ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl31b02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY009938.2| Hordeum vulgare subsp. vulgare MLA1-2 (Mla1-2) ge... 648 0.0
2gb|AY266445.1| Hordeum vulgare MLA10 (Mla10) mRNA, complete cds 297 2e-77
3gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence 262 9e-67
4emb|AJ302299.1|HVU302299 Hordeum vulgare genomic sequence, clone... 66 1e-07
5emb|AJ302298.1|HVU302298 Hordeum vulgare genomic sequence, clone... 66 1e-07
6emb|AJ302292.1|HVU302292 Hordeum vulgare mRNA for MLA6 protein 54 4e-04
7gb|AF538039.2| Triticum aestivum Mal-like protein mRNA, complete... 50 0.007
8gb|AY266444.1| Hordeum vulgare MLA7 (Mla7) mRNA, complete cds 46 0.11
9gb|AY009939.1| Hordeum vulgare Mla1 (Mla1) mRNA, complete cds 46 0.11
10gb|AC002978.1| Homo sapiens 12 PAC P336P3 (Research Park Cancer ... 44 0.42
11emb|AL929081.20| Human DNA sequence from clone XX-163C1 on chrom... 42 1.6
12emb|CR847858.15| Zebrafish DNA sequence from clone DKEY-78H3 in ... 42 1.6
13emb|CR812469.6| Zebrafish DNA sequence from clone DKEY-286F3 in ... 42 1.6
14emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, ... 42 1.6
15emb|AL078467.1|ATF27G19 Arabidopsis thaliana DNA chromosome 4, B... 42 1.6
16emb|AL030978.1|ATM4I22 Arabidopsis thaliana DNA chromosome 4, P1... 42 1.6
17gb|AC079227.12| Homo sapiens BAC clone RP11-80B23 from 4, comple... 42 1.6
18gb|AC139218.10| Mus musculus chromosome 15, clone RP23-456O10, c... 40 6.5
19gb|AC125359.4| Mus musculus BAC clone RP23-102I17 from chromosom... 40 6.5
20gb|AC158750.5| Mus musculus chromosome 15, clone RP24-222C16, co... 40 6.5
21emb|AL158157.8| Human DNA sequence from clone RP11-413D24 on chr... 40 6.5
22emb|AL596165.1| Listeria innocua Clip11262 complete genome, segm... 40 6.5
23gb|AC020934.9| Homo sapiens chromosome 19 clone CTD-2265O21, com... 40 6.5
24gb|AC022017.8| Homo sapiens chromosome 10 clone RP11-210G22, com... 40 6.5
25gb|AC092048.2| Homo sapiens chromosome 3 clone RP11-241P3, compl... 40 6.5
26gb|AC006060.1| Homo sapiens 3 PAC RPCI4-736H12 (Roswell Park Can... 40 6.5
27emb|BX511178.6| Zebrafish DNA sequence from clone DKEY-221H15 in... 40 6.5
28dbj|AP002856.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.5
29gb|CP000177.1| Drosophila melanogaster genomic scaffold 21100002... 40 6.5
30emb|AL929492.6| Zebrafish DNA sequence from clone CH211-155K1, c... 40 6.5 
>gb|AY009938.2| Hordeum vulgare subsp. vulgare MLA1-2 (Mla1-2) gene, partial cds; and
            MLA1 (Mla1) gene, complete cds
          Length = 18958

 Score =  648 bits (327), Expect = 0.0
 Identities = 346/355 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    gagtcaaagttgttttcgaattaaggagctcgggtgagcctagaatttcagtcgttacaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4148 gagtcaaagttgttttcgaattaaggagctcgggtgagcctagaatttcagtcattacaa 4089

                                                                        
Query: 61   acatgataatacacccttaggtttgtccggttgagatnnnnnnnngcatcaacactacaa 120
            |||||||||||||||||||||||||||||||||||||        |||||||||||||||
Sbjct: 4088 acatgataatacacccttaggtttgtccggttgagataaaaaaaagcatcaacactacaa 4029

                                                                        
Query: 121  cacttttaaatggctctcataaacaacagagcaacttactacaacacttttacttagtcc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4028 cacttttaaatggctctcataaacaacagagcaacttactacaacacttttacttagtcc 3969

                                                                        
Query: 181  gttagaagaaaaaacaagcaacatttctttatgcaaacgacaaaccagccatcccatcag 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3968 gttagaagaaaaaacaagcaacatttctttatgcaaacgacaaaccagccatcccatcag 3909

