ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl31c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC158611.7| Mus musculus 10 BAC RP23-29D19 (Roswell Park Canc... 46 0.018
2gb|AC164630.6| Mus musculus 10 BAC RP23-153M4 (Roswell Park Canc... 46 0.018
3gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 42 0.28
4gb|AC137612.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.28
5gb|AC137615.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 0.28
6emb|AL356834.1|NCB11B22 Neurospora crassa DNA linkage group II B... 42 0.28
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.28
8emb|AL627235.12| Mouse DNA sequence from clone RP23-324C12 on ch... 42 0.28
9gb|AC161442.5| Mus musculus chromosome 5, clone RP23-384P12, com... 40 1.1
10emb|AL163283.2|HS21C083 Homo sapiens chromosome 21 segment HS21C083 40 1.1
11gb|AC121350.2| Rattus norvegicus chromosome 1 clone RP32-101I22 ... 40 1.1
12emb|AL954236.1| Pan troglodytes chromosome 22 clone RP43-054L10 ... 40 1.1
13gb|AC105924.4| Homo sapiens BAC clone RP11-706F1 from 4, complet... 40 1.1
14gb|AF064866.2|AF064866 Homo sapiens chromosome 21 clone PAC 198E... 40 1.1
15gb|AF043945.2|AF043945 Homo sapiens chromosome 21 clone PAC 39C1... 40 1.1
16emb|BX072531.6| Zebrafish DNA sequence from clone CH211-188A22, ... 40 1.1
17gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section ... 38 4.4
18gb|AC004041.1| Homo sapiens chromosome 5, P1 clone 282d12, P1 51... 38 4.4
19gb|AC161484.4| Mus musculus chromosome 5, clone RP23-6C10, compl... 38 4.4
20gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, comp... 38 4.4
21gb|AC119215.6| Mus musculus chromosome 5, clone RP24-199K22, com... 38 4.4
22gb|AC124764.3| Mus musculus BAC clone RP23-166K1 from chromosome... 38 4.4
23emb|CR450770.21| Zebrafish DNA sequence from clone DKEY-161M5 in... 38 4.4
24emb|BX936415.10| Zebrafish DNA sequence from clone CH211-242N18 ... 38 4.4
25gb|AC103630.10| Mus musculus chromosome 6, clone RP24-358D8, com... 38 4.4
26emb|CR356245.25| Zebrafish DNA sequence from clone CH211-257I15 ... 38 4.4
27gb|AC125177.4| Mus musculus BAC clone RP23-315H8 from chromosome... 38 4.4
28gb|AC125182.3| Mus musculus BAC clone RP23-293D23 from 15, compl... 38 4.4
29ref|XM_737955.1| Plasmodium chabaudi chabaudi hypothetical prote... 38 4.4
30gb|AC118474.10| Mus musculus chromosome 8, clone RP23-288O12, co... 38 4.4
31gb|AC139853.17| Medicago truncatula clone mth2-13d20, complete s... 38 4.4
32gb|CP000243.1| Escherichia coli UTI89, complete genome 38 4.4
33emb|CR405713.7| Zebrafish DNA sequence from clone DKEY-12D5 in l... 38 4.4
