Clone Name | rbastl31e06 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ctggcaagagatatattcctttgaa 117 |||||||||||| |||||||||||| Sbjct: 1511287 ctggcaagagatgtattcctttgaa 1511263
>gb|AC153877.5| Mus musculus 6 BAC RP23-258E21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232977 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 tgaaccaccagttttacctgg 257 ||||||||||||||||||||| Sbjct: 15794 tgaaccaccagttttacctgg 15774
>gb|AC154011.3| Mus musculus 6 BAC RP24-261O15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 146781 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 tgaaccaccagttttacctgg 257 ||||||||||||||||||||| Sbjct: 119717 tgaaccaccagttttacctgg 119697
>gb|AC093353.11| Mus musculus chromosome 10, clone RP23-19C22, complete sequence Length = 188921 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gtgaagtcacaatacaatct 54 |||||||||||||||||||| Sbjct: 81116 gtgaagtcacaatacaatct 81097
>gb|AC124585.3| Mus musculus BAC clone RP23-130P17 from chromosome 10, complete sequence Length = 198030 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gtgaagtcacaatacaatct 54 |||||||||||||||||||| Sbjct: 193926 gtgaagtcacaatacaatct 193907
>emb|AL450427.11| Human DNA sequence from clone RP11-372H19 on chromosome 6, complete sequence Length = 68843 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 tctggcaagagatatattcctttg 115 ||||||| |||||||||||||||| Sbjct: 26060 tctggcaggagatatattcctttg 26083
>gb|AC007849.24| Homo sapiens 3 BAC RP11-3K16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 199835 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 ctttgaattgtctttgtggc 130 |||||||||||||||||||| Sbjct: 59910 ctttgaattgtctttgtggc 59929
>gb|AE004731.1| Pseudomonas aeruginosa PAO1, section 292 of 529 of the complete genome Length = 18765 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgacagcggcaccagggtat 367 |||||||||||||||||||| Sbjct: 12612 cgacagcggcaccagggtat 12593
>gb|AC117792.6| Mus musculus chromosome 8, clone RP24-549A13, complete sequence Length = 174210 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tacctgggcagttctaccat 270 |||||||||||||||||||| Sbjct: 100742 tacctgggcagttctaccat 100761 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,375,818 Number of Sequences: 3902068 Number of extensions: 3375818 Number of successful extensions: 56268 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56246 Number of HSP's gapped (non-prelim): 22 length of query: 405 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 383 effective length of database: 17,147,199,772 effective search space: 6567377512676 effective search space used: 6567377512676 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)