                                                                        
Query: 241  taggagcggatcacacaacttccagcaaaactcggaaccttttcatccttcaaatttttg 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3908 taggagcggatcacacaacttccagcaaaactcggaaccttttcatccttcaaatttttg 3849

                                                                   
Query: 301  catgactggtgcccacccaacggttgcgaaacatctcagacgccgctggtacctg 355
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3848 catgactggtgcccacccaacggttgcgaaacatctcagacgccgctggtacctg 3794



 Score =  165 bits (83), Expect = 2e-37
 Identities = 83/83 (100%)
 Strand = Plus / Minus

                                                                        
Query: 351  acctgaagcaatgtcagtcaatctgcatcagaagtcgatcctcaaaccaggtaatcacat 410
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3370 acctgaagcaatgtcagtcaatctgcatcagaagtcgatcctcaaaccaggtaatcacat 3311

                                   
Query: 411  taaatcgtcatcttgagcacctt 433
            |||||||||||||||||||||||
Sbjct: 3310 taaatcgtcatcttgagcacctt 3288



 Score =  103 bits (52), Expect = 5e-19
 Identities = 52/52 (100%)
 Strand = Plus / Minus

                                                                
Query: 429  accttctgctatatacgggaacatggaaattgcaatcgcgggatggttggga 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3180 accttctgctatatacgggaacatggaaattgcaatcgcgggatggttggga 3129
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>gb|AY266445.1| Hordeum vulgare MLA10 (Mla10) mRNA, complete cds
          Length = 3611

 Score =  297 bits (150), Expect = 2e-77
 Identities = 203/218 (93%), Gaps = 2/218 (0%)
 Strand = Plus / Minus

                                                                        
Query: 133  gctctcataaacaacagagcaacttactacaacacttttacttagtccgttagaagaaaa 192
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3562 gctctcataaacaacagagcaacttactacaacacttttacttagtccgttagaagaaaa 3503

                                                                        
Query: 193  aacaagcaacatttctttatgcaaacgacaaaccagccatcccatcagtaggagcggatc 252
            |||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| | |||
Sbjct: 3502 aacaagcaacatttctttatgcaaacgaaaaaccggccatcccatcagaaggagggcatc 3443

                                                                        
Query: 253  acacaacttccagcaaaactcggaaccttttcatccttcaaatttttgcatgactggtgc 312
            |||||||||||||| |||||| |||||||||| |||||||||||||||||||| || |||
Sbjct: 3442 acacaacttccagcgaaactcagaaccttttc-tccttcaaatttttgcatgattgctgc 3384

                                                  
Query: 313  ccaccc-aacggttgcgaaacatctcagacgccgctgg 349
            |||||| |||| ||  ||||||||||||||||| ||||
Sbjct: 3383 ccacccaaacgtttctgaaacatctcagacgccactgg 3346



 Score =  151 bits (76), Expect = 2e-33
 Identities = 124/140 (88%)
 Strand = Plus / Minus

                                                                        
Query: 341  cgccgctggtacctgaagcaatgtcagtcaatctgcatcagaagtcgatcctcaaaccag 400
            |||| ||| |||||||| |||||||||||||||||  |||||| ||||| ||| || |||
Sbjct: 3333 cgcccctgttacctgaatcaatgtcagtcaatctgggtcagaaatcgatactcgaatcag 3274

                                                                        
Query: 401  gtaatcacattaaatcgtcatcttgagcaccttctgctatatacgggaacatggaaattg 460
            |||||||||||||||||||||||||||||||||||||||||  ||||  |||| ||||||
Sbjct: 3273 gtaatcacattaaatcgtcatcttgagcaccttctgctataggcgggtgcatgaaaattg 3214

                                
Query: 461  caatcgcgggatggttggga 480
            |||||  |||||||||||||
Sbjct: 3213 caatctggggatggttggga 3194
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>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score =  262 bits (132), Expect = 9e-67
 Identities = 184/200 (92%), Gaps = 1/200 (0%)
 Strand = Plus / Minus

                                                                          
Query: 145    aacagagcaacttactacaacacttttacttagtccgttagaagaaaaaacaagcaacat 204
              |||||||||||||||||||||| |||||||| ||||  ||||||||||| ||||||||||
Sbjct: 126058 aacagagcaacttactacaacaattttacttggtccaatagaagaaaaa-caagcaacat 126000

                                                                          
Query: 205    ttctttatgcaaacgacaaaccagccatcccatcagtaggagcggatcacacaacttcca 264
              |||||||||||||||||||||||| ||||||||||| ||||| | ||||||||| |||||
Sbjct: 125999 ttctttatgcaaacgacaaaccagtcatcccatcagaaggagtgcatcacacaagttcca 125940

