctgtgagaagacagcgctaggagtaagcccgtcgg 45517

                                                     
Query: 290   agtcgatgctcgcgacgctttggtcgcccatgcttatgga 329
             |||| ||||| || || |||||||||||||||||||||||
Sbjct: 45516 agtctatgctagcaacactttggtcgcccatgcttatgga 45477

>dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1143G03
          Length = 137770

 Score =  111 bits (56), Expect = 1e-21
 Identities = 89/100 (89%)
 Strand = Plus / Minus

                                                                          
Query: 230    ctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccgtccg 289
              ||||||| |||||||||||||||||||| |||||||| ||||| || || |||||||| |
Sbjct: 137552 ctcaccgtcccttggggttcatgatctgtgagaagacagcgctaggagtaagcccgtcgg 137493

                                                      
Query: 290    agtcgatgctcgcgacgctttggtcgcccatgcttatgga 329
              |||| ||||| || || |||||||||||||||||||||||
Sbjct: 137492 agtctatgctagcaacactttggtcgcccatgcttatgga 137453

>dbj|AK105465.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-126-A03, full
            insert sequence
          Length = 1761

 Score =  111 bits (56), Expect = 1e-21
 Identities = 89/100 (89%)
 Strand = Plus / Minus

                                                                        
Query: 230  ctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccgtccg 289
            ||||||| |||||||||||||||||||| |||||||| ||||| || || |||||||| |
Sbjct: 1505 ctcaccgtcccttggggttcatgatctgtgagaagacagcgctaggagtaagcccgtcgg 1446

                                                    
Query: 290  agtcgatgctcgcgacgctttggtcgcccatgcttatgga 329
            |||| ||||| || || |||||||||||||||||||||||
Sbjct: 1445 agtctatgctagcaacactttggtcgcccatgcttatgga 1406

>dbj|AK101775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064M23, full
            insert sequence
          Length = 3155

 Score =  111 bits (56), Expect = 1e-21
 Identities = 89/100 (89%)
 Strand = Plus / Minus

                                                                        
Query: 230  ctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccgtccg 289
            ||||||| |||||||||||||||||||| |||||||| ||||| || || |||||||| |
Sbjct: 2922 ctcaccgtcccttggggttcatgatctgtgagaagacagcgctaggagtaagcccgtcgg 2863

                                                    
Query: 290  agtcgatgctcgcgacgctttggtcgcccatgcttatgga 329
            |||| ||||| || || |||||||||||||||||||||||
Sbjct: 2862 agtctatgctagcaacactttggtcgcccatgcttatgga 2823

>ref|NM_191406.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2691

 Score =  109 bits (55), Expect = 6e-21
 Identities = 88/99 (88%)
 Strand = Plus / Minus

                                                                        
Query: 231  tcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccgtccga 290
            |||||| |||||||||||||||||||| |||||||| ||||| || || |||||||| ||
Sbjct: 2691 tcaccgtcccttggggttcatgatctgtgagaagacagcgctaggagtaagcccgtcgga 2632

                                                   
Query: 291  gtcgatgctcgcgacgctttggtcgcccatgcttatgga 329
            ||| ||||| || || |||||||||||||||||||||||
Sbjct: 2631 gtctatgctagcaacactttggtcgcccatgcttatgga 2593

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                            
Query: 226      ttacctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccg 285
                ||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||| 
Sbjct: 12284690 ttacctcaccgtcccttggggttcatgatctgcgagaagacagcactaggcgtcagccca 12284631

                                                         
Query: 286      tccgagtcgatgctcgcgacgctttggtcgcccatgcttat 326
                |||||||| || || || || || || || |||||||||||
Sbjct: 12284630 tccgagtcaatacttgcaacactctgctcacccatgcttat 12284590

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                            
Query: 226      ttacctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccg 285
                ||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||| 
Sbjct: 12281453 ttacctcaccgtcccttggggttcatgatctgcgagaagacagcactaggcgtcagccca 12281394

                                                         
Query: 286      tccgagtcgatgctcgcgacgctttggtcgcccatgcttat 326
                |||||||| || || || || || || || |||||||||||
Sbjct: 12281393 tccgagtcaatacttgcaacactctgctcacccatgcttat 12281353

>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0029K10, from chromosome 3, complete sequence
          Length = 135940

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                         
Query: 226   ttacctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccg 285
             ||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||| 
Sbjct: 54223 ttacctcaccgtcccttggggttcatgatctgcgagaagacagcactaggcgtcagccca 54164

                                                      
Query: 286   tccgagtcgatgctcgcgacgctttggtcgcccatgcttat 326
             |||||||| || || || || || || || |||||||||||
Sbjct: 54163 tccgagtcaatacttgcaacactctgctcacccatgcttat 54123

>dbj|AK099791.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097C16, full
            insert sequence
          Length = 3171

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                        
Query: 226  ttacctcaccgccccttggggttcatgatctgcgagaagaccgcgctcggcgtcagcccg 285
            ||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||| 
Sbjct: 2929 ttacctcaccgtcccttggggttcatgatctgcgagaagacagcactaggcgtcagccca 2870

