Clone Name | rbastl31e09 |
---|---|
Clone Library Name | barley_pub |
>GLMS_TREPA (O83833) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 634 Score = 30.8 bits (68), Expect = 0.83 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -2 Query: 255 CN*LQSCLVARMDRHATCTHSGGHVGVELVVSFDLKLICICI 130 CN +S LV D TH+G +GV SF +L+C+ + Sbjct: 387 CNGARSTLVRESDA-VLLTHAGSEIGVASTKSFTTQLVCLLV 427
>MURE_LISMO (Q8Y5L9) UDP-N-acetylmuramoylalanyl-D-glutamate--2,| 6-diaminopimelate ligase (EC 6.3.2.13) (UDP-N-acetylmuramyl-tripeptide synthetase) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase) Length = 491 Score = 28.9 bits (63), Expect = 3.2 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 6/95 (6%) Frame = +1 Query: 112 NFQYTLDTYTNKLKVKRHHQFNSYMSTRVGTSGMPVHSGNQTRLQLVTA---LVDGIKMF 282 ++ +T++ Y N + NSY ++ + + R+Q TA + GIK Sbjct: 205 DYHHTMEEYANAKSLLFAQLGNSYHTSNPKIAVLNADDAESVRMQKATAAHIITFGIKQE 264 Query: 283 LDEPPANAEV*EHSEGSSVTT---TFTSEHAMLGN 378 D +N ++ H + T FT + M+GN Sbjct: 265 ADFQASNIKITSHGSTFDLGTPVGNFTLKIKMIGN 299
>PHSA_SALTY (P37600) Thiosulfate reductase precursor (EC 1.-.-.-)| Length = 758 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +2 Query: 98 SSKDVTFSTHLIHIQISLRSKDTTSSTPTCP 190 SSK + S+HL H+ + S +T + TCP Sbjct: 145 SSKSGSLSSHLFHLATAFGSPNTFTHASTCP 175
>NPY6R_RABIT (P79217) Neuropeptide Y receptor type 6 (NPY6-R)| Length = 371 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = -1 Query: 127 VCTESYIFRTDTALSFTSTVCLAFFVDLRSLIFCGVYVSSC 5 VC E + +T+ L TS + L +FV L + C + + C Sbjct: 195 VCVEHWPSKTNQLLYSTSLIMLQYFVPLGFMFICYLKIVIC 235
>LSHB_HORSE (P08751) Lutropin/choriogonadotropin beta chain precursor| (LSH-B/CG-B) (Lutenizing hormone beta subunit) Length = 169 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -2 Query: 216 RHATCTHSGGHVGVELVVSFDLKLICICIKCVLKVTSLELIR 91 R A+ G GV+ +VSF + L C C C +K T + R Sbjct: 83 RFASIRLPGCPPGVDPMVSFPVALSCHCGPCQIKTTDCGVFR 124
>COMA_CONMA (Q9TWL9) Conodipine-M alpha chain (EC 3.1.1.4)| Length = 77 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/22 (50%), Positives = 12/22 (54%) Frame = -2 Query: 243 QSCLVARMDRHATCTHSGGHVG 178 Q +A DRH TC H G H G Sbjct: 26 QKXFLAACDRHDTCYHCGKHFG 47
>M4A8A_MOUSE (Q99N10) Membrane-spanning 4-domains subfamily A member 8A (CD20| antigen-like 5) (Fragment) Length = 287 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/42 (28%), Positives = 22/42 (52%) Frame = +1 Query: 175 NSYMSTRVGTSGMPVHSGNQTRLQLVTALVDGIKMFLDEPPA 300 NSY MP++ NQ ++ +++ + G+ + EPPA Sbjct: 56 NSYPVVPGTVPQMPIYPSNQPQVHVISGHLPGLVPAMTEPPA 97 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,091,795 Number of Sequences: 219361 Number of extensions: 1208789 Number of successful extensions: 3180 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3180 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)