ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl31b09 |
|---|---|
| Clone Library Name | barley_pub |
>VPP4_HUMAN (Q9HBG4) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 4 (V-ATPase 116-kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform) Length = 840 Score = 67.8 bits (164), Expect = 1e-11 Identities = 29/31 (93%), Positives = 30/31 (96%) Frame = -2 Query: 437 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSF 345 SAFLHALRLHWVEFQNKFY GDGYKF+PFSF Sbjct: 800 SAFLHALRLHWVEFQNKFYVGDGYKFSPFSF 830
>VPP1_CAEEL (P30628) Probable vacuolar proton translocating ATPase 116 kDa| subunit a (Uncoordinated protein 32) Length = 905 Score = 65.5 bits (158), Expect = 6e-11 Identities = 31/44 (70%), Positives = 34/44 (77%) Frame = -2 Query: 437 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISEDEE*ARPN 306 SAFLHALRLHWVEFQ+KFY G GY+FAPFSF I +E A N Sbjct: 861 SAFLHALRLHWVEFQSKFYGGLGYEFAPFSFEKILAEEREAEEN 904
>VPP1_BOVIN (Q29466) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 838 Score = 65.1 bits (157), Expect = 7e-11 Identities = 29/36 (80%), Positives = 30/36 (83%) Frame = -2 Query: 437 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 330 SAFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 798 SAFLHALRLHWVEFQNKFYSGTGFKFLPFSFEHIRE 833
>VPP1_PONPY (Q5R422) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) Length = 837 Score = 65.1 bits (157), Expect = 7e-11 Identities = 29/36 (80%), Positives = 30/36 (83%) Frame = -2 Query: 437 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 330 SAFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 797 SAFLHALRLHWVEFQNKFYSGTGFKFLPFSFEHIRE 832
>VPP1_HUMAN (Q93050) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 837 Score = 65.1 bits (157), Expect = 7e-11 Identities = 29/36 (80%), Positives = 30/36 (83%) Frame = -2 Query: 437 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 330 SAFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 797 SAFLHALRLHWVEFQNKFYSGTGFKFLPFSFEHIRE 832
>VPP4_MOUSE (Q920R6) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 4 (V-ATPase 116-kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform) Length = 833 Score = 64.7 bits (156), Expect = 1e-10 Identities = 29/36 (80%), Positives = 31/36 (86%) Frame = -2 Query: 437 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 330 SAFLHALRLHWVEFQNKFYEG G KF+PFSF + E Sbjct: 793 SAFLHALRLHWVEFQNKFYEGAGSKFSPFSFKHVLE 828
>VPP1_RAT (P25286) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase su Length = 838 Score = 64.7 bits (156), Expect = 1e-10 Identities = 29/36 (80%), Positives = 30/36 (83%) Frame = -2 Query: 437 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 330 SAFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 798 SAFLHALRLHWVEFQNKFYTGTGFKFLPFSFEHIRE 833
>VPP1_MOUSE (Q9Z1G4) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 839 Score = 64.7 bits (156), Expect = 1e-10 Identities = 29/36 (80%), Positives = 30/36 (83%) Frame = -2 Query: 437 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 330 SAFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 799 SAFLHALRLHWVEFQNKFYTGTGFKFLPFSFEHIRE 834
>VPP2_MOUSE (P15920) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7) Length = 856 Score = 64.3 bits (155), Expect = 1e-10 Identities = 28/35 (80%), Positives = 31/35 (88%) Frame = -2 Query: 437 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALIS 333 SAFLHA+RLHWVEFQNKFY G G KF PFSF+L+S Sbjct: 812 SAFLHAIRLHWVEFQNKFYVGAGTKFVPFSFSLLS 846
>VPP2_HUMAN (Q9Y487) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 2 (V-ATPase 116-kDa isoform a2) (TJ6) Length = 856 Score = 64.3 bits (155), Expect = 1e-10 Identities = 28/35 (80%), Positives = 31/35 (88%) Frame = -2 Query: 437 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALIS 333 SAFLHA+RLHWVEFQNKFY G G KF PFSF+L+S Sbjct: 812 SAFLHAIRLHWVEFQNKFYVGAGTKFVPFSFSLLS 846
