ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl31d01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466019.1| Oryza sativa (japonica cultivar-group), mRNA 180 3e-42
2gb|AY320036.1| Oryza sativa (japonica cultivar-group) RNA bindin... 180 3e-42
3dbj|AK065061.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 3e-42
4dbj|AK063159.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 3e-42
5gb|BT016256.1| Zea mays clone Contig89 mRNA sequence 174 2e-40
6gb|AY320037.1| Oryza sativa (japonica cultivar-group) RNA bindin... 155 2e-34
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
8dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
9dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
10gb|AY112472.1| Zea mays CL152_1 mRNA sequence 103 5e-19
11gb|BT009474.1| Triticum aestivum clone wr1.pk0030.f12:fis, full ... 54 4e-04
12gb|AC092827.8| Homo sapiens 12p BAC RP11-186N14 (Roswell Park Ca... 44 0.42
13emb|AL772362.8| Zebrafish DNA sequence from clone CH211-173K16 i... 44 0.42
14gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, com... 42 1.7
15gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, com... 42 1.7
16emb|BX629357.1|CNS09SBV Tetraodon nigroviridis BAC sequence 42 1.7
17gb|AC151998.6| Mus musculus BAC clone RP23-98L16 from chromosome... 42 1.7
18ref|NM_102108.2| Arabidopsis thaliana unknown protein AT1G22610 ... 40 6.6
19gb|AC157087.2| Mus musculus BAC clone RP23-287O24 from chromosom... 40 6.6
20gb|BC061968.1| Rattus norvegicus ATPase, Na+/K+ transporting, al... 40 6.6
21gb|AC157797.5| Mus musculus chromosome 1, clone RP24-149G24, com... 40 6.6
22gb|AC149483.1| Populus trichocarpa clone Pop1-69I13, complete se... 40 6.6
23ref|NM_007454.2| Mus musculus adaptor protein complex AP-1, beta... 40 6.6
24gb|AC089991.2| Bos taurus clone RP42-194K3, complete sequence 40 6.6
25gb|BC066827.1| Mus musculus adaptor protein complex AP-1, beta 1... 40 6.6
26gb|DP000008.1| Bos taurus target 1 genomic scaffold 40 6.6
27gb|AC005528.43| Mus musculus strain 129S6/SvEvTac clone rp21-493... 40 6.6
28gb|AC122230.4| Mus musculus BAC clone RP23-133F23 from 9, comple... 40 6.6
29gb|AC117215.3| Mus musculus BAC clone RP23-308M1 from 7, complet... 40 6.6
30gb|BC008513.1| Mus musculus adaptor protein complex AP-1, beta 1... 40 6.6
31emb|AL354711.24| Human DNA sequence from clone RP11-340N12 on ch... 40 6.6
32emb|AL139192.8| Human DNA sequence from clone RP11-515I23 on chr... 40 6.6
33emb|AL033519.42|HS340B19 Human DNA sequence from clone RP3-340B1... 40 6.6
34gb|AY080693.1| Arabidopsis thaliana At1g22610 mRNA sequence 40 6.6
35emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in... 40 6.6
36emb|AL645522.12| Mouse DNA sequence from clone RP23-64E17 on chr... 40 6.6
37emb|CR938710.1| Medicago truncatula chromosome 5 clone mth2-170k... 40 6.6
38emb|X53234.1|RNNKAA1B Rat NKAA1 gene for Na+/K+ -ATPase alpha1 s... 40 6.6
39gb|AC104455.2| Homo sapiens chromosome 1 clone RP4-682E18, compl... 40 6.6
40ref|NM_012504.1| Rattus norvegicus ATPase, Na+/K+ transporting, ... 40 6.6
41dbj|AK159273.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 40 6.6
42dbj|AK155892.1| Mus musculus B6-derived CD11 +ve dendritic cells... 40 6.6
43dbj|AK165747.1| Mus musculus 13 days embryo spinal cord cDNA, RI... 40 6.6
44dbj|AK160042.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 40 6.6
45gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome ... 40 6.6
46dbj|AK170376.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 6.6
47gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BAC F12... 40 6.6
48dbj|AK034140.1| Mus musculus adult male diencephalon cDNA, RIKEN... 40 6.6
49gb|AF115319.1|AF115319 Mus musculus Ucp2 gene, promoter sequence 40 6.6
50emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in... 40 6.6
51emb|BX815537.1|CNS0AEKP Arabidopsis thaliana Full-length cDNA Co... 40 6.6
52gb|AC064837.6| Homo sapiens BAC clone RP11-693G13 from 2, comple... 40 6.6
53gb|AC017081.8| Homo sapiens BAC clone RP11-470J24 from 2, comple... 40 6.6
54gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cance... 40 6.6
55dbj|AK193924.1| Mus musculus cDNA, clone:Y1G0113M08, strand:minu... 40 6.6
56dbj|AK177753.1| Mus musculus cDNA, clone:Y0G0104B02, strand:plus... 40 6.6
57gb|AC102777.12| Mus musculus chromosome 1, clone RP23-5K7, compl... 40 6.6
58emb|BX908726.21| Zebrafish DNA sequence from clone DKEY-74I2 in ... 40 6.6
59emb|CT573422.5| Mouse DNA sequence from clone RP24-76M8 on chrom... 40 6.6
60emb|X05882.1|RNATPAR Rat mRNA for sodium/potassium-transporting ... 40 6.6
61dbj|AP002428.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.6
62dbj|AP000923.5| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.6
63gb|AC139317.4| Mus musculus BAC clone RP24-495N6 from 15, comple... 40 6.6
64gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complet... 40 6.6
65gb|AC139378.4| Mus musculus BAC clone RP23-265F20 from 9, comple... 40 6.6
66gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, co... 40 6.6
67emb|Y07919.1|MMBPRADPR M.musculus mRNA for beta-prime-adaptin pr... 40 6.6
68gb|AC170255.8| Mus musculus chromosome 1, clone RP23-359K18, com... 40 6.6
69gb|M28647.1|RATNALPH1 Rattus norvegicus Na,K-ATPase alpha-1 subu... 40 6.6
70gb|M14511.1|RATATPA1 Rat Na+,K+-ATPase alpha isoform catalytic s... 40 6.6 
>ref|XM_466019.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3549

