ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl31d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 44 0.24
2gb|AC169385.2| Mus musculus BAC clone RP23-247C1 from chromosome... 42 0.96
3gb|AC149266.1| Solanum demissum chromosome 5 clone PGEC872C13 ma... 42 0.96
4gb|AC149267.1| Solanum demissum chromosome 5 clone PGEC747E24 ma... 42 0.96
5gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.96
6gb|AC119813.16| Mus musculus chromosome 14, clone RP23-298L20, c... 42 0.96
7emb|AL160406.8| Human DNA sequence from clone RP3-493L23 on chro... 42 0.96
8gb|AC154513.2| Mus musculus BAC clone RP24-72F2 from chromosome ... 42 0.96
9gb|AC154504.2| Mus musculus BAC clone RP24-92H14 from chromosome... 42 0.96
10dbj|AK053495.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 42 0.96
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.96
12dbj|AK105718.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.96
13gb|AC166328.4| Mus musculus BAC clone RP23-31H5 from chromosome ... 42 0.96
14gb|AY722919.2| Borrelia garinii PBi variable plasmid segment G1M... 40 3.8
15ref|NM_001014289.1| Danio rerio eukaryotic translation initiatio... 40 3.8
16gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.8
17gb|AC117750.7| Mus musculus chromosome 8, clone RP24-325F22, com... 40 3.8
18gb|AC125444.9| Mus musculus chromosome 1, clone RP24-499L20, com... 40 3.8
19gb|AC106595.9| Rattus norvegicus 7 BAC CH230-237N20 (Children's ... 40 3.8
20gb|AC161180.3| Mus musculus chromosome 1, clone RP23-149C6, comp... 40 3.8
21gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 3.8
22emb|AL672277.20| Human DNA sequence from clone RP11-309M23 on ch... 40 3.8
23emb|CR450808.5| Zebrafish DNA sequence from clone DKEYP-55H4 in ... 40 3.8
24emb|CR848717.7| Zebrafish DNA sequence from clone DKEY-148B12 in... 40 3.8
25emb|BX571700.8| Zebrafish DNA sequence from clone CH211-168K14 i... 40 3.8
26emb|CR457443.5| Zebrafish DNA sequence from clone CH211-202J20 i... 40 3.8
27gb|AF509470.1| Rice grassy stunt virus segment RNA1, complete se... 40 3.8
28dbj|AK136222.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 40 3.8
29gb|AC171275.2| Gallus gallus BAC clone CH261-87A5 from chromosom... 40 3.8
30emb|BX855604.5| Zebrafish DNA sequence from clone CH211-284P4, c... 40 3.8
31emb|BX890556.7| Zebrafish DNA sequence from clone CH211-243O12, ... 40 3.8
32dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
33emb|BX815564.1|CNS0AE0Y Arabidopsis thaliana Full-length cDNA Co... 40 3.8
34gb|AC068138.6| Homo sapiens BAC clone RP11-813K12 from 2, comple... 40 3.8
35dbj|AB096100.1| Danio rerio mRNA for eIF4G-related protein NAT1A... 40 3.8
36gb|AC005322.2|T7A14 Arabidopsis thaliana chromosome 1 BAC T7A14 ... 40 3.8
37dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 40 3.8
38gb|AC110769.2| Homo sapiens BAC clone RP11-141B14 from 2, comple... 40 3.8
39gb|AC092835.4| Homo sapiens BAC clone RP11-11P22 from 2, complet... 40 3.8
40emb|BX321894.8| Zebrafish DNA sequence from clone DKEYP-56B7 in ... 40 3.8
41emb|BX842663.3| Mouse DNA sequence from clone RP23-176P20 on chr... 40 3.8
42gb|BC059195.1| Danio rerio eukaryotic translation initiation fac... 40 3.8
43dbj|AK068057.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.8
44emb|BX957285.9| Zebrafish DNA sequence from clone CH211-160M18 i... 40 3.8
45dbj|AB032180.1| Rice grassy stunt virus RNA 1, complete sequence 40 3.8
46dbj|AB009656.1| Rice grassy stunt virus genomic RNA, complete se... 40 3.8
47emb|AL772273.11| Zebrafish DNA sequence from clone CH211-153P8, ... 40 3.8
48emb|CR394550.5| Zebrafish DNA sequence from clone CH211-231O11 i... 40 3.8
49gb|AC159642.2| Mus musculus BAC clone RP23-415N22 from chromosom... 40 3.8
50gb|AC139186.4| Mus musculus BAC clone RP24-92D20 from 8, complet... 40 3.8
51gb|AC173486.2| Mus musculus BAC clone RP23-18O16 from chromosome... 40 3.8
52emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 40 3.8
53gb|AC168066.4| Mus musculus BAC clone RP23-134F19 from chromosom... 40 3.8
54emb|AL844581.7| Mouse DNA sequence from clone RP23-146O7 on chro... 40 3.8
55gb|AC124539.4| Mus musculus BAC clone RP23-359M14 from chromosom... 40 3.8
56gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.8 
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 242    ccccagctggtggtgttgttgcggga 267
              |||||||||||||||||| |||||||
Sbjct: 772795 ccccagctggtggtgttggtgcggga 772770
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>gb|AC169385.2| Mus musculus BAC clone RP23-247C1 from chromosome 16, complete sequence
          Length = 206814