>VPP3_HUMAN (Q13488) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 3 (V-ATPase 116-kDa isoform a3) (Osteoclastic proton pump 116 kDa subunit) (OC-116 kDa) (OC116) (T-cell immune regulator 1) (T cell immune response cDNA7 protein) (TIRC7) Length = 830 Score = 63.9 bits (154), Expect = 2e-10 Identities = 27/32 (84%), Positives = 29/32 (90%) Frame = -2 Query: 437 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSFA 342 SAFLHALRLHWVEFQNKFY G GYK +PF+FA Sbjct: 795 SAFLHALRLHWVEFQNKFYSGTGYKLSPFTFA 826
>VPP2_BOVIN (O97681) Vacuolar proton translocating ATPase 116 kDa subunit A| isoform 2 (V-ATPase 116-kDa isoform a2) Length = 854 Score = 63.5 bits (153), Expect = 2e-10 Identities = 28/35 (80%), Positives = 30/35 (85%) Frame = -2 Query: 437 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALIS 333 SAFLHA+RLHWVEFQNKFY G G KF PFSF L+S Sbjct: 812 SAFLHAIRLHWVEFQNKFYVGAGTKFVPFSFRLLS 846
>STV1_YEAST (P37296) Vacuolar ATP synthase subunit a, Golgi isoform (EC| 3.6.3.14) (V-ATPase 101 kDa subunit) (V-ATPase subunit AC115) (Similar to VPH1 protein 1) Length = 890 Score = 55.8 bits (133), Expect = 4e-08 Identities = 24/36 (66%), Positives = 28/36 (77%) Frame = -2 Query: 437 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 330 SA LHALRLHWVE +KF+EG+GY + PFSF I E Sbjct: 855 SAMLHALRLHWVEAMSKFFEGEGYAYEPFSFRAIIE 890
>VPH1_SCHPO (O13742) Probable vacuolar ATP synthase 91 kDa subunit (Vacuolar| ATPase 91 kDa subunit) Length = 805 Score = 52.0 bits (123), Expect = 6e-07 Identities = 21/36 (58%), Positives = 28/36 (77%) Frame = -2 Query: 437 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 330 SA LH+LRLHWVE +K +EG+GY F PF+F + +E Sbjct: 770 SAMLHSLRLHWVEGMSKHFEGEGYAFTPFTFKVTAE 805
>VATI_METJA (Q57675) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 695 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/28 (67%), Positives = 25/28 (89%) Frame = -2 Query: 434 AFLHALRLHWVEFQNKFYEGDGYKFAPF 351 AF+H+LRLH+VEF ++FYEG G KF+PF Sbjct: 659 AFIHSLRLHYVEFFSQFYEGGGKKFSPF 686
>VPH1_YEAST (P32563) Vacuolar ATP synthase subunit a, vacuolar isoform (EC| 3.6.3.14) (V-ATPase a subunit) (Vacuolar proton pump a subunit) (V-ATPase 95 kDa subunit) (Vacuolar pH protein 1) Length = 839 Score = 45.8 bits (107), Expect = 5e-05 Identities = 18/31 (58%), Positives = 24/31 (77%) Frame = -2 Query: 437 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSF 345 SA LH+LRLHWVE +KF+ G+G + PF+F Sbjct: 791 SAMLHSLRLHWVESMSKFFVGEGLPYEPFAF 821
>VATI_PYRHO (O57721) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 659 Score = 45.4 bits (106), Expect = 6e-05 Identities = 19/29 (65%), Positives = 23/29 (79%) Frame = -2 Query: 434 AFLHALRLHWVEFQNKFYEGDGYKFAPFS 348 AF+HALRLH+VEF FY G+G KF PF+ Sbjct: 619 AFVHALRLHYVEFFGTFYSGEGRKFEPFA 647
>VATI_PYRAB (Q9UXU2) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 659 Score = 45.4 bits (106), Expect = 6e-05 Identities = 19/29 (65%), Positives = 23/29 (79%) Frame = -2 Query: 434 AFLHALRLHWVEFQNKFYEGDGYKFAPFS 348 AF+HALRLH+VEF FY G+G KF PF+ Sbjct: 619 AFVHALRLHYVEFFGTFYSGEGRKFEPFA 647
>VATI_PYRKO (Q5JDS2) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 663 Score = 43.9 bits (102), Expect = 2e-04 Identities = 18/28 (64%), Positives = 22/28 (78%) Frame = -2 Query: 434 AFLHALRLHWVEFQNKFYEGDGYKFAPF 351 AF+HALRLH+VEF FY G+G +F PF Sbjct: 623 AFVHALRLHYVEFFGTFYSGEGKRFEPF 650
>VATI_METMA (O59659) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 649 Score = 43.1 bits (100), Expect = 3e-04 Identities = 19/28 (67%), Positives = 21/28 (75%) Frame = -2 Query: 428 LHALRLHWVEFQNKFYEGDGYKFAPFSF 345 LHALRL +VEF KFYEG G KF PF + Sbjct: 615 LHALRLQYVEFFGKFYEGGGRKFNPFGY 642