 Score =  180 bits (91), Expect = 3e-42
 Identities = 167/191 (87%), Gaps = 1/191 (0%)
 Strand = Plus / Minus

                                                                        
Query: 298  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 357
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 3153 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 3094

                                                                        
Query: 358  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 417
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 3093 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 3034

                                                                        
Query: 418  tgtcccatctcttgcccctttcaagtcgggcaagcccttcctc-agcatggcagcattga 476
            | |||||||||||||  |||||||| || |||||||||||||| ||||||| ||||||||
Sbjct: 3033 tatcccatctcttgcttctttcaagccgagcaagcccttcctcaagcatggtagcattga 2974

                       
Query: 477  tgctggattct 487
            |||||| ||||
Sbjct: 2973 tgctggtttct 2963



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 101  ttattgagcttaggggaaaaacaatgtat 129
            ||||| || ||||||||||||||||||||
Sbjct: 3443 ttattaagtttaggggaaaaacaatgtat 3415
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>gb|AY320036.1| Oryza sativa (japonica cultivar-group) RNA binding protein Rp120
            mRNA, complete cds
          Length = 2961

 Score =  180 bits (91), Expect = 3e-42
 Identities = 167/191 (87%), Gaps = 1/191 (0%)
 Strand = Plus / Minus

                                                                        
Query: 298  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 357
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 2932 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 2873

                                                                        
Query: 358  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 417
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 2872 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 2813

                                                                        
Query: 418  tgtcccatctcttgcccctttcaagtcgggcaagcccttcctc-agcatggcagcattga 476
            | |||||||||||||  |||||||| || |||||||||||||| ||||||| ||||||||
Sbjct: 2812 tatcccatctcttgcttctttcaagccgagcaagcccttcctcaagcatggtagcattga 2753

                       
Query: 477  tgctggattct 487
            |||||| ||||
Sbjct: 2752 tgctggtttct 2742
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>dbj|AK065061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J15, full
            insert sequence
          Length = 3547

 Score =  180 bits (91), Expect = 3e-42
 Identities = 167/191 (87%), Gaps = 1/191 (0%)
 Strand = Plus / Minus