                                                     
Query: 286  tccgagtcgatgctcgcgacgctttggtcgcccatgcttat 326
            |||||||| || || || || || || || |||||||||||
Sbjct: 2869 tccgagtcaatacttgcaacactctgctcacccatgcttat 2829

>emb|CR848816.11| Zebrafish DNA sequence from clone DKEY-99F10 in linkage group 11,
            complete sequence
          Length = 158354

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 167  atgaaaacacattgaatgaataaatt 192
            ||||||||||||| ||||||||||||
Sbjct: 7425 atgaaaacacatttaatgaataaatt 7450

>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 271     ctcggcgtcagcccgtccgag 291
               |||||||||||||||||||||
Sbjct: 1910765 ctcggcgtcagcccgtccgag 1910745

>gb|AC144645.17| Medicago truncatula clone mth2-11e15, complete sequence
          Length = 124394

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 164   ctcatgaaaacacattgaatg 184
             |||||||||||||||||||||
Sbjct: 55325 ctcatgaaaacacattgaatg 55345

>gb|AC013480.12| Homo sapiens BAC clone RP11-564O16 from 2, complete sequence
          Length = 128466

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 171  aaacacattgaatgaataaat 191
            |||||||||||||||||||||
Sbjct: 9561 aaacacattgaatgaataaat 9541

>ref|XM_640880.1| Dictyostelium discoideum hypothetical protein (DDB0216656), partial
            mRNA
          Length = 3588

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  tgaaaacacattgaatgaat 187
            ||||||||||||||||||||
Sbjct: 3025 tgaaaacacattgaatgaat 3006

>gb|AC117686.10| Mus musculus chromosome 16, clone RP23-440B15, complete sequence
          Length = 210851

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  actcatgaaaacacattgaa 182
            ||||||||||||||||||||
Sbjct: 6051 actcatgaaaacacattgaa 6032

>gb|AC129601.4| Mus musculus BAC clone RP23-444N1 from chromosome 16, complete sequence
          Length = 173054

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    actcatgaaaacacattgaa 182
              ||||||||||||||||||||
Sbjct: 134936 actcatgaaaacacattgaa 134917

>ref|XM_759090.1| Theileria parva strain Muguga chromosome 4 hypothetical protein
           (TP04_0548) partial mRNA
          Length = 1131

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 91  tcattacaacgctgaagaagaaga 114
           |||||| |||||||||||||||||
Sbjct: 8   tcattaaaacgctgaagaagaaga 31

>emb|AL359878.13| Human DNA sequence from clone RP11-363N22 on chromosome 10 Contains the
             5' end of gene KIAA0217, a novel gene, the 5' end of the
             gene for G protein-binding protein CRFG (NGB FLJ10686
             FLJ10690 FLJ39774) and four CpG islands, complete sequence
          Length = 184289

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   gaatgaataaattagggccg 199
             ||||||||||||||||||||
Sbjct: 94716 gaatgaataaattagggccg 94735

>emb|AL163191.2|SPAC140 S.pombe chromosome I cosmid c140
          Length = 15326

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   gaagaagaagaatacaaggc 123
             ||||||||||||||||||||
Sbjct: 12297 gaagaagaagaatacaaggc 12278

>gb|DQ350768.1| Ajellomyces capsulatus protein kinase-like protein (WIS1) gene,
            partial sequence
          Length = 3350

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 107  gaagaagaatacaaggcagg 126
            ||||||||||||||||||||
Sbjct: 2277 gaagaagaatacaaggcagg 2296

>gb|AC111099.15| Mus musculus chromosome 1, clone RP23-177A20, complete sequence
          Length = 195979

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 168   tgaaaacacattgaatgaataaat 191
             ||||||||||||||||||| ||||
Sbjct: 53339 tgaaaacacattgaatgaaaaaat 53316

>gb|AC009349.6|AC009349 Drosophila melanogaster, chromosome 3R, region 100C-100C, BAC clone
             BACR10O09, complete sequence
          Length = 165555

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   ttgaatgaataaattagggc 197
             ||||||||||||||||||||
Sbjct: 11693 ttgaatgaataaattagggc 11712

>gb|AC008287.4|AC008287 Drosophila melanogaster, chromosome 3R, region 100C-100C, BAC clone
              BACR02G16, complete sequence
          Length = 177480

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 178    ttgaatgaataaattagggc 197
              ||||||||||||||||||||
Sbjct: 101623 ttgaatgaataaattagggc 101642

>gb|AE003778.3| Drosophila melanogaster chromosome 3R, section 116 of 118 of the
             complete sequence
          Length = 225974

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   ttgaatgaataaattagggc 197
             ||||||||||||||||||||
Sbjct: 83890 ttgaatgaataaattagggc 83909

>emb|AL355177.14| Mouse DNA sequence from clone RP21-61H21 on chromosome 5, complete
             sequence
          Length = 134781

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   tgaaactcatgaaaacacat 178
             ||||||||||||||||||||
Sbjct: 98404 tgaaactcatgaaaacacat 98385


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,459,775
Number of Sequences: 3902068
Number of extensions: 3459775
Number of successful extensions: 65632
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65534
Number of HSP's gapped (non-prelim): 98
length of query: 333
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 311
effective length of database: 17,147,199,772
effective search space: 5332779129092
effective search space used: 5332779129092
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)