>VATI_HALSA (Q9HND8) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 722 Score = 43.1 bits (100), Expect = 3e-04 Identities = 20/31 (64%), Positives = 23/31 (74%) Frame = -2 Query: 437 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSF 345 SA L ALRL +VEF NKFYEG G K+ PF + Sbjct: 684 SAGLQALRLEYVEFFNKFYEGGGEKYNPFGY 714
>VPH1_NEUCR (Q01290) Vacuolar ATP synthase 98 kDa subunit (Vacuolar ATPase 98| kDa subunit) Length = 856 Score = 42.4 bits (98), Expect = 5e-04 Identities = 21/39 (53%), Positives = 25/39 (64%) Frame = -2 Query: 437 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISEDEE 321 SA LH+LRL WVE +KF E G+ F PFSF E+ E Sbjct: 811 SAMLHSLRLAWVESFSKFAEFGGWPFTPFSFKQQLEESE 849
>VATI_ARCFU (O29106) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 676 Score = 35.8 bits (81), Expect = 0.047 Identities = 15/26 (57%), Positives = 19/26 (73%) Frame = -2 Query: 428 LHALRLHWVEFQNKFYEGDGYKFAPF 351 L +LRLH+VEF KF+EG G + PF Sbjct: 642 LQSLRLHYVEFFTKFFEGGGRLYEPF 667
>NTPI_ENTHR (P43439) V-type sodium ATP synthase subunit I (EC 3.6.3.15)| (Na(+)-translocating ATPase subunit I) Length = 664 Score = 35.4 bits (80), Expect = 0.062 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = -2 Query: 437 SAFLHALRLHWVEFQNKFYEGDGYKFAP 354 SA++H RL +VEF KFY G G F P Sbjct: 622 SAYVHGARLQYVEFFGKFYTGGGRSFKP 649
>VATI_SULSO (Q9UWW3) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 701 Score = 34.7 bits (78), Expect = 0.11 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = -2 Query: 431 FLHALRLHWVEFQNKFYEGDGYKFAP 354 F+ LRLH+ E +KFYEG G KF P Sbjct: 668 FIQDLRLHFYEMFSKFYEGRGRKFEP 693
>VATI_AERPE (Q9YEA0) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 686 Score = 34.3 bits (77), Expect = 0.14 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -2 Query: 434 AFLHALRLHWVEFQNKFYEGDGYKFAP 354 AF HA RLH+ E+ +KFY G G + P Sbjct: 645 AFAHASRLHFYEWFSKFYSGTGVPYTP 671
>VATI_METTH (O27041) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 658 Score = 33.1 bits (74), Expect = 0.31 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = -2 Query: 434 AFLHALRLHWVEFQNKFYEGDGYKFAPF 351 AF+++LRLH+VEF +FY G KF F Sbjct: 620 AFINSLRLHYVEFFAQFYMGGKNKFNAF 647
>VATI_THEAC (Q9HM61) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 637 Score = 30.8 bits (68), Expect = 1.5 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -2 Query: 428 LHALRLHWVEFQNKFYEGDGYKFAPF 351 + RL +VEF +KFY G+G F PF Sbjct: 595 IQGARLIYVEFFSKFYHGNGRMFRPF 620
>VATI_CHLPN (Q9Z990) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 660 Score = 28.9 bits (63), Expect = 5.8 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = -2 Query: 428 LHALRLHWVEFQNKFYEGDGYKFAPFSFALISEDEE 321 +H LRL+++E+ + ++G G P + SED E Sbjct: 613 IHGLRLNFIEWYHYSFDGGGRPLRPLRKIVCSEDAE 648
>RHG25_HUMAN (P42331) Rho-GTPase-activating protein 25| Length = 638 Score = 28.5 bits (62), Expect = 7.6 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = -2 Query: 332 EDEE*ARPNSCIYCSLCNILRVALLPEQS 246 +DEE +P C+Y C I +A PE++ Sbjct: 72 KDEEDTKPQGCMYLPGCTIKEIATNPEEA 100
>ZAP1_YEAST (P47043) Zinc-responsive transcriptional regulator ZAP1| Length = 880 Score = 28.1 bits (61), Expect = 9.9 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = +1 Query: 178 KMMLHHPHSNKGLGFYD*SVTNNDCSGNKATRKILQRLQ*IQEFGRAHSSSSLISANENG 357 K + HH H+N G G D S T N+ +GN+ +L + R + ++L +N N Sbjct: 399 KHINHHDHNNAGNG-CDGSSTGNNENGNQTMNLLLSSI------NRCNPKNNLNGSNNNT 451 Query: 358 A 360 A Sbjct: 452 A 452 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,556,649 Number of Sequences: 219361 Number of extensions: 1325272 Number of successful extensions: 3398 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 3341 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3397 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