                                                                        
Query: 298  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 357
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 3151 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 3092

                                                                        
Query: 358  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 417
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 3091 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 3032

                                                                        
Query: 418  tgtcccatctcttgcccctttcaagtcgggcaagcccttcctc-agcatggcagcattga 476
            | |||||||||||||  |||||||| || |||||||||||||| ||||||| ||||||||
Sbjct: 3031 tatcccatctcttgcttctttcaagccgagcaagcccttcctcaagcatggtagcattga 2972

                       
Query: 477  tgctggattct 487
            |||||| ||||
Sbjct: 2971 tgctggtttct 2961



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 101  ttattgagcttaggggaaaaacaatgtat 129
            ||||| || ||||||||||||||||||||
Sbjct: 3441 ttattaagtttaggggaaaaacaatgtat 3413
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>dbj|AK063159.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D08, full
            insert sequence
          Length = 1551

 Score =  180 bits (91), Expect = 3e-42
 Identities = 167/191 (87%), Gaps = 1/191 (0%)
 Strand = Plus / Minus

                                                                        
Query: 298  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 357
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 1169 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 1110

                                                                        
Query: 358  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 417
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 1109 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 1050

                                                                        
Query: 418  tgtcccatctcttgcccctttcaagtcgggcaagcccttcctc-agcatggcagcattga 476
            | |||||||||||||  |||||||| || |||||||||||||| ||||||| ||||||||
Sbjct: 1049 tatcccatctcttgcttctttcaagccgagcaagcccttcctcaagcatggtagcattga 990

                       
Query: 477  tgctggattct 487
            |||||| ||||
Sbjct: 989  tgctggtttct 979



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 101  ttattgagcttaggggaaaaacaatgtat 129
            ||||| || ||||||||||||||||||||
Sbjct: 1459 ttattaagtttaggggaaaaacaatgtat 1431
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>gb|BT016256.1| Zea mays clone Contig89 mRNA sequence
          Length = 1657

 Score =  174 bits (88), Expect = 2e-40
 Identities = 139/156 (89%)
 Strand = Plus / Minus

                                                                        
Query: 306  tgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagcctttccttcttc 365
            ||||| |||||||| |||||||| ||||| |||||||| |  ||||||||||||||||| 
Sbjct: 1350 tgctcgtcctcgtccgattcaacatctccgtactgccaaatccgcagcctttccttcttt 1291

                                                                        
Query: 366  gccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttgtgtcccat 425
            ||||| |||||||||||||||||||||| |||||| |||||||||||| | |||||||||
Sbjct: 1290 gccttgtcctggaactgttccaggttctggagagccgtcttcctctccctagtgtcccat 1231

                                                
Query: 426  ctcttgcccctttcaagtcgggcaagcccttcctca 461
            |||||||  ||||| || ||||||||||||||||||
Sbjct: 1230 ctcttgcttctttcgagccgggcaagcccttcctca 1195
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>gb|AY320037.1| Oryza sativa (japonica cultivar-group) RNA binding protein Rp120
            gene, complete cds
          Length = 5478

 Score =  155 bits (78), Expect = 2e-34
 Identities = 141/162 (87%)
 Strand = Plus / Minus

                                                                        
Query: 298  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 357
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 5271 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 5212

                                                                        
Query: 358  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 417
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 5211 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 5152

                                                      
Query: 418  tgtcccatctcttgcccctttcaagtcgggcaagcccttcct 459
            | |||||||||||||  |||||||| || |||||||||||||
Sbjct: 5151 tatcccatctcttgcttctttcaagccgagcaagcccttcct 5110
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  155 bits (78), Expect = 2e-34
 Identities = 141/162 (87%)
 Strand = Plus / Plus

                                                                            
Query: 298      ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 357
                |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 19118661 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 19118720

                                                                            
Query: 358      ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 417
                ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 19118721 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 19118780

                                                          
Query: 418      tgtcccatctcttgcccctttcaagtcgggcaagcccttcct 459
                | |||||||||||||  |||||||| || |||||||||||||
Sbjct: 19118781 tatcccatctcttgcttctttcaagccgagcaagcccttcct 19118822



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 101      ttattgagcttaggggaaaaacaatgtat 129
                ||||| || ||||||||||||||||||||
Sbjct: 19118371 ttattaagtttaggggaaaaacaatgtat 19118399
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>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0415B12
          Length = 157419