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 20    cctttttcttttctccccttttaattgaa 48
             |||| ||||||||||| ||||||||||||
Sbjct: 51879 ccttattcttttctccacttttaattgaa 51907
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>gb|AC149266.1| Solanum demissum chromosome 5 clone PGEC872C13 map MAP_LOC, complete
            sequence
          Length = 100564

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 24   tttcttttctccccttttaattgaa 48
            ||||||||||||||| |||||||||
Sbjct: 3627 tttcttttctcccctattaattgaa 3603
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>gb|AC149267.1| Solanum demissum chromosome 5 clone PGEC747E24 map MAP_LOC, complete
            sequence
          Length = 92340

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 24   tttcttttctccccttttaattgaa 48
            ||||||||||||||| |||||||||
Sbjct: 1985 tttcttttctcccctattaattgaa 2009
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>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0108E17, complete sequence
          Length = 139829

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 100   aacaagcattattttcttccactgtaagactgtatacaggc 140
             ||||||||||||||| ||  | || ||||||||||||||||
Sbjct: 55101 aacaagcattattttttttgattgcaagactgtatacaggc 55061
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>gb|AC119813.16| Mus musculus chromosome 14, clone RP23-298L20, complete sequence
          Length = 169207

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 22  tttttcttttctcccctttta 42
           |||||||||||||||||||||
Sbjct: 194 tttttcttttctcccctttta 174
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>emb|AL160406.8| Human DNA sequence from clone RP3-493L23 on chromosome 6, complete
             sequence
          Length = 60901

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 121   ctgtaagactgtatacaggct 141
             |||||||||||||||||||||
Sbjct: 57568 ctgtaagactgtatacaggct 57548
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>gb|AC154513.2| Mus musculus BAC clone RP24-72F2 from chromosome 16, complete sequence
          Length = 197862

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 20     cctttttcttttctccccttttaattgaa 48
              |||| ||||||||||| ||||||||||||
Sbjct: 153882 ccttattcttttctccacttttaattgaa 153910
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>gb|AC154504.2| Mus musculus BAC clone RP24-92H14 from chromosome 14, complete sequence
          Length = 234665

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 22    tttttcttttctcccctttta 42
             |||||||||||||||||||||
Sbjct: 44857 tttttcttttctcccctttta 44877
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>dbj|AK053495.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
           library, clone:E130102O08 product:unclassifiable, full
           insert sequence
          Length = 2000

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 242 ccccagctggtggtgttgttg 262
           |||||||||||||||||||||
Sbjct: 171 ccccagctggtggtgttgttg 151
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 100      aacaagcattattttcttccactgtaagactgtatacaggc 140
                ||||||||||||||| ||  | || ||||||||||||||||
Sbjct: 24986248 aacaagcattattttttttgattgcaagactgtatacaggc 24986208



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 22      tttttcttttctcccctttt 41
               ||||||||||||||||||||
Sbjct: 9338978 tttttcttttctcccctttt 9338997
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>dbj|AK105718.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-F09, full
            insert sequence
          Length = 2478

