ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl31d04 |
|---|---|
| Clone Library Name | barley_pub |
>ATG26_NEUCR (Q7S1I0) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)| (Autophagy-related protein 26) Length = 1553 Score = 32.3 bits (72), Expect = 0.27 Identities = 27/99 (27%), Positives = 39/99 (39%) Frame = +3 Query: 3 EDDDYIHISFQHTGMAFSTPAHPRTVKNQDPVHDGLTKQCDAPNKH*RRSELASDEGEFN 182 ED+D + H M F+ P T +N++ G K S FN Sbjct: 145 EDEDDVP---NHMAMTFAGPGIKGTARNRETA--GTVKSL-------------SQTVVFN 186 Query: 183 MPPEVSSARPIPVLFHQQQWPRRKIWSVTPSLSRGCSRH 299 PP ++ P H+++ P K+ PSLSR S H Sbjct: 187 KPPASATVDAGPSNIHRRRLPGHKLLQSVPSLSRLSSSH 225
>FPPS2_LUPAL (P49352) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)| (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 32.0 bits (71), Expect = 0.36 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 5/57 (8%) Frame = -3 Query: 328 EVHVSSRLG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 173 E+ ++S LG C+E + V D I RRGH CW+ +G+ G +L + Sbjct: 71 EIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGHPCWFRVPKVGMIAPNDGVVLRN 127
>FPPS2_ARATH (Q43315) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)| (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 31.6 bits (70), Expect = 0.47 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Frame = -3 Query: 328 EVHVSSRLG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 173 E +S LG C+E + V D I RRG CW+ K +G+ + G +L + Sbjct: 71 ETFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRKPKVGMIAINDGILLRN 127
>FPPS1_ARATH (Q09152) Farnesyl pyrophosphate synthetase 1, mitochondrial| precursor (FPP synthetase 1) (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 384 Score = 30.8 bits (68), Expect = 0.80 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Frame = -3 Query: 328 EVHVSSRLG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 173 EV +S LG C+E + V D I RRG CW+ +G+ + G +L + Sbjct: 113 EVFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPQVGMVAINDGILLRN 169
>FPPS_CHICK (P08836) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 367 Score = 30.8 bits (68), Expect = 0.80 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%) Frame = -3 Query: 307 LG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 173 +G C+E + V D I RRG CW+ K G+GL + +L S Sbjct: 102 VGWCIELFQAFFLVADDIMDQSLTRRGQLCWYKKEGVGLDAINDSFLLES 151
>FPPS_ARTAN (P49350) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 343 Score = 30.8 bits (68), Expect = 0.80 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Frame = -3 Query: 328 EVHVSSRLG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 173 E+ +SS LG C+E + V D I RRG CW+ +G+ G +L + Sbjct: 72 EIFLSSALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAANDGILLRN 128
>FPPS_HUMAN (P14324) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 353 Score = 30.8 bits (68), Expect = 0.80 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 5/50 (10%) Frame = -3 Query: 307 LG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 173 +G C+E + V D I RRG CW+ K G+GL + +L + Sbjct: 88 VGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEA 137
>PEX5_MOUSE (O09012) Peroxisomal targeting signal 1 receptor (Peroxismore| receptor 1) (Peroxisomal C-terminal targeting signal import receptor) (PTS1-BP) (Peroxin-5) (PTS1 receptor) (PXR1P) (PTS1R) Length = 639 Score = 30.8 bits (68), Expect = 0.80 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -1 Query: 405 GQGDAQAGQWSANDVDDSAVQDAYVQKYTFP 313 G G AQA QW+A + +A+V ++T P Sbjct: 235 GSGGAQAEQWAAEFIQQQGTSEAWVDQFTRP 265