 Score =  155 bits (78), Expect = 2e-34
 Identities = 141/162 (87%)
 Strand = Plus / Plus

                                                                         
Query: 298   ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 357
             |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 16910 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 16969

                                                                         
Query: 358   ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 417
             ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 16970 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 17029

                                                       
Query: 418   tgtcccatctcttgcccctttcaagtcgggcaagcccttcct 459
             | |||||||||||||  |||||||| || |||||||||||||
Sbjct: 17030 tatcccatctcttgcttctttcaagccgagcaagcccttcct 17071



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 101   ttattgagcttaggggaaaaacaatgtat 129
             ||||| || ||||||||||||||||||||
Sbjct: 16620 ttattaagtttaggggaaaaacaatgtat 16648
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>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0047A17
          Length = 149142

 Score =  155 bits (78), Expect = 2e-34
 Identities = 141/162 (87%)
 Strand = Plus / Plus

                                                                          
Query: 298    ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 357
              |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 124182 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 124241

                                                                          
Query: 358    ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 417
              ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 124242 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 124301

                                                        
Query: 418    tgtcccatctcttgcccctttcaagtcgggcaagcccttcct 459
              | |||||||||||||  |||||||| || |||||||||||||
Sbjct: 124302 tatcccatctcttgcttctttcaagccgagcaagcccttcct 124343



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 101    ttattgagcttaggggaaaaacaatgtat 129
              ||||| || ||||||||||||||||||||
Sbjct: 123892 ttattaagtttaggggaaaaacaatgtat 123920
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>gb|AY112472.1| Zea mays CL152_1 mRNA sequence
          Length = 1436

 Score =  103 bits (52), Expect = 5e-19
 Identities = 76/84 (90%)
 Strand = Plus / Minus

                                                                       
Query: 378 aactgttccaggttctcgagagctgtcttcctctcctttgtgtcccatctcttgcccctt 437
           |||||||||||||||| |||||| |||||||||||| | ||||||||||||||||  |||
Sbjct: 976 aactgttccaggttctggagagccgtcttcctctccctagtgtcccatctcttgcttctt 917

                                   
Query: 438 tcaagtcgggcaagcccttcctca 461
           || || ||||||||||||||||||
Sbjct: 916 tcgagccgggcaagcccttcctca 893
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>gb|BT009474.1| Triticum aestivum clone wr1.pk0030.f12:fis, full insert mRNA sequence
          Length = 1394

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 461  agcatggcagcattgatgctggattct 487
            |||||||||||||||||||||||||||
Sbjct: 1389 agcatggcagcattgatgctggattct 1363
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>gb|AC092827.8| Homo sapiens 12p BAC RP11-186N14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 117636

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 118   aaaacaatgtatatagttctct 139
             ||||||||||||||||||||||
Sbjct: 97578 aaaacaatgtatatagttctct 97599
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>emb|AL772362.8| Zebrafish DNA sequence from clone CH211-173K16 in linkage group 13,
              complete sequence
          Length = 165993

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 182    ttcatataagctctcgactgagtttc 207
              |||||||| |||||||||||||||||
Sbjct: 151331 ttcatatatgctctcgactgagtttc 151306
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>gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, complete sequence
          Length = 275646

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 101    ttattgagcttaggggaaaaa 121
              |||||||||||||||||||||
Sbjct: 246866 ttattgagcttaggggaaaaa 246886
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>gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, complete sequence
          Length = 257203

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 101   ttattgagcttaggggaaaaa 121
             |||||||||||||||||||||
Sbjct: 88447 ttattgagcttaggggaaaaa 88467
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>emb|BX629357.1|CNS09SBV Tetraodon nigroviridis BAC sequence
          Length = 168910

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 169    ttcttactaagttttcatata 189
              |||||||||||||||||||||
Sbjct: 141218 ttcttactaagttttcatata 141198
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>gb|AC151998.6| Mus musculus BAC clone RP23-98L16 from chromosome 8, complete sequence
          Length = 219376

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 74     aaacgcagtccacagaggaca 94
              |||||||||||||||||||||
Sbjct: 116043 aaacgcagtccacagaggaca 116063
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>ref|NM_102108.2| Arabidopsis thaliana unknown protein AT1G22610 mRNA, complete cds
          Length = 3295