34emb|AL590043.7| Human DNA sequence from clone RP11-224F14 on chr... 38 4.4
35emb|AL357149.13| Human DNA sequence from clone RP11-352E13 on ch... 38 4.4
36gb|AC161185.5| Mus musculus chromosome 5, clone RP23-297D16, com... 38 4.4
37emb|CR382399.1| Plasmodium falciparum chromosome 6, complete seq... 38 4.4
38gb|AC162297.5| Mus musculus chromosome 18, clone RP24-276H6, com... 38 4.4
39gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, com... 38 4.4
40emb|BX511251.16| Zebrafish DNA sequence from clone CH211-222O13 ... 38 4.4
41emb|BX324135.14| Zebrafish DNA sequence from clone DKEY-16J16, c... 38 4.4
42gb|AC026441.5| Homo sapiens chromosome 5 clone CTD-2280O3, compl... 38 4.4
43emb|BX005140.18| Zebrafish DNA sequence from clone CH211-11F22, ... 38 4.4
44gb|AC007923.7| Homo sapiens chromosome 17, clone RP11-805L22, co... 38 4.4
45gb|AC183492.1| Brassica oleracea Contig G, complete sequence 38 4.4
46gb|AC022367.34| Homo sapiens 12 BAC RP11-685B13 (Roswell Park Ca... 38 4.4
47gb|AC022887.10| Homo sapiens chromosome 8, clone RP11-480L14, co... 38 4.4
48emb|BX571694.10| Zebrafish DNA sequence from clone CH211-159E21 ... 38 4.4
49gb|AC157216.2| Pan troglodytes BAC clone CH251-66E23 from chromo... 38 4.4
50gb|AC019274.5|AC019274 Homo sapiens, clone RP11-11P7, complete s... 38 4.4
51dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.4
52gb|AC103778.2| Homo sapiens chromosome 8, clone RP11-463C14, com... 38 4.4
53gb|AC073533.19| Homo sapiens X BAC RP11-589J20 (Roswell Park Can... 38 4.4
54gb|AC078845.2|AC078845 Homo sapiens chromosome 7 clone RP11-707A... 38 4.4
55gb|AC115485.3| Homo sapiens chromosome 8, clone GS1-57L11, compl... 38 4.4
56gb|AC117471.6| Homo sapiens 3 BAC RP11-558J4 (Roswell Park Cance... 38 4.4
57gb|AC016648.5|AC016648 Homo sapiens chromosome 5 clone RPCI-1_13... 38 4.4
58emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D ... 38 4.4
59gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 38 4.4
60emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa... 38 4.4
61emb|BX664710.2|CNS09SC0 Oryza sativa chromosome 12, . PAC P0243A... 38 4.4
62gb|L78746.1|HUM16DC93Z Homo sapiens (subclone 4_c4 from P1 H16) ... 38 4.4
63gb|J00271.1|HUMMET2 Human metallothionein-II gene (mt-II) and fl... 38 4.4
64emb|AL645753.11| Mouse DNA sequence from clone CT7-315N12 on chr... 38 4.4
65emb|AL645759.11| Mouse DNA sequence from clone RP23-441I10 on ch... 38 4.4 
>gb|AC158611.7| Mus musculus 10 BAC RP23-29D19 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 214923

