ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl31d09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EX7L_XANAC (Q8PJW7) Probable exodeoxyribonuclease VII large subu... 30 1.0
2NPT2B_HUMAN (O95436) Sodium-dependent phosphate transport protei... 27 1.1
3NPT2B_PONPY (Q5REV9) Sodium-dependent phosphate transport protei... 27 1.1
4KR510_HUMAN (Q6L8G5) Keratin-associated protein 5-10 (Keratin-as... 29 2.3
5KRA52_HUMAN (Q701N4) Keratin-associated protein 5-2 (Keratin-ass... 29 3.0
6HSP90_EIMTE (O44001) Heat shock protein 90 28 4.0
7EPL1_ASPFU (Q4WDF1) Enhancer of polycomb-like protein 1 28 4.0
8KR415_HUMAN (Q9BYQ5) Keratin-associated protein 4-15 (Keratin-as... 28 5.2
9SPA4L_HUMAN (Q8TC36) Sperm-associated antigen 4-like protein (Te... 28 5.2
10CAF1A_YERPE (P26949) F1 capsule-anchoring protein precursor 28 6.8
11Y208_BACHD (Q9KGA4) Hypothetical protein BH0208 28 6.8
12Y869_BACLD (Q65MB1) Putative metal-dependent hydrolase BLi00869/... 27 8.9
13V002_FOWPV (Q9ICF9) Hypothetical protein FPV002/FPV259 27 8.9
14KRA47_HUMAN (Q9BYR0) Keratin-associated protein 4-7 (Keratin-ass... 27 8.9

>EX7L_XANAC (Q8PJW7) Probable exodeoxyribonuclease VII large subunit (EC|
           3.1.11.6) (Exonuclease VII large subunit)
          Length = 445

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = +3

Query: 15  HILGLKWRRITRSATKL*THNPKQQTDRWAQISILLHLQSTGSLKQQHEQRQVEGITDRL 194
           H+L     R+ R   +L +HNP++      Q    LH Q+    + QH+Q Q+  I   L
Sbjct: 331 HVLERLQARVQRGQAQLQSHNPQRHLAGLQQRLRALHPQAAMQRRLQHDQLQLRRIARSL 390



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>NPT2B_HUMAN (O95436) Sodium-dependent phosphate transport protein 2B|
           (Sodium/phosphate cotransporter 2B) (Na(+)/Pi
           cotransporter 2B) (Sodium-phosphate transport protein
           2B) (Na(+)-dependent phosphate cotransporter 2B)
           (NaPi-2b) (Solute carrier family 34
          Length = 690

 Score = 27.3 bits (59), Expect(2) = 1.1
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -2

Query: 169 CRCSCCCFRLPVLCRCSRIEICAHLSVCC 83
           C C  CC    +LC C +   C   S CC
Sbjct: 620 CCCRVCCRACCLLCGCPK---CCRCSKCC 645



 Score = 21.6 bits (44), Expect(2) = 1.1
 Identities = 17/57 (29%), Positives = 24/57 (42%)
 Frame = -3

Query: 369 FFVPCKKTFAKTRCGHHYARAVGSGIDFIFVSASRMLLPLSFFSRVLRRVQKNRNFL 199
           FF+     F  +  G      VG  + FI +    + L  S   RVL +  +N NFL
Sbjct: 537 FFLIPLTVFGLSLAGWRVLVGVGVPVVFIIILVLCLRLLQSRCPRVLPKKLQNWNFL 593



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>NPT2B_PONPY (Q5REV9) Sodium-dependent phosphate transport protein 2B|
           (Sodium/phosphate cotransporter 2B) (Na(+)/Pi
           cotransporter 2B) (Sodium-phosphate transport protein
           2B) (Na(+)-dependent phosphate cotransporter 2B)
           (NaPi-2b) (Solute carrier family 34
          Length = 689

 Score = 27.3 bits (59), Expect(2) = 1.1
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -2

Query: 169 CRCSCCCFRLPVLCRCSRIEICAHLSVCC 83
           C C  CC    +LC C +   C   S CC
Sbjct: 619 CCCRVCCRACCLLCGCPK---CCRCSKCC 644



 Score = 21.6 bits (44), Expect(2) = 1.1
 Identities = 17/57 (29%), Positives = 24/57 (42%)
 Frame = -3

Query: 369 FFVPCKKTFAKTRCGHHYARAVGSGIDFIFVSASRMLLPLSFFSRVLRRVQKNRNFL 199
           FF+     F  +  G      VG  + FI +    + L  S   RVL +  +N NFL
Sbjct: 536 FFLIPLTVFGLSLAGWRVLVGVGVPVVFIIILVLCLRLLQSRCPRVLPKKLQNWNFL 592



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>KR510_HUMAN (Q6L8G5) Keratin-associated protein 5-10 (Keratin-associated|
           protein 5.10) (Ultrahigh sulfur keratin-associated
           protein 5.10)
          Length = 202