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 309 tcttcctcgtcggattcaacgtctccat 336
           ||||| ||||||| ||||||||||||||
Sbjct: 755 tcttcttcgtcggcttcaacgtctccat 728
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>gb|AC157087.2| Mus musculus BAC clone RP23-287O24 from chromosome 9, complete sequence
          Length = 226149

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 422    ccatctcttgcccctttcaa 441
              ||||||||||||||||||||
Sbjct: 223814 ccatctcttgcccctttcaa 223833
to top
>gb|BC061968.1| Rattus norvegicus ATPase, Na+/K+ transporting, alpha 1 polypeptide,
           mRNA (cDNA clone MGC:72546 IMAGE:5598014), complete cds
          Length = 3700

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 353 cctttccttcttcgccttct 372
           ||||||||||||||||||||
Sbjct: 338 cctttccttcttcgccttct 319
to top
>gb|AC157797.5| Mus musculus chromosome 1, clone RP24-149G24, complete sequence
          Length = 157629

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 468   cagcattgatgctggattct 487
             ||||||||||||||||||||
Sbjct: 92820 cagcattgatgctggattct 92801
to top
>gb|AC149483.1| Populus trichocarpa clone Pop1-69I13, complete sequence
          Length = 51685

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 116   gaaaaacaatgtatatagttctct 139
             |||||||||| |||||||||||||
Sbjct: 28326 gaaaaacaatatatatagttctct 28303
to top
>ref|NM_007454.2| Mus musculus adaptor protein complex AP-1, beta 1 subunit (Ap1b1),
            mRNA
          Length = 3942

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 86   cagaggacacagaccttattgagc 109
            ||||||| ||||||||||||||||
Sbjct: 1819 cagaggagacagaccttattgagc 1842
to top
>gb|AC089991.2| Bos taurus clone RP42-194K3, complete sequence
          Length = 159196

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 66    caaagaagaaacgcagtccacaga 89
             |||||||||||| |||||||||||
Sbjct: 79348 caaagaagaaacacagtccacaga 79325
to top
>gb|BC066827.1| Mus musculus adaptor protein complex AP-1, beta 1 subunit, mRNA
           (cDNA clone IMAGE:30465759), partial cds
          Length = 2433

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 86  cagaggacacagaccttattgagc 109
           ||||||| ||||||||||||||||
Sbjct: 444 cagaggagacagaccttattgagc 467
to top
>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 66     caaagaagaaacgcagtccacaga 89
              |||||||||||| |||||||||||
Sbjct: 835909 caaagaagaaacacagtccacaga 835886
to top
>gb|AC005528.43| Mus musculus strain 129S6/SvEvTac clone rp21-493n6 map 11a2, complete
              sequence
          Length = 199326

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 86     cagaggacacagaccttattgagc 109
              ||||||| ||||||||||||||||
Sbjct: 160488 cagaggagacagaccttattgagc 160465
to top
>gb|AC122230.4| Mus musculus BAC clone RP23-133F23 from 9, complete sequence
          Length = 183554

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 452   cccttcctcagcatggcagc 471
             ||||||||||||||||||||
Sbjct: 87158 cccttcctcagcatggcagc 87139
to top
>gb|AC117215.3| Mus musculus BAC clone RP23-308M1 from 7, complete sequence
          Length = 192092

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 128   atatagttctcttcttctaatggc 151
             |||| |||||||||||||||||||
Sbjct: 99542 atatggttctcttcttctaatggc 99565
to top
>gb|BC008513.1| Mus musculus adaptor protein complex AP-1, beta 1 subunit, mRNA (cDNA
            clone MGC:5850 IMAGE:3601435), complete cds
          Length = 3724

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 86   cagaggacacagaccttattgagc 109
            ||||||| ||||||||||||||||
Sbjct: 1713 cagaggagacagaccttattgagc 1736
to top
>emb|AL354711.24| Human DNA sequence from clone RP11-340N12 on chromosome 9 Contains the 3'
              end of a novel gene (FLJ25636) and the 5' end of a novel
              gene (FLJ20276), complete sequence
          Length = 162126