 Score = 46.1 bits (23), Expect = 0.018
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 66    aggatattacacataattatttt 88
             |||||||||||||||||||||||
Sbjct: 48033 aggatattacacataattatttt 48011
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>gb|AC164630.6| Mus musculus 10 BAC RP23-153M4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 187031

 Score = 46.1 bits (23), Expect = 0.018
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 66    aggatattacacataattatttt 88
             |||||||||||||||||||||||
Sbjct: 40493 aggatattacacataattatttt 40515
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 65     caggatattacacataattat 85
              |||||||||||||||||||||
Sbjct: 341317 caggatattacacataattat 341297
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>gb|AC137612.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022B03,
              complete sequence
          Length = 151814

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 74     acacataattattttatagaaaaag 98
              ||||||||||||||| |||||||||
Sbjct: 131786 acacataattattttttagaaaaag 131762
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>gb|AC137615.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0053F13, from chromosome 5, complete sequence
          Length = 149538

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 74    acacataattattttatagaaaaag 98
             ||||||||||||||| |||||||||
Sbjct: 46364 acacataattattttttagaaaaag 46340
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>emb|AL356834.1|NCB11B22 Neurospora crassa DNA linkage group II BAC clone B11B22
          Length = 73803

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 16    tattttacattatcaaacctt 36
             |||||||||||||||||||||
Sbjct: 59698 tattttacattatcaaacctt 59718
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 74       acacataattattttatagaaaaag 98
                ||||||||||||||| |||||||||
Sbjct: 10146270 acacataattattttttagaaaaag 10146246
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>emb|AL627235.12| Mouse DNA sequence from clone RP23-324C12 on chromosome 11, complete
             sequence
          Length = 118185

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 77    cataattattttatagaaaaa 97
             |||||||||||||||||||||
Sbjct: 30239 cataattattttatagaaaaa 30259
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>gb|AC161442.5| Mus musculus chromosome 5, clone RP23-384P12, complete sequence
          Length = 174557

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 70    tattacacataattattttatagaaaaa 97
             ||||||||||||||| ||||||||||||
Sbjct: 27337 tattacacataatta-tttatagaaaaa 27311
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>emb|AL163283.2|HS21C083 Homo sapiens chromosome 21 segment HS21C083
          Length = 340000

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 75     cacataattattttatagaaaaag 98
              ||||||||||||||||| ||||||
Sbjct: 305124 cacataattattttatataaaaag 305147
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>gb|AC121350.2| Rattus norvegicus chromosome 1 clone RP32-101I22 map q31-q35, complete
              sequence
          Length = 115948

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     acataattattttatagaaa 95
              ||||||||||||||||||||
Sbjct: 115325 acataattattttatagaaa 115306
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>emb|AL954236.1| Pan troglodytes chromosome 22 clone RP43-054L10 map 22q22.2-q22.3,
              complete sequence
          Length = 195913

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 75     cacataattattttatagaaaaag 98
              ||||||||||||||||| ||||||
Sbjct: 110528 cacataattattttatataaaaag 110551
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>gb|AC105924.4| Homo sapiens BAC clone RP11-706F1 from 4, complete sequence
          Length = 160050

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 65    caggatattacacataattatttt 88
             |||||| |||||||||||||||||
Sbjct: 59518 caggatcttacacataattatttt 59541
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>gb|AF064866.2|AF064866 Homo sapiens chromosome 21 clone PAC 198E8, map 21q22.3, complete
              sequence
          Length = 119847

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 75     cacataattattttatagaaaaag 98
              ||||||||||||||||| ||||||
Sbjct: 118434 cacataattattttatataaaaag 118457
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>gb|AF043945.2|AF043945 Homo sapiens chromosome 21 clone PAC 39C17 map 21q22.3, complete
             sequence
          Length = 109865

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 75    cacataattattttatagaaaaag 98
             ||||||||||||||||| ||||||
Sbjct: 27454 cacataattattttatataaaaag 27477
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>emb|BX072531.6| Zebrafish DNA sequence from clone CH211-188A22, complete sequence
          Length = 156372

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    attttacattatcaaacctt 36
             ||||||||||||||||||||
Sbjct: 89650 attttacattatcaaacctt 89669
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>gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section 6 of 9 of the complete
              sequence
          Length = 250421

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 75     cacataattattttatagaaaaa 97
              |||||||| ||||||||||||||
Sbjct: 175240 cacataataattttatagaaaaa 175262
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>gb|AC004041.1| Homo sapiens chromosome 5, P1 clone 282d12, P1 5109 (LBNL H16),
             complete sequence
          Length = 75902

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 70    tattacacataattatttt 88
             |||||||||||||||||||
Sbjct: 56123 tattacacataattatttt 56141
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>gb|AC161484.4| Mus musculus chromosome 5, clone RP23-6C10, complete sequence
          Length = 249620

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    tcaaaccttgggtgtttca 46
             |||||||||||||||||||
Sbjct: 89608 tcaaaccttgggtgtttca 89590
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>gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, complete sequence
          Length = 210751

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 17    attttacattatcaaacct 35
             |||||||||||||||||||
Sbjct: 30164 attttacattatcaaacct 30182
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>gb|AC119215.6| Mus musculus chromosome 5, clone RP24-199K22, complete sequence
          Length = 186611