                                                                          
Query: 265    gcaaaactcggaaccttttcatccttcaaatttttgcatgactggtgcccacccaacggt 324
              |  |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |
Sbjct: 125939 gtgaaactcggaacctttttatccttcaaatatttgcatgactggtgcccacccaacgtt 125880

                                  
Query: 325    tgcgaaacatctcagacgcc 344
              | ||||||||||||||||||
Sbjct: 125879 tccgaaacatctcagacgcc 125860



 Score =  262 bits (132), Expect = 9e-67
 Identities = 184/200 (92%), Gaps = 1/200 (0%)
 Strand = Plus / Minus

                                                                         
Query: 145   aacagagcaacttactacaacacttttacttagtccgttagaagaaaaaacaagcaacat 204
             |||||||||||||||||||||| |||||||| ||||  ||||||||||| ||||||||||
Sbjct: 86345 aacagagcaacttactacaacaattttacttggtccaatagaagaaaaa-caagcaacat 86287

                                                                         
Query: 205   ttctttatgcaaacgacaaaccagccatcccatcagtaggagcggatcacacaacttcca 264
             |||||||||||||||||||||||| ||||||||||| ||||| | ||||||||| |||||
Sbjct: 86286 ttctttatgcaaacgacaaaccagtcatcccatcagaaggagtgcatcacacaagttcca 86227

                                                                         
Query: 265   gcaaaactcggaaccttttcatccttcaaatttttgcatgactggtgcccacccaacggt 324
             |  |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |
Sbjct: 86226 gtgaaactcggaacctttttatccttcaaatatttgcatgactggtgcccacccaacgtt 86167

                                 
Query: 325   tgcgaaacatctcagacgcc 344
             | ||||||||||||||||||
Sbjct: 86166 tccgaaacatctcagacgcc 86147



 Score =  133 bits (67), Expect = 6e-28
 Identities = 79/83 (95%)
 Strand = Plus / Minus

                                                                          
Query: 351    acctgaagcaatgtcagtcaatctgcatcagaagtcgatcctcaaaccaggtaatcacat 410
              ||||||||||||| |||||| |||||||||||| ||||||||| ||||||||||||||||
Sbjct: 125316 acctgaagcaatgccagtcactctgcatcagaaatcgatcctccaaccaggtaatcacat 125257

                                     
Query: 411    taaatcgtcatcttgagcacctt 433
              |||||||||||||||||||||||
Sbjct: 125256 taaatcgtcatcttgagcacctt 125234



 Score =  133 bits (67), Expect = 6e-28
 Identities = 79/83 (95%)
 Strand = Plus / Minus

                                                                         
Query: 351   acctgaagcaatgtcagtcaatctgcatcagaagtcgatcctcaaaccaggtaatcacat 410
             ||||||||||||| |||||| |||||||||||| ||||||||| ||||||||||||||||
Sbjct: 85603 acctgaagcaatgccagtcactctgcatcagaaatcgatcctccaaccaggtaatcacat 85544

                                    
Query: 411   taaatcgtcatcttgagcacctt 433
             |||||||||||||||||||||||
Sbjct: 85543 taaatcgtcatcttgagcacctt 85521



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                  
Query: 12     gttttcgaattaaggagctcgggtgagcctagaatttcagtcgttacaaaca 63
              ||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 132202 gttttcgaattaaggagctcgggtgagcccagaatttcagtcattacaaaca 132151



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                 
Query: 12    gttttcgaattaaggagctcgggtgagcctagaatttcagtcgttacaaaca 63
             ||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 92489 gttttcgaattaaggagctcgggtgagcccagaatttcagtcattacaaaca 92438



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                       
Query: 424    tgagcaccttctgctatatacgggaacatggaaattgcaatcgcgggatggttggga 480
              |||| |||||||||||||| |||||||||| ||||| ||| ||||| ||||||||||
Sbjct: 125135 tgagtaccttctgctatatgcgggaacatgtaaatttcaaccgcggaatggttggga 125079



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                      
Query: 424   tgagcaccttctgctatatacgggaacatggaaattgcaatcgcgggatggttggga 480
             |||| |||||||||||||| |||||||||| ||||| ||| ||||| ||||||||||
Sbjct: 85422 tgagtaccttctgctatatgcgggaacatgtaaatttcaaccgcggaatggttggga 85366



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                 
Query: 63     atgataatacacccttaggtttgtccggttgagat 97
              ||||||||||||||| |||||||||||||| ||||
Sbjct: 126163 atgataatacaccctcaggtttgtccggttcagat 126129