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 5      ttccaatcctgaatttaatttcca 28
              |||||||||||||||| |||||||
Sbjct: 145724 ttccaatcctgaatttcatttcca 145701
to top
>emb|AL139192.8| Human DNA sequence from clone RP11-515I23 on chromosome Xq13.2-21.2
             Contains the 5' end of a novel gene, complete sequence
          Length = 94056

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 408   ctctcctttgtgtcccatct 427
             ||||||||||||||||||||
Sbjct: 81672 ctctcctttgtgtcccatct 81691
to top
>emb|AL033519.42|HS340B19 Human DNA sequence from clone RP3-340B19 on chromosome 6p21.2-21.3
             Contains the TULP1 gene for tubby like protein 1, a novel
             gene, ribosomal protein S15A (RPS15A) and L36 (RPL36)
             pseudogenes, the 3' end of the FKBP5 gene for FK506
             binding protein 5 (FKBP51) and two CpG islands, complete
             sequence
          Length = 178985

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 445   gggcaagcccttcctcagca 464
             ||||||||||||||||||||
Sbjct: 73210 gggcaagcccttcctcagca 73191
to top
>gb|AY080693.1| Arabidopsis thaliana At1g22610 mRNA sequence
          Length = 1920

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 309 tcttcctcgtcggattcaacgtctccat 336
           ||||| ||||||| ||||||||||||||
Sbjct: 746 tcttcttcgtcggcttcaacgtctccat 719
to top
>emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in linkage group 5, complete
              sequence
          Length = 185915

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    ataaatatagtctctctttc 171
              ||||||||||||||||||||
Sbjct: 181778 ataaatatagtctctctttc 181797
to top
>emb|AL645522.12| Mouse DNA sequence from clone RP23-64E17 on chromosome 11 Cntains the 3'
              end of the Nipsnap1 gene for 4-nitrophenylphosphatase
              domain and non-neuronal SNAP25-like protein homolog 1 (C.
              elegans), a novel gene, a ribosomal protein L17 (Rpl17)
              pseudogene, the Nefh gene for neurofilament heavy
              polypeptide, the Ap1b1 gene for adaptor protein complex
              AP-1 beta 1 subunit, the gene for the ortholog of human
              RAS-related protein on chromosome 22, the gene for the
              ortholog of human growth arrest-specific 2 like 1 GAS2L1
              and six CpG islands, complete sequence
          Length = 183758

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 86     cagaggacacagaccttattgagc 109
              ||||||| ||||||||||||||||
Sbjct: 146003 cagaggagacagaccttattgagc 146026
to top
>emb|CR938710.1| Medicago truncatula chromosome 5 clone mth2-170k9, COMPLETE SEQUENCE
          Length = 123977

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 362   cttcgccttctcctggaactgttccaggttct 393
             |||| |||||||||||||||  ||||||||||
Sbjct: 51074 cttcaccttctcctggaactcctccaggttct 51105
to top
>emb|X53234.1|RNNKAA1B Rat NKAA1 gene for Na+/K+ -ATPase alpha1 subunit exon 2
          Length = 1813

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  cctttccttcttcgccttct 372
            ||||||||||||||||||||
Sbjct: 1771 cctttccttcttcgccttct 1752
to top
>gb|AC104455.2| Homo sapiens chromosome 1 clone RP4-682E18, complete sequence
          Length = 125123

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   tgtatatagttctcttcttc 144
             ||||||||||||||||||||
Sbjct: 87138 tgtatatagttctcttcttc 87157
to top
>ref|NM_012504.1| Rattus norvegicus ATPase, Na+/K+ transporting, alpha 1 polypeptide
           (Atp1a1), mRNA
          Length = 3636

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 353 cctttccttcttcgccttct 372
           ||||||||||||||||||||
Sbjct: 327 cctttccttcttcgccttct 308
to top
>dbj|AK159273.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
            library, clone:I420013K18 product:adaptor protein complex
            AP-1, beta 1 subunit, full insert sequence
          Length = 3762

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 86   cagaggacacagaccttattgagc 109
            ||||||| ||||||||||||||||
Sbjct: 1791 cagaggagacagaccttattgagc 1814
to top
>dbj|AK155892.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F730314K12
            product:adaptor protein complex AP-1, beta 1 subunit,
            full insert sequence
          Length = 3792