>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)| Length = 606 Score = 30.4 bits (67), Expect = 1.0 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +1 Query: 139 TRDVPN*HPTRVSSTCPRKLAPQGRSPSYSTNSNGPDGRSGRSLPAC 279 T +P HP+R S P P R PS + + P GRS+ +C Sbjct: 547 TGGMPPHHPSRPDSASPPLPLPLARPPSTPSPTLNPGSPPGRSVDSC 593
>FMT_ENTFA (Q82ZD8) Methionyl-tRNA formyltransferase (EC 2.1.2.9)| Length = 313 Score = 30.4 bits (67), Expect = 1.0 Identities = 20/64 (31%), Positives = 26/64 (40%) Frame = +3 Query: 192 EVSSARPIPVLFHQQQWPRRKIWSVTPSLSRGCSRHHPNREETCTSAHTRLGPRCRRHRW 371 +V RP P F Q KIW+VTP ET TSA + R ++ W Sbjct: 224 QVRGMRPWPTAFTTYQGTNWKIWAVTP------------LTETTTSAPGTIIQRSKKALW 271 Query: 372 LTTG 383 + G Sbjct: 272 IACG 275
>3BP1_MOUSE (P55194) SH3 domain-binding protein 1 (3BP-1)| Length = 601 Score = 30.4 bits (67), Expect = 1.0 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = -2 Query: 401 RVTRRPASGQPTMSTTARSKTRMCRSTRFLPVGVMSRASPR 279 R T+RPA +PTM S TR LP G +S +P+ Sbjct: 475 RKTKRPAPARPTMPPPQPSSTRSSPPAPSLPPGSVSPGTPQ 515
>FPPS_MOUSE (Q920E5) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) (Cholesterol-regulated 39 kDa protein) (CR 39) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 353 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 5/50 (10%) Frame = -3 Query: 307 LG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 173 +G C+E + V+D I RRG CW+ K GIGL + +L + Sbjct: 88 VGWCVELLQAFFLVSDDIMDSSLTRRGQICWYQKPGIGLDAINDALLLEA 137
>KLEG1_ECOLI (Q52282) Putative protein kleG| Length = 87 Score = 30.0 bits (66), Expect = 1.4 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 7/60 (11%) Frame = +3 Query: 240 WPRRKI-WSVTPSLSRGCSRHHPNREETCTSAHTRLGPRCRRHRWL-TTG-----RPARH 398 WP + W+ P R SR C++ TR GPR R RW+ TTG RP RH Sbjct: 20 WPSSRTGWACLPR--RCASRRRWRAGRPCST--TRTGPRFARARWIPTTGDRRGRRPQRH 75
>RFC1_SCHPO (O60182) Probable activator 1 subunit 1 (Replication factor C| subunit 1) (Replication factor C1) Length = 934 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/59 (30%), Positives = 29/59 (49%) Frame = -2 Query: 401 RVTRRPASGQPTMSTTARSKTRMCRSTRFLPVGVMSRASPRQAGSDRPDLPSGPLLLVE 225 R TR+PA + STT++SK+ +T S+ PR + L + PL+ V+ Sbjct: 150 RATRKPAQPKAEKSTTSKSKSHTTTATTHTSRSSKSKGLPRFSDEVSQALKNVPLIDVD 208
>FPPS1_LUPAL (P49351) Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1)| (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Frame = -3 Query: 328 EVHVSSRLG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 173 E+ ++S LG C+E + V D I RRG CW+ +G+ G +L + Sbjct: 71 EIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAANDGVLLRN 127
>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor| Length = 3695 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/59 (30%), Positives = 22/59 (37%) Frame = +1 Query: 184 CPRKLAPQGRSPSYSTNSNGPDGRSGRSLPACRGDARDITPTGRKRVLLHIRVLDRAVV 360 C R P GR ++ N P G SG C + P G +H V D VV Sbjct: 2114 CRRCQCPGGRCDPHTGRCNCPPGLSGERCDTCSQQHQVPVPGGPVGHSIHCEVCDHCVV 2172
>FPPS_RAT (P05369) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) (Cholesterol-regulated 39 kDa protein) (CR 39) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 353 Score = 29.3 bits (64), Expect = 2.3 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%) Frame = -3 Query: 307 LG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 173 +G C+E + V D I RRG CW+ K GIGL + +L + Sbjct: 88 VGWCVELLQAFFLVLDDIMDSSYTRRGQICWYQKPGIGLDAINDALLLEA 137