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 178 PSTCRCSCCCFRLPVLCRCSRIEICAHLSVCC 83
           P  C+ SCC   +PV C+ S  + C   S CC
Sbjct: 165 PCCCQSSCC---VPVCCQSSCCKPCCCQSSCC 193



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>KRA52_HUMAN (Q701N4) Keratin-associated protein 5-2 (Keratin-associated protein|
           5.2) (Ultrahigh sulfur keratin-associated protein 5.2)
           (Keratin-associated protein 5-8) (Keratin-associated
           protein 5.8)
          Length = 177

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 178 PSTCRCSCCCFRLPVLCRCSRIEICAHLSVCC 83
           P  C+ SCC   +PV C+ S  + C   S CC
Sbjct: 140 PCCCQSSCC---VPVCCQSSCCKPCCCQSNCC 168



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>HSP90_EIMTE (O44001) Heat shock protein 90|
          Length = 713

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 76  IQSNRQTDGHKSLFCCTYKALEV*NSSMNNDKSKELQTD 192
           +Q  ++ D HK L CCT + LE+  S     K +EL+ +
Sbjct: 514 VQQLKEFDNHK-LRCCTKEGLEIDESEEEKKKFEELKAE 551



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>EPL1_ASPFU (Q4WDF1) Enhancer of polycomb-like protein 1|
          Length = 582

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/62 (25%), Positives = 30/62 (48%)
 Frame = +3

Query: 141 SLKQQHEQRQVEGITDRLTEENYGFFVLDEEP*KRNSEVAASERPTRR*SQYPNQPPLRS 320
           ++K   E    + +T       + F  L E+P K+ +E  A++RPT    + P +P  ++
Sbjct: 295 NIKDDDEDLINQKVTSIPARLPHAFANLPEQPKKKPAEAPAAQRPTAPQIRMPQKPGTQA 354

Query: 321 GD 326
            D
Sbjct: 355 AD 356



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>KR415_HUMAN (Q9BYQ5) Keratin-associated protein 4-15 (Keratin-associated|
           protein 4.15) (Ultrahigh sulfur keratin-associated
           protein 4.15) (Fragment)
          Length = 193

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
 Frame = -2

Query: 178 PSTCRCSC----CCFRLPVLCRCSRIEICAHLSVCC 83
           P+ CR SC    CC     + RC R + C   SVCC
Sbjct: 90  PTCCRPSCSISSCCRPSCCVSRCCRSQCCQ--SVCC 123



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>SPA4L_HUMAN (Q8TC36) Sperm-associated antigen 4-like protein (Testis and|
           spermatogenesis-related gene 4 protein)
          Length = 379

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 184 VIPSTCRCSCCCFRLPVLCRCSRIEICAHLSVCCFGLWVYN 62
           V+ +TCRC   C +L        +E    L +C FG W+++
Sbjct: 87  VLFNTCRCKLLCQKL--------MEKTGILLLCAFGFWMFS 119



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>CAF1A_YERPE (P26949) F1 capsule-anchoring protein precursor|
          Length = 833

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 1   GLIQHTFWD*NGDGSPGALQNYKPTIQSNRQTDGHKSL 114
           G++    WD   DG P    NY   +Q+ +  +G KSL
Sbjct: 148 GIMPMQLWD---DGIPALFMNYNTNMQTRKFREGGKSL 182



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>Y208_BACHD (Q9KGA4) Hypothetical protein BH0208|
          Length = 459

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 108 ISILLHLQSTGSLKQQHEQRQVEGITDRL 194
           + I+LHL   G  K++  +++VEGI D L
Sbjct: 422 VGIVLHLMLIGLKKEELTEKEVEGIKDDL 450



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>Y869_BACLD (Q65MB1) Putative metal-dependent hydrolase|
           BLi00869/BLi00870/BL03027 (EC 3.-.-.-)
          Length = 176

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 382 ETPRLLRSMQENICQNKMRSPLRKGGW 302
           + P LLRS    + + ++ +P R GGW
Sbjct: 31  QAPHLLRSAAAELNEEQLDTPYRTGGW 57



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>V002_FOWPV (Q9ICF9) Hypothetical protein FPV002/FPV259|
          Length = 222

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -2

Query: 187 SVIPSTCRC-SCCCFRLPVLCRCSRIEICAHLSVCCF 80
           SV P+TC+C  C  +   V C C    + +    CC+
Sbjct: 24  SVRPATCKCVHCLLYPFEVCCECMSETLDSLEHSCCY 60



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>KRA47_HUMAN (Q9BYR0) Keratin-associated protein 4-7 (Keratin-associated protein|
           4.7) (Ultrahigh sulfur keratin-associated protein 4.7)
          Length = 210

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = -2

Query: 181 IPSTCRCSCCCFRLPVLCRCSRIEICAHLSVCC 83
           I S CR SCC      + RC R + C   SVCC
Sbjct: 116 ISSCCRPSCC------VSRCCRPQCCQ--SVCC 140


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,976,179
Number of Sequences: 219361
Number of extensions: 1246322
Number of successful extensions: 3214
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3209
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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