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 100  aacaagcattattttcttccactgtaagactgtatacaggc 140
            ||||||||||||||| ||  | || ||||||||||||||||
Sbjct: 2332 aacaagcattattttttttgattgcaagactgtatacaggc 2292
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>gb|AC166328.4| Mus musculus BAC clone RP23-31H5 from chromosome 5, complete sequence
          Length = 215189

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 242    ccccagctggtggtgttgttg 262
              |||||||||||||||||||||
Sbjct: 101899 ccccagctggtggtgttgttg 101919
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>gb|AY722919.2| Borrelia garinii PBi variable plasmid segment G1M1b13a11.r1, WORKING
             DRAFT SEQUENCE
          Length = 16203

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    gtatccctttttcttttctc 34
             ||||||||||||||||||||
Sbjct: 12025 gtatccctttttcttttctc 12006
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>ref|NM_001014289.1| Danio rerio eukaryotic translation initiation factor 4, gamma 2a
           (eif4g2a), mRNA
          Length = 3967

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 22  tttttcttttctcccctttt 41
           ||||||||||||||||||||
Sbjct: 95  tttttcttttctcccctttt 114
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>gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0537C11,
              complete sequence
          Length = 146677

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     tttttcttttctcccctttt 41
              ||||||||||||||||||||
Sbjct: 110923 tttttcttttctcccctttt 110942
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>gb|AC117750.7| Mus musculus chromosome 8, clone RP24-325F22, complete sequence
          Length = 187432

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     ctttttcttttctccccttt 40
              ||||||||||||||||||||
Sbjct: 105547 ctttttcttttctccccttt 105528
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>gb|AC125444.9| Mus musculus chromosome 1, clone RP24-499L20, complete sequence
          Length = 162238

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    ccccagctggtggtgttgtt 261
              ||||||||||||||||||||
Sbjct: 156965 ccccagctggtggtgttgtt 156984
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>gb|AC106595.9| Rattus norvegicus 7 BAC CH230-237N20 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 214961

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     ttttcttttctcccctttta 42
              ||||||||||||||||||||
Sbjct: 162968 ttttcttttctcccctttta 162987
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>gb|AC161180.3| Mus musculus chromosome 1, clone RP23-149C6, complete sequence
          Length = 215599

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   ccccagctggtggtgttgtt 261
             ||||||||||||||||||||
Sbjct: 89680 ccccagctggtggtgttgtt 89661
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      tttttcttttctcccctttt 41
               ||||||||||||||||||||
Sbjct: 4574204 tttttcttttctcccctttt 4574185
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>emb|AL672277.20| Human DNA sequence from clone RP11-309M23 on chromosome X contains a
             novel gene and a ribosomal protein L14 (RPL14) pseudogene,
             complete sequence
          Length = 131682

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   agagacaccgttcagcccac 222
             ||||||||||||||||||||
Sbjct: 80826 agagacaccgttcagcccac 80807
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>emb|CR450808.5| Zebrafish DNA sequence from clone DKEYP-55H4 in linkage group 25,
              complete sequence
          Length = 169887

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 22     tttttcttttctccccttttaatt 45
              |||||||||| |||||||||||||
Sbjct: 154460 tttttcttttttccccttttaatt 154437
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>emb|CR848717.7| Zebrafish DNA sequence from clone DKEY-148B12 in linkage group 5,
              complete sequence
          Length = 207800

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 22     tttttcttttctccccttttaatt 45
              |||||||||| |||||||||||||
Sbjct: 183950 tttttcttttttccccttttaatt 183927
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>emb|BX571700.8| Zebrafish DNA sequence from clone CH211-168K14 in linkage group 9,
             complete sequence
          Length = 137898

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 22    tttttcttttctccccttttaatt 45
             |||||||||| |||||||||||||
Sbjct: 60409 tttttcttttttccccttttaatt 60432
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>emb|CR457443.5| Zebrafish DNA sequence from clone CH211-202J20 in linkage group 15,
              complete sequence
          Length = 146746

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 22     tttttcttttctccccttttaatt 45
              |||||||||| |||||||||||||
Sbjct: 119691 tttttcttttttccccttttaatt 119714
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>gb|AF509470.1| Rice grassy stunt virus segment RNA1, complete sequence
          Length = 9764