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    tcaaaccttgggtgtttca 46
             |||||||||||||||||||
Sbjct: 31728 tcaaaccttgggtgtttca 31710
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>gb|AC124764.3| Mus musculus BAC clone RP23-166K1 from chromosome 18, complete sequence
          Length = 209579

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 26     tatcaaaccttgggtgttt 44
              |||||||||||||||||||
Sbjct: 190693 tatcaaaccttgggtgttt 190711
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>emb|CR450770.21| Zebrafish DNA sequence from clone DKEY-161M5 in linkage group 8,
             complete sequence
          Length = 153753

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 73    tacacataattattttata 91
             |||||||||||||||||||
Sbjct: 57765 tacacataattattttata 57783
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>emb|BX936415.10| Zebrafish DNA sequence from clone CH211-242N18 in linkage group 6,
             complete sequence
          Length = 176089

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 79    taattattttatagaaaaa 97
             |||||||||||||||||||
Sbjct: 17064 taattattttatagaaaaa 17082
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>gb|AC103630.10| Mus musculus chromosome 6, clone RP24-358D8, complete sequence
          Length = 184937

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 69    atattacacataattattttata 91
             |||||||||| ||||||||||||
Sbjct: 32941 atattacacaaaattattttata 32919
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>emb|CR356245.25| Zebrafish DNA sequence from clone CH211-257I15 in linkage group 8,
             complete sequence
          Length = 153042

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 70    tattacacataattatttt 88
             |||||||||||||||||||
Sbjct: 93452 tattacacataattatttt 93470
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>gb|AC125177.4| Mus musculus BAC clone RP23-315H8 from chromosome 8, complete sequence
          Length = 217567

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 78     ataattattttatagaaaa 96
              |||||||||||||||||||
Sbjct: 176243 ataattattttatagaaaa 176261
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>gb|AC125182.3| Mus musculus BAC clone RP23-293D23 from 15, complete sequence
          Length = 169841

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     aattattttatagaaaaag 98
              |||||||||||||||||||
Sbjct: 116999 aattattttatagaaaaag 116981
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>ref|XM_737955.1| Plasmodium chabaudi chabaudi hypothetical protein (PC402828.00.0)
           partial mRNA
          Length = 317

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 71  attacacataattatttta 89
           |||||||||||||||||||
Sbjct: 267 attacacataattatttta 285
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>gb|AC118474.10| Mus musculus chromosome 8, clone RP23-288O12, complete sequence
          Length = 191490

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 78     ataattattttatagaaaa 96
              |||||||||||||||||||
Sbjct: 137956 ataattattttatagaaaa 137938
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>gb|AC139853.17| Medicago truncatula clone mth2-13d20, complete sequence
          Length = 93375

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 8     tctcatactattttacatt 26
             |||||||||||||||||||
Sbjct: 35735 tctcatactattttacatt 35753
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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 79      taattattttatagaaaaa 97
               |||||||||||||||||||
Sbjct: 2841695 taattattttatagaaaaa 2841713
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>emb|CR405713.7| Zebrafish DNA sequence from clone DKEY-12D5 in linkage group 8,
             complete sequence
          Length = 99181

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 70    tattacacataattatttt 88
             |||||||||||||||||||
Sbjct: 66422 tattacacataattatttt 66440
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>emb|AL590043.7| Human DNA sequence from clone RP11-224F14 on chromosome X Contains a
             CpG island, complete sequence
          Length = 142769

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 73    tacacataattattttatagaaa 95
             |||| ||||||||||||||||||
Sbjct: 19655 tacaaataattattttatagaaa 19633
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>emb|AL357149.13| Human DNA sequence from clone RP11-352E13 on chromosome 6 Contains the 3'
              end of the UTRN gene for utrophin (homologous to
              dystrophin), complete sequence
          Length = 201399