>FPPS_NEUCR (Q92250) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 347 Score = 29.3 bits (64), Expect = 2.3 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -3 Query: 256 IFRRGHCCWWNKTGIGLAELTSGGMLNS 173 I RRG CW+ + G+G+ + ML S Sbjct: 102 ITRRGKPCWYRQEGVGMVAINDAFMLES 129
>FPPS_GIBFU (Q92235) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 347 Score = 29.3 bits (64), Expect = 2.3 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -3 Query: 256 IFRRGHCCWWNKTGIGLAELTSGGMLNS 173 I RRG CW+ + G+G+ + ML S Sbjct: 102 ITRRGQPCWYRQEGVGMIAINDAFMLES 129
>WBP11_BRARE (Q6P0D5) WW domain-binding protein 11 (WBP-11)| Length = 640 Score = 29.3 bits (64), Expect = 2.3 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +1 Query: 181 TCPRKLAPQGRSPSYSTNSNGPDGRSGRSLPACRGDARDITPTGRKR 321 + P + P+ +SP+ S+N P G + + P A + PT KR Sbjct: 496 SAPPSIVPRQKSPAASSNEGAPSGSALQMPPPPGTTANPLAPTIEKR 542
>LRIG1_HUMAN (Q96JA1) Leucine-rich repeats and immunoglobulin-like domains protein| 1 precursor (LIG-1) Length = 1093 Score = 29.3 bits (64), Expect = 2.3 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 4/72 (5%) Frame = +1 Query: 160 HPTRVSSTCPRKLAPQGRSPSYSTNSNGPDGRSGR----SLPACRGDARDITPTGRKRVL 327 HP VS + AP G P S + P + R S P C+G + P+ R+L Sbjct: 948 HPQPVSRDSAQPSAPNGPEPGGSDQEHSPHHQCSRTAAGSCPECQG---SLYPSNHDRML 1004 Query: 328 LHIRVLDRAVVD 363 ++ A +D Sbjct: 1005 TAVKKKPMASLD 1016
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 29.3 bits (64), Expect = 2.3 Identities = 19/61 (31%), Positives = 23/61 (37%) Frame = +1 Query: 139 TRDVPN*HPTRVSSTCPRKLAPQGRSPSYSTNSNGPDGRSGRSLPACRGDARDITPTGRK 318 TRDV + P R T RK G T GP R GR + A + T K Sbjct: 128 TRDVTSRRPARAGQTGTRKSPQDGAWARGPTTRTGPASRGGRGGATSKSTAGARSSTAGK 187 Query: 319 R 321 + Sbjct: 188 K 188
>FPPS_HELAN (O64905) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 341 Score = 29.3 bits (64), Expect = 2.3 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Frame = -3 Query: 328 EVHVSSRLG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 173 E+ ++S LG C+E + V D I RRG CW+ +G+ G +L + Sbjct: 71 EIFLASALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRLPKVGMIAANDGLILRN 127
>YDBH_SCHPO (Q10367) Hypothetical protein C22E12.17c in chromosome I| Length = 486 Score = 28.9 bits (63), Expect = 3.0 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = -2 Query: 374 QPTMSTTARSKTRMCRSTRFLPVGVMSRASPRQAGSDRP 258 +P ++T +SKT S R P+ SR + + G+ RP Sbjct: 215 RPDSTSTTKSKTSSISSARARPIRASSRPTASKLGASRP 253
>NXL2_NAJNA (P25669) Long neurotoxin 2 (Toxin B)| Length = 71 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/67 (26%), Positives = 28/67 (41%) Frame = +1 Query: 121 VTHQTNTRDVPN*HPTRVSSTCPRKLAPQGRSPSYSTNSNGPDGRSGRSLPACRGDARDI 300 +T ++D PN H + C + +G+ + P R+G + C D D Sbjct: 5 ITPDITSKDCPNGHVCYTKTWCDGFCSSRGKRVDLGCAATCPTVRTGVDIQCCSTDDCDP 64 Query: 301 TPTGRKR 321 PT RKR Sbjct: 65 FPT-RKR 70
>SYP1_YEAST (P25623) Suppressor of yeast profilin deletion| Length = 870 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +1 Query: 130 QTNTRDVPN*HPTRVSSTCPRKLAPQGRSPSYSTNSN 240 Q + + PN TRVSST + + R P+YS++ + Sbjct: 369 QASITETPNNSSTRVSSTATSSIYQKQRRPTYSSSKS 405
>TSH2_MOUSE (Q68FE9) Teashirt homolog 2 (Zinc finger protein 218)| (SDCCAG33-like protein) Length = 1030 Score = 28.5 bits (62), Expect = 4.0 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 6/78 (7%) Frame = +3 Query: 78 VKNQDPVHDGLTKQCDAPNKH*RRSELASDEGE----FNMPPEVSSARPIPVLFHQQQWP 245 VK + D + KQC + H + + EGE P E A P P L +++ Sbjct: 600 VKKETEDKDEVVKQCGKESPHEEATSFSQPEGESFSKIEPPSESRKAEPCP-LKEEEKPQ 658 Query: 246 RRKIWSVTP--SLSRGCS 293 + K + P SL+ GC+ Sbjct: 659 KEKPEPLEPVSSLTNGCA 676