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 86   cagaggacacagaccttattgagc 109
            ||||||| ||||||||||||||||
Sbjct: 1820 cagaggagacagaccttattgagc 1843
to top
>dbj|AK165747.1| Mus musculus 13 days embryo spinal cord cDNA, RIKEN full-length
            enriched library, clone:G630049C13 product:adaptor
            protein complex AP-1, beta 1 subunit, full insert
            sequence
          Length = 3799

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 86   cagaggacacagaccttattgagc 109
            ||||||| ||||||||||||||||
Sbjct: 1817 cagaggagacagaccttattgagc 1840
to top
>dbj|AK160042.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
            library, clone:I420045E07 product:adaptor protein complex
            AP-1, beta 1 subunit, full insert sequence
          Length = 3762

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 86   cagaggacacagaccttattgagc 109
            ||||||| ||||||||||||||||
Sbjct: 1791 cagaggagacagaccttattgagc 1814
to top
>gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome 6 clone RP31-263K14,
             complete sequence
          Length = 151836

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   aaaacaatgtatatagttct 137
             ||||||||||||||||||||
Sbjct: 34730 aaaacaatgtatatagttct 34711
to top
>dbj|AK170376.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630101J08
            product:adaptor protein complex AP-1, beta 1 subunit,
            full insert sequence
          Length = 3930

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 86   cagaggacacagaccttattgagc 109
            ||||||| ||||||||||||||||
Sbjct: 1811 cagaggagacagaccttattgagc 1834
to top
>gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BAC F12K8 genomic sequence, complete
             sequence
          Length = 107200

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 309   tcttcctcgtcggattcaacgtctccat 336
             ||||| ||||||| ||||||||||||||
Sbjct: 12990 tcttcttcgtcggcttcaacgtctccat 13017
to top
>dbj|AK034140.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched
            library, clone:9330159F11 product:adaptor protein complex
            AP-1, beta 1 subunit, full insert sequence
          Length = 4253

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 86   cagaggacacagaccttattgagc 109
            ||||||| ||||||||||||||||
Sbjct: 2100 cagaggagacagaccttattgagc 2123
to top
>gb|AF115319.1|AF115319 Mus musculus Ucp2 gene, promoter sequence
          Length = 7342

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 128  atatagttctcttcttctaatggc 151
            |||| |||||||||||||||||||
Sbjct: 3933 atatggttctcttcttctaatggc 3910
to top
>emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in linkage group 5,
             complete sequence
          Length = 160041

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   ataaatatagtctctctttc 171
             ||||||||||||||||||||
Sbjct: 88307 ataaatatagtctctctttc 88326
to top
>emb|BX815537.1|CNS0AEKP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS70ZB10 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2808

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 309 tcttcctcgtcggattcaacgtctccat 336
           ||||| ||||||| ||||||||||||||
Sbjct: 687 tcttcttcgtcggcttcaacgtctccat 660
to top
>gb|AC064837.6| Homo sapiens BAC clone RP11-693G13 from 2, complete sequence
          Length = 111857

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   tcttctaatggcataaatat 159
             ||||||||||||||||||||
Sbjct: 84384 tcttctaatggcataaatat 84403
to top
>gb|AC017081.8| Homo sapiens BAC clone RP11-470J24 from 2, complete sequence
          Length = 149462

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 217   ccaaaactttcatatctaaa 236
             ||||||||||||||||||||
Sbjct: 29599 ccaaaactttcatatctaaa 29580
to top
>gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 185470

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   gtgtccaaaactttcatatc 232
             ||||||||||||||||||||
Sbjct: 41312 gtgtccaaaactttcatatc 41293
to top
>dbj|AK193924.1| Mus musculus cDNA, clone:Y1G0113M08, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000063477, based on BLAT search
          Length = 408

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 86  cagaggacacagaccttattgagc 109
           ||||||| ||||||||||||||||
Sbjct: 297 cagaggagacagaccttattgagc 320
to top
>dbj|AK177753.1| Mus musculus cDNA, clone:Y0G0104B02, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000063477, based on BLAT search
          Length = 388