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 63    atgataatacacccttaggtttgtccggttgagat 97
             ||||||||||||||| |||||||||||||| ||||
Sbjct: 86450 atgataatacaccctcaggtttgtccggttcagat 86416
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>emb|AJ302299.1|HVU302299 Hordeum vulgare genomic sequence, clone BAC 711N16, isolate Mla-RGH1f
          Length = 2853

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                     
Query: 424  tgagcaccttctgctatatacgggaacatggaaattgcaatcgcgggatggttggga 480
            |||| |||||||||||||| |||||||||| ||||| ||| ||||| ||||||||||
Sbjct: 2837 tgagtaccttctgctatatgcgggaacatgtaaatttcaaccgcggaatggttggga 2781
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>emb|AJ302298.1|HVU302298 Hordeum vulgare genomic sequence, clone BAC 80H14, isolate Mla-RGH1e
          Length = 2853

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                     
Query: 424  tgagcaccttctgctatatacgggaacatggaaattgcaatcgcgggatggttggga 480
            |||| |||||||||||||| |||||||||| ||||| ||| ||||| ||||||||||
Sbjct: 2837 tgagtaccttctgctatatgcgggaacatgtaaatttcaaccgcggaatggttggga 2781
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>emb|AJ302292.1|HVU302292 Hordeum vulgare mRNA for MLA6 protein
          Length = 2871

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 412  aaatcgtcatcttgagcaccttctgctatatacgg 446
            ||||||||||| |||||||||||||||||| ||||
Sbjct: 2846 aaatcgtcatcatgagcaccttctgctatacacgg 2812
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>gb|AF538039.2| Triticum aestivum Mal-like protein mRNA, complete cds
          Length = 2855

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 412  aaatcgtcatcttgagcaccttctgctatatacggga 448
            ||||||||||| |||||| |||||||||||| |||||
Sbjct: 2406 aaatcgtcatcatgagcatcttctgctatatccggga 2370



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 250  atcacacaacttccagcaaa 269
            ||||||||||||||||||||
Sbjct: 2592 atcacacaacttccagcaaa 2573
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>gb|AY266444.1| Hordeum vulgare MLA7 (Mla7) mRNA, complete cds
          Length = 3761

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 412  aaatcgtcatcttgagcaccttctgctatatacgg 446
            ||||| ||||| |||||||||||||||||| ||||
Sbjct: 3268 aaatcatcatcatgagcaccttctgctatacacgg 3234
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>gb|AY009939.1| Hordeum vulgare Mla1 (Mla1) mRNA, complete cds
          Length = 3380

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 412  aaatcgtcatcttgagcaccttctgctatat 442
            ||||||||||| |||||||||| ||||||||
Sbjct: 3081 aaatcgtcatcatgagcaccttttgctatat 3051
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>gb|AC002978.1| Homo sapiens 12 PAC P336P3 (Research Park Cancer Institute Human Genome
             PAC library) complete sequence
          Length = 102591

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 183   tagaagaaaaaacaagcaacat 204
             ||||||||||||||||||||||
Sbjct: 90782 tagaagaaaaaacaagcaacat 90761
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>emb|AL929081.20| Human DNA sequence from clone XX-163C1 on chromosome 13, complete
            sequence
          Length = 13668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 278  ccttttcatccttcaaatttt 298
            |||||||||||||||||||||
Sbjct: 5110 ccttttcatccttcaaatttt 5090
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>emb|CR847858.15| Zebrafish DNA sequence from clone DKEY-78H3 in linkage group 5,
             complete sequence
          Length = 255113

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 253   acacaacttccagcaaaactc 273
             |||||||||||||||||||||
Sbjct: 21251 acacaacttccagcaaaactc 21231
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>emb|CR812469.6| Zebrafish DNA sequence from clone DKEY-286F3 in linkage group 5, complete
              sequence
          Length = 162086

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 253    acacaacttccagcaaaactc 273
              |||||||||||||||||||||
Sbjct: 138012 acacaacttccagcaaaactc 137992
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>emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 67
          Length = 200001

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 288  cttcaaatttttgcatgactg 308
            |||||||||||||||||||||
Sbjct: 9760 cttcaaatttttgcatgactg 9740
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>emb|AL078467.1|ATF27G19 Arabidopsis thaliana DNA chromosome 4, BAC clone F27G19 (ESSA project)
          Length = 82381

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 288   cttcaaatttttgcatgactg 308
             |||||||||||||||||||||
Sbjct: 22866 cttcaaatttttgcatgactg 22846
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>emb|AL030978.1|ATM4I22 Arabidopsis thaliana DNA chromosome 4, P1 clone M4I22 (ESSA project)
          Length = 83371