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 79     taattattttatagaaaaa 97
              |||||||||||||||||||
Sbjct: 106843 taattattttatagaaaaa 106861
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>gb|AC161185.5| Mus musculus chromosome 5, clone RP23-297D16, complete sequence
          Length = 206099

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 17    attttacattatcaaacct 35
             |||||||||||||||||||
Sbjct: 29964 attttacattatcaaacct 29946
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>emb|CR382399.1| Plasmodium falciparum chromosome 6, complete sequence; segment 2/5
          Length = 348174

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 78     ataattattttatagaaaa 96
              |||||||||||||||||||
Sbjct: 112065 ataattattttatagaaaa 112047
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>gb|AC162297.5| Mus musculus chromosome 18, clone RP24-276H6, complete sequence
          Length = 190293

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 26    tatcaaaccttgggtgttt 44
             |||||||||||||||||||
Sbjct: 84313 tatcaaaccttgggtgttt 84331
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>gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, complete sequence
          Length = 189532

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 71   attacacataattattttataga 93
            |||||||||||| ||||||||||
Sbjct: 9225 attacacataataattttataga 9247
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>emb|BX511251.16| Zebrafish DNA sequence from clone CH211-222O13 in linkage group 2,
             complete sequence
          Length = 169250

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 71    attacacataattatttta 89
             |||||||||||||||||||
Sbjct: 98462 attacacataattatttta 98480
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>emb|BX324135.14| Zebrafish DNA sequence from clone DKEY-16J16, complete sequence
          Length = 229936

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 78   ataattattttatagaaaa 96
            |||||||||||||||||||
Sbjct: 6625 ataattattttatagaaaa 6643
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>gb|AC026441.5| Homo sapiens chromosome 5 clone CTD-2280O3, complete sequence
          Length = 112533

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 12    atactattttacattatca 30
             |||||||||||||||||||
Sbjct: 99627 atactattttacattatca 99645
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>emb|BX005140.18| Zebrafish DNA sequence from clone CH211-11F22, complete sequence
          Length = 177312

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 72   ttacacataattattttat 90
            |||||||||||||||||||
Sbjct: 4510 ttacacataattattttat 4492
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>gb|AC007923.7| Homo sapiens chromosome 17, clone RP11-805L22, complete sequence
          Length = 180270

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 72    ttacacataattattttat 90
             |||||||||||||||||||
Sbjct: 86521 ttacacataattattttat 86503
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>gb|AC183492.1| Brassica oleracea Contig G, complete sequence
          Length = 236640

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 78     ataattattttatagaaaa 96
              |||||||||||||||||||
Sbjct: 214505 ataattattttatagaaaa 214487
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>gb|AC022367.34| Homo sapiens 12 BAC RP11-685B13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 175184

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 79    taattattttatagaaaaa 97
             |||||||||||||||||||
Sbjct: 17240 taattattttatagaaaaa 17222
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>gb|AC022887.10| Homo sapiens chromosome 8, clone RP11-480L14, complete sequence
          Length = 156238

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 73     tacacataattattttata 91
              |||||||||||||||||||
Sbjct: 155362 tacacataattattttata 155380
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>emb|BX571694.10| Zebrafish DNA sequence from clone CH211-159E21 in linkage group 10,
             complete sequence
          Length = 163542

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 76    acataattattttatagaaaaag 98
             |||||||||||||| ||||||||
Sbjct: 87608 acataattattttaaagaaaaag 87630
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>gb|AC157216.2| Pan troglodytes BAC clone CH251-66E23 from chromosome unknown, complete
              sequence
          Length = 165669

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 70     tattacacataattatttt 88
              |||||||||||||||||||
Sbjct: 109453 tattacacataattatttt 109435
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>gb|AC019274.5|AC019274 Homo sapiens, clone RP11-11P7, complete sequence
          Length = 186752