>CWC22_SCHPO (Q9P6R9) Pre-mRNA-splicing factor cwc22 (Complexed with cdc5| protein 22) (Cell cycle control protein cwf22) Length = 834 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/42 (40%), Positives = 22/42 (52%) Frame = +1 Query: 190 RKLAPQGRSPSYSTNSNGPDGRSGRSLPACRGDARDITPTGR 315 R+L+P+GR S + NS RS RG +R TP GR Sbjct: 679 RELSPRGRERSSNRNSYSD---LSRSSSLSRGRSRSYTPEGR 717
>CRYAA_ORYLA (O73919) Alpha crystallin A chain (Fragment)| Length = 145 Score = 28.1 bits (61), Expect = 5.2 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = +1 Query: 235 SNGPDGRSGRSLPACR 282 + GP+GRS RS+P CR Sbjct: 130 AGGPNGRSDRSIPVCR 145
>YAP1_HUMAN (P46937) 65 kDa Yes-associated protein (YAP65)| Length = 454 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = +1 Query: 187 PRKLAPQGRS--PSYSTNSNGPDGRSGRSLPACRGDARDITPTGRKRVLLHIR 339 P + APQG+ PS GP G+ PA A P G + ++H+R Sbjct: 8 PPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQ--IVHVR 58
>ENAM_MOUSE (O55196) Enamelin precursor| Length = 1274 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = +1 Query: 187 PRKLAPQGRSPSYSTNSNGPDGRSGRSLPACRGDARDITPTG 312 P P P STNS PD + +S+P D I TG Sbjct: 237 PEDPPPDDPPPEASTNSTVPDANATQSIPEGGNDTSPIGNTG 278
>VGLB_BHV1P (P17471) Glycoprotein I precursor (Glycoprotein GVP-6)| (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130) Length = 928 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/58 (31%), Positives = 26/58 (44%) Frame = -2 Query: 362 STTARSKTRMCRSTRFLPVGVMSRASPRQAGSDRPDLPSGPLLLVE*DGDRPCGANFR 189 ++ AR++ R+ + RFL G S Q G D LP L+ PC AN + Sbjct: 617 NSNARARRRLLQPPRFLSFGNESEPVEGQLGEDNELLPGRELV-------EPCTANHK 667
>CG030_MOUSE (Q9CWV0) Protein C7orf30 homolog| Length = 228 Score = 28.1 bits (61), Expect = 5.2 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = +3 Query: 189 PEVSSARPIPVLFHQQQW-PRRKIWSVTPSLSRGCSRHHPNREETCTSAHTRLGP 350 P ++S +P L ++W P R +TPSL+RG HH + E T+ RL P Sbjct: 26 PAMASVPWLPRL--AERWLPARPATCLTPSLTRGL--HHGPQPEERTAGDARLQP 76
>FPPS1_PARAR (O24241) Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1)| (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Frame = -3 Query: 328 EVHVSSRLG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 173 E+ +++ LG C+E + V D I RRG CW+ +G+ G +L + Sbjct: 71 EIFLAAALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAANDGIILRN 127
>RGS3_MOUSE (Q9DC04) Regulator of G-protein signaling 3 (RGS3) (C2PA)| Length = 966 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 4/55 (7%) Frame = +3 Query: 255 IWSVTPSLSRGCSRHHPN----REETCTSAHTRLGPRCRRHRWLTTGRPARHPAR 407 +W V P + G P+ R +C S H L P +R + T G P R R Sbjct: 91 VWRVVPQIKPG-----PDGGVLRRASCKSTHDLLSPPNKREKNCTHGAPVRPEQR 140
>RGS3_RAT (P49797) Regulator of G-protein signaling 3 (RGS3) (SRB-RGS)| Length = 967 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 4/55 (7%) Frame = +3 Query: 255 IWSVTPSLSRGCSRHHPN----REETCTSAHTRLGPRCRRHRWLTTGRPARHPAR 407 +W V P + G P+ R +C S H L P +R + T G P R R Sbjct: 91 VWRVVPQIKPG-----PDGGVLRRASCKSTHDLLSPPNKREKNCTHGAPTRPEQR 140
>NXL1_NAJNA (P25668) Long neurotoxin 1 (Toxin A)| Length = 71 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/67 (26%), Positives = 28/67 (41%) Frame = +1 Query: 121 VTHQTNTRDVPN*HPTRVSSTCPRKLAPQGRSPSYSTNSNGPDGRSGRSLPACRGDARDI 300 +T ++D PN H + C + +G+ + P R+G + C D D Sbjct: 5 ITPDITSKDCPNGHVCYTKTWCDGFCSIRGKRVDLGCAATCPTVRTGVDIQCCSTDDCDP 64 Query: 301 TPTGRKR 321 PT RKR Sbjct: 65 FPT-RKR 70