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 86  cagaggacacagaccttattgagc 109
           ||||||| ||||||||||||||||
Sbjct: 277 cagaggagacagaccttattgagc 300
to top
>gb|AC102777.12| Mus musculus chromosome 1, clone RP23-5K7, complete sequence
          Length = 195874

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 468    cagcattgatgctggattct 487
              ||||||||||||||||||||
Sbjct: 137517 cagcattgatgctggattct 137536
to top
>emb|BX908726.21| Zebrafish DNA sequence from clone DKEY-74I2 in linkage group 22,
             complete sequence
          Length = 180599

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 397   gagctgtcttcctctccttt 416
             ||||||||||||||||||||
Sbjct: 92306 gagctgtcttcctctccttt 92287
to top
>emb|CT573422.5| Mouse DNA sequence from clone RP24-76M8 on chromosome 9, complete
              sequence
          Length = 193236

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 422    ccatctcttgcccctttcaa 441
              ||||||||||||||||||||
Sbjct: 168125 ccatctcttgcccctttcaa 168144
to top
>emb|X05882.1|RNATPAR Rat mRNA for sodium/potassium-transporting ATPase alpha-1 chain
           precursor (atp1a1 gene)
          Length = 3407

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 353 cctttccttcttcgccttct 372
           ||||||||||||||||||||
Sbjct: 104 cctttccttcttcgccttct 85
to top
>dbj|AP002428.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-99C10, complete
              sequences
          Length = 175110

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 220    aaactttcatatctaaacca 239
              ||||||||||||||||||||
Sbjct: 139050 aaactttcatatctaaacca 139031
to top
>dbj|AP000923.5| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-752D5, complete
             sequences
          Length = 170973

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   aaactttcatatctaaacca 239
             ||||||||||||||||||||
Sbjct: 31136 aaactttcatatctaaacca 31117
to top
>gb|AC139317.4| Mus musculus BAC clone RP24-495N6 from 15, complete sequence
          Length = 182415

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 355   tttccttcttcgccttctcc 374
             ||||||||||||||||||||
Sbjct: 98222 tttccttcttcgccttctcc 98203
to top
>gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complete sequence
          Length = 232568

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 128   atatagttctcttcttctaatggc 151
             |||| |||||||||||||||||||
Sbjct: 42584 atatggttctcttcttctaatggc 42607
to top
>gb|AC139378.4| Mus musculus BAC clone RP23-265F20 from 9, complete sequence
          Length = 256632

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 452    cccttcctcagcatggcagc 471
              ||||||||||||||||||||
Sbjct: 203537 cccttcctcagcatggcagc 203556
to top
>gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, complete sequence
          Length = 194167

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 128   atatagttctcttcttctaatggc 151
             |||| |||||||||||||||||||
Sbjct: 78320 atatggttctcttcttctaatggc 78343
to top
>emb|Y07919.1|MMBPRADPR M.musculus mRNA for beta-prime-adaptin protein
          Length = 3885

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 86   cagaggacacagaccttattgagc 109
            ||||||| ||||||||||||||||
Sbjct: 1755 cagaggagacagaccttattgagc 1778
to top
>gb|AC170255.8| Mus musculus chromosome 1, clone RP23-359K18, complete sequence
          Length = 226189

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 468    cagcattgatgctggattct 487
              ||||||||||||||||||||
Sbjct: 148645 cagcattgatgctggattct 148626
to top
>gb|M28647.1|RATNALPH1 Rattus norvegicus Na,K-ATPase alpha-1 subunit mRNA, complete cds
          Length = 3599

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 353 cctttccttcttcgccttct 372
           ||||||||||||||||||||
Sbjct: 350 cctttccttcttcgccttct 331
to top
>gb|M14511.1|RATATPA1 Rat Na+,K+-ATPase alpha isoform catalytic subunit mRNA, complete
           cds
          Length = 3636

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 353 cctttccttcttcgccttct 372
           ||||||||||||||||||||
Sbjct: 327 cctttccttcttcgccttct 308


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,396,371
Number of Sequences: 3902068
Number of extensions: 5396371
Number of successful extensions: 101579
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101360
Number of HSP's gapped (non-prelim): 215
length of query: 487
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 465
effective length of database: 17,147,199,772
effective search space: 7973447893980
effective search space used: 7973447893980
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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