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 288   cttcaaatttttgcatgactg 308
             |||||||||||||||||||||
Sbjct: 75286 cttcaaatttttgcatgactg 75266
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>gb|AC079227.12| Homo sapiens BAC clone RP11-80B23 from 4, complete sequence
          Length = 181942

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 279   cttttcatccttcaaattttt 299
             |||||||||||||||||||||
Sbjct: 18953 cttttcatccttcaaattttt 18973
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>gb|AC139218.10| Mus musculus chromosome 15, clone RP23-456O10, complete sequence
          Length = 163749

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 182    ttagaagaaaaaacaagcaacatttctt 209
              ||||||||||||| | ||||||||||||
Sbjct: 119234 ttagaagaaaaaatatgcaacatttctt 119207
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>gb|AC125359.4| Mus musculus BAC clone RP23-102I17 from chromosome 14, complete
             sequence
          Length = 192163

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   agaagaaaaaacaagcaaca 203
             ||||||||||||||||||||
Sbjct: 91429 agaagaaaaaacaagcaaca 91410
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>gb|AC158750.5| Mus musculus chromosome 15, clone RP24-222C16, complete sequence
          Length = 128868

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 182    ttagaagaaaaaacaagcaacatttctt 209
              ||||||||||||| | ||||||||||||
Sbjct: 122041 ttagaagaaaaaatatgcaacatttctt 122068
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>emb|AL158157.8| Human DNA sequence from clone RP11-413D24 on chromosome 9, complete
              sequence
          Length = 183410

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 423    ttgagcaccttctgctatat 442
              ||||||||||||||||||||
Sbjct: 177199 ttgagcaccttctgctatat 177180
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>emb|AL596165.1| Listeria innocua Clip11262 complete genome, segment 3/12
          Length = 249050

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 448   aacatggaaattgcaatcgc 467
             ||||||||||||||||||||
Sbjct: 65245 aacatggaaattgcaatcgc 65264
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>gb|AC020934.9| Homo sapiens chromosome 19 clone CTD-2265O21, complete sequence
          Length = 119347

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 278   ccttttcatccttcaaatttttgc 301
             |||| |||||||||||||||||||
Sbjct: 81414 ccttctcatccttcaaatttttgc 81391
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>gb|AC022017.8| Homo sapiens chromosome 10 clone RP11-210G22, complete sequence
          Length = 180165

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  tcatccttcaaatttttgca 302
            ||||||||||||||||||||
Sbjct: 9319 tcatccttcaaatttttgca 9300
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>gb|AC092048.2| Homo sapiens chromosome 3 clone RP11-241P3, complete sequence
          Length = 155663

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    atcacacaacttccagcaaa 269
              ||||||||||||||||||||
Sbjct: 145154 atcacacaacttccagcaaa 145173
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>gb|AC006060.1| Homo sapiens 3 PAC RPCI4-736H12 (Roswell Park Cancer Institute Human PAC
              Library) complete sequence
          Length = 135039

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    atcacacaacttccagcaaa 269
              ||||||||||||||||||||
Sbjct: 104366 atcacacaacttccagcaaa 104385
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>emb|BX511178.6| Zebrafish DNA sequence from clone DKEY-221H15 in linkage group 20,
             complete sequence
          Length = 187362

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   aaaacaagcaacatttcttt 210
             ||||||||||||||||||||
Sbjct: 15500 aaaacaagcaacatttcttt 15519
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>dbj|AP002856.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-816H13, complete
             sequence
          Length = 227942

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   ttagaagaaaaaacaagcaa 201
             ||||||||||||||||||||
Sbjct: 90839 ttagaagaaaaaacaagcaa 90820
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>gb|CP000177.1| Drosophila melanogaster genomic scaffold 211000022280100
          Length = 63632

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 181   gttagaagaaaaaacaagcaacat 204
             |||||||||||||| |||||||||
Sbjct: 39829 gttagaagaaaaaataagcaacat 39806
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>emb|AL929492.6| Zebrafish DNA sequence from clone CH211-155K1, complete sequence
          Length = 157062

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    aacaagcaacatttctttat 212
              ||||||||||||||||||||
Sbjct: 153786 aacaagcaacatttctttat 153767


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,404,459
Number of Sequences: 3902068
Number of extensions: 4404459
Number of successful extensions: 78738
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78664
Number of HSP's gapped (non-prelim): 68
length of query: 480
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 458
effective length of database: 17,147,199,772
effective search space: 7853417495576
effective search space used: 7853417495576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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