>C87A3_ORYSA (Q7XU38) Cytochrome P450 87A3 (EC 1.14.-.-)| Length = 514 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = -1 Query: 351 AVQDAYVQKYTFPPGWGDVSSIPA 280 A+QD ++ YT P GWG + PA Sbjct: 398 ALQDVEIKGYTIPAGWGIMVCPPA 421
>CHIA1_BACCI (P20533) Chitinase A1 precursor (EC 3.2.1.14)| Length = 699 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/42 (26%), Positives = 18/42 (42%) Frame = -1 Query: 408 TGQGDAQAGQWSANDVDDSAVQDAYVQKYTFPPGWGDVSSIP 283 T G + G W A D ++ Y+ K + W D + +P Sbjct: 355 TCTGGSSVGTWEAGSFDFYDLEANYINKNGYTRYWNDTAKVP 396
>IF2_ZYMMO (Q5NQ27) Translation initiation factor IF-2| Length = 989 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Frame = -2 Query: 395 TRRPASGQPTMSTTARSKT-RMCRSTRFLPVGVMSRASPRQAGSDR 261 TRRPA + RS++ R RF PV R +PR A DR Sbjct: 309 TRRPAKAAAPKAREERSESPRSPAPRRFTPVSPPRREAPRPAMRDR 354
>ZEP2_HUMAN (P31629) Human immunodeficiency virus type I enhancer-binding| protein 2 (HIV-EP2) (MHC-binding protein 2) (MBP-2) Length = 2446 Score = 27.3 bits (59), Expect = 8.8 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = +3 Query: 210 PIPVLFHQQQWPRRKIWSVTPSLSRGCSRHHPNREETCTSAH 335 P P+ H +PR+KI S+ P+ S+ + EE H Sbjct: 140 PFPIHGHSGGYPRKKISSLNPAYSQYSQKSIEQAEEAHKKEH 181
>NMDE4_HUMAN (O15399) Glutamate [NMDA] receptor subunit epsilon 4 precursor| (N-methyl D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D) (EB11) Length = 1336 Score = 27.3 bits (59), Expect = 8.8 Identities = 25/92 (27%), Positives = 31/92 (33%) Frame = +3 Query: 129 PNKH*RRSELASDEGEFNMPPEVSSARPIPVLFHQQQWPRRKIWSVTPSLSRGCSRHHPN 308 P +H S D G + PP +A P+P RR+ GC R HP+ Sbjct: 1191 PPRHLSCSHDGLDGGWWAPPPPPWAAGPLP---------RRRARC-------GCPRSHPH 1234 Query: 309 REETCTSAHTRLGPRCRRHRWLTTGRPARHPA 404 R P RHR G PA Sbjct: 1235 RPRASHRTPAAAAPHHHRHRRAAGGWDLPPPA 1266
>UL66_HCMVA (P16822) Hypothetical protein UL66| Length = 114 Score = 27.3 bits (59), Expect = 8.8 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 10/62 (16%) Frame = +3 Query: 225 FHQQQWPRRKIWSVTPSLSRGCSRHHPNREETCTSAHTRLGPRC----------RRHRWL 374 F ++Q ++ +W V ++S R++ +RE T G C RR RW Sbjct: 46 FLKKQHKKKMMWFVVLTVSFSYYRYYRSRERTARENTVFSGTSCRRPSPGRRDVRRERWR 105 Query: 375 TT 380 TT Sbjct: 106 TT 107
>CLAP2_HUMAN (O75122) CLIP-associating protein 2 (Cytoplasmic linker-associated| protein 2) Length = 1294 Score = 27.3 bits (59), Expect = 8.8 Identities = 14/38 (36%), Positives = 17/38 (44%) Frame = +3 Query: 270 PSLSRGCSRHHPNREETCTSAHTRLGPRCRRHRWLTTG 383 PS+S+GCSR TS P RH +TG Sbjct: 522 PSVSQGCSREASRESSRDTSPVRSFQPLASRHHSRSTG 559
>FPPS2_PARAR (O24242) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)| (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 27.3 bits (59), Expect = 8.8 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Frame = -3 Query: 328 EVHVSSRLG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 173 E+ +S LG C+E + V D I RRG CW+ +G+ G +L + Sbjct: 71 EIFHASALGWCVEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAANDGIILRN 127 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,498,906 Number of Sequences: 219361 Number of extensions: 1460465 Number of successful extensions: 3883 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 3701 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3882 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