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 108  ttattttcttccactgtaagactg 131
            ||||||||||||| ||||||||||
Sbjct: 8849 ttattttcttccattgtaagactg 8826
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>dbj|AK136222.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
            enriched library, clone:7420483G11
            product:unclassifiable, full insert sequence
          Length = 1707

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 108  ttattttcttccactgtaagactg 131
            |||||||||||| |||||||||||
Sbjct: 1229 ttattttcttcctctgtaagactg 1252
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>gb|AC171275.2| Gallus gallus BAC clone CH261-87A5 from chromosome ul, complete sequence
          Length = 206820

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     atccctttttcttttctccc 36
              ||||||||||||||||||||
Sbjct: 111448 atccctttttcttttctccc 111467
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>emb|BX855604.5| Zebrafish DNA sequence from clone CH211-284P4, complete sequence
          Length = 152761

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 22    tttttcttttctccccttttaatt 45
             |||||||||| |||||||||||||
Sbjct: 79705 tttttcttttttccccttttaatt 79682
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>emb|BX890556.7| Zebrafish DNA sequence from clone CH211-243O12, complete sequence
          Length = 73520

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 22    tttttcttttctccccttttaatt 45
             |||||||||| |||||||||||||
Sbjct: 31753 tttttcttttttccccttttaatt 31730
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      tttttcttttctcccctttt 41
               ||||||||||||||||||||
Sbjct: 4574319 tttttcttttctcccctttt 4574300
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>emb|BX815564.1|CNS0AE0Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS71ZF07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1501

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 91  atctgttacaacaagcatta 110
           ||||||||||||||||||||
Sbjct: 930 atctgttacaacaagcatta 911
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>gb|AC068138.6| Homo sapiens BAC clone RP11-813K12 from 2, complete sequence
          Length = 168698

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 22    tttttcttttctccccttttaatt 45
             |||||||||| |||||||||||||
Sbjct: 68648 tttttcttttttccccttttaatt 68671
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>dbj|AB096100.1| Danio rerio mRNA for eIF4G-related protein NAT1A, complete cds
          Length = 4030

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 22  tttttcttttctcccctttt 41
           ||||||||||||||||||||
Sbjct: 158 tttttcttttctcccctttt 177
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>gb|AC005322.2|T7A14 Arabidopsis thaliana chromosome 1 BAC T7A14 sequence, complete sequence
          Length = 54157

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    atctgttacaacaagcatta 110
             ||||||||||||||||||||
Sbjct: 18802 atctgttacaacaagcatta 18783
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>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence
          Length = 3288558

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 247     gctggtggtgttgttgcgggaacc 270
               ||||||| ||||||||||||||||
Sbjct: 1621444 gctggtgctgttgttgcgggaacc 1621467
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>gb|AC110769.2| Homo sapiens BAC clone RP11-141B14 from 2, complete sequence
          Length = 135317

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 18    tccctttttcttttctcccctttt 41
             |||||||||||||||| |||||||
Sbjct: 53909 tccctttttcttttctaccctttt 53932
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>gb|AC092835.4| Homo sapiens BAC clone RP11-11P22 from 2, complete sequence
          Length = 158404

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 13    ctgtatccctttttcttttctccc 36
             |||||||||| |||||||||||||
Sbjct: 24991 ctgtatccctgtttcttttctccc 24968
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>emb|BX321894.8| Zebrafish DNA sequence from clone DKEYP-56B7 in linkage group 19,
              complete sequence
          Length = 181789

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 22     tttttcttttctccccttttaatt 45
              |||||||||| |||||||||||||
Sbjct: 119646 tttttcttttttccccttttaatt 119669
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>emb|BX842663.3| Mouse DNA sequence from clone RP23-176P20 on chromosome 2, complete
             sequence
          Length = 195115

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    ttttcttttctcccctttta 42
             ||||||||||||||||||||
Sbjct: 34887 ttttcttttctcccctttta 34868
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>gb|BC059195.1| Danio rerio eukaryotic translation initiation factor 4, gamma 2a,
           mRNA (cDNA clone IMAGE:3818643)
          Length = 4545