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 71    attacacataattattttataga 93
             |||||||||||| ||||||||||
Sbjct: 90399 attacacataataattttataga 90377
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 69       atattacacataattattttata 91
                |||||||||||||| ||||||||
Sbjct: 27520749 atattacacataataattttata 27520771
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>gb|AC103778.2| Homo sapiens chromosome 8, clone RP11-463C14, complete sequence
          Length = 161500

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 73    tacacataattattttata 91
             |||||||||||||||||||
Sbjct: 53979 tacacataattattttata 53997
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>gb|AC073533.19| Homo sapiens X BAC RP11-589J20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 182056

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 17    attttacattatcaaacct 35
             |||||||||||||||||||
Sbjct: 72175 attttacattatcaaacct 72193
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>gb|AC078845.2|AC078845 Homo sapiens chromosome 7 clone RP11-707A19, complete sequence
          Length = 161514

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 13    tactattttacattatcaa 31
             |||||||||||||||||||
Sbjct: 24970 tactattttacattatcaa 24952
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>gb|AC115485.3| Homo sapiens chromosome 8, clone GS1-57L11, complete sequence
          Length = 169622

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 71    attacacataattattttataga 93
             |||||||||||| ||||||||||
Sbjct: 13005 attacacataataattttataga 12983
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>gb|AC117471.6| Homo sapiens 3 BAC RP11-558J4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 82165

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 76    acataattattttatagaaaaag 98
             |||||||||||||| ||||||||
Sbjct: 73810 acataattattttaaagaaaaag 73788
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>gb|AC016648.5|AC016648 Homo sapiens chromosome 5 clone RPCI-1_137K24, complete sequence
          Length = 123946

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    atactattttacattatca 30
             |||||||||||||||||||
Sbjct: 30979 atactattttacattatca 30961
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>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5)
          Length = 896449

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 81     attattttatagaaaaagg 99
              |||||||||||||||||||
Sbjct: 612531 attattttatagaaaaagg 612549
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 69       atattacacataattattttata 91
                |||||||||||||| ||||||||
Sbjct: 27446307 atattacacataataattttata 27446329
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>emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa0063N15 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 109222

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 69    atattacacataattattttata 91
             |||||||||||||| ||||||||
Sbjct: 96663 atattacacataataattttata 96685
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>emb|BX664710.2|CNS09SC0 Oryza sativa chromosome 12, . PAC P0243A04 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 78611

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 69    atattacacataattattttata 91
             |||||||||||||| ||||||||
Sbjct: 46245 atattacacataataattttata 46223
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>gb|L78746.1|HUM16DC93Z Homo sapiens (subclone 4_c4 from P1 H16) DNA sequence
          Length = 2976

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 70   tattacacataattatttt 88
            |||||||||||||||||||
Sbjct: 1470 tattacacataattatttt 1488
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>gb|J00271.1|HUMMET2 Human metallothionein-II gene (mt-II) and flanks
          Length = 1703

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 81   attattttatagaaaaagg 99
            |||||||||||||||||||
Sbjct: 1640 attattttatagaaaaagg 1622
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>emb|AL645753.11| Mouse DNA sequence from clone CT7-315N12 on chromosome 3, complete
             sequence
          Length = 145594

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 77    cataattattttatagaaa 95
             |||||||||||||||||||
Sbjct: 34343 cataattattttatagaaa 34361
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>emb|AL645759.11| Mouse DNA sequence from clone RP23-441I10 on chromosome 3, complete
             sequence
          Length = 118244

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 77    cataattattttatagaaa 95
             |||||||||||||||||||
Sbjct: 85125 cataattattttatagaaa 85143


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,443,876
Number of Sequences: 3902068
Number of extensions: 1443876
Number of successful extensions: 118513
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 118215
Number of HSP's gapped (non-prelim): 299
length of query: 99
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 78
effective length of database: 17,151,101,840
effective search space: 1337785943520
effective search space used: 1337785943520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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