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 22  tttttcttttctcccctttt 41
           ||||||||||||||||||||
Sbjct: 92  tttttcttttctcccctttt 111
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>dbj|AK068057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130C18,
          full insert sequence
          Length = 1136

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 22 tttttcttttctcccctttt 41
          ||||||||||||||||||||
Sbjct: 45 tttttcttttctcccctttt 26
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>emb|BX957285.9| Zebrafish DNA sequence from clone CH211-160M18 in linkage group 10,
              complete sequence
          Length = 156078

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 22     tttttcttttctccccttttaatt 45
              |||||||||| |||||||||||||
Sbjct: 108016 tttttcttttttccccttttaatt 108039
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>dbj|AB032180.1| Rice grassy stunt virus RNA 1, complete sequence
          Length = 9760

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 108  ttattttcttccactgtaagactg 131
            ||||||||||||| ||||||||||
Sbjct: 8850 ttattttcttccattgtaagactg 8827
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>dbj|AB009656.1| Rice grassy stunt virus genomic RNA, complete sequence of RNA1
          Length = 9760

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 108  ttattttcttccactgtaagactg 131
            ||||||||||||| ||||||||||
Sbjct: 8850 ttattttcttccattgtaagactg 8827
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>emb|AL772273.11| Zebrafish DNA sequence from clone CH211-153P8, complete sequence
          Length = 171830

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 22    tttttcttttctccccttttaatt 45
             |||||||||| |||||||||||||
Sbjct: 28530 tttttcttttttccccttttaatt 28507
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>emb|CR394550.5| Zebrafish DNA sequence from clone CH211-231O11 in linkage group 10,
              complete sequence
          Length = 170825

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 22     tttttcttttctccccttttaatt 45
              ||||||||||| ||||||||||||
Sbjct: 149081 tttttcttttccccccttttaatt 149104
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>gb|AC159642.2| Mus musculus BAC clone RP23-415N22 from chromosome 12, complete sequence
          Length = 197100

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     ttttcttttctcccctttta 42
              ||||||||||||||||||||
Sbjct: 175267 ttttcttttctcccctttta 175286
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>gb|AC139186.4| Mus musculus BAC clone RP24-92D20 from 8, complete sequence
          Length = 206436

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 108    ttattttcttccactgtaagactg 131
              |||||||||||| |||||||||||
Sbjct: 110376 ttattttcttcctctgtaagactg 110399
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>gb|AC173486.2| Mus musculus BAC clone RP23-18O16 from chromosome 16, complete sequence
          Length = 208322

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    tttttcttttctcccctttt 41
             ||||||||||||||||||||
Sbjct: 72750 tttttcttttctcccctttt 72731
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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 23      ttttcttttctccccttttaattg 46
               |||||||||||||| |||||||||
Sbjct: 2414969 ttttcttttctcccgttttaattg 2414992
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>gb|AC168066.4| Mus musculus BAC clone RP23-134F19 from chromosome 16, complete
             sequence
          Length = 198238

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    tttttcttttctcccctttt 41
             ||||||||||||||||||||
Sbjct: 80882 tttttcttttctcccctttt 80901
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>emb|AL844581.7| Mouse DNA sequence from clone RP23-146O7 on chromosome 2, complete
              sequence
          Length = 207639

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     tttttcttttctcccctttt 41
              ||||||||||||||||||||
Sbjct: 152720 tttttcttttctcccctttt 152739
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>gb|AC124539.4| Mus musculus BAC clone RP23-359M14 from chromosome 12, complete
             sequence
          Length = 183684

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    ttttcttttctcccctttta 42
             ||||||||||||||||||||
Sbjct: 53934 ttttcttttctcccctttta 53953
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>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09,
             complete sequence
          Length = 148894

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    tttttcttttctcccctttt 41
             ||||||||||||||||||||
Sbjct: 15159 tttttcttttctcccctttt 15140


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,351,225
Number of Sequences: 3902068
Number of extensions: 3351225
Number of successful extensions: 68708
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68522
Number of HSP's gapped (non-prelim): 186
length of query: 290
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 268
effective length of database: 17,147,199,772
effective search space: 4595449538896
effective search space used: 4595449538896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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