Clone Name | rbastl31a10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | IF4E3_ARATH (Q9FK59) Eukaryotic translation initiation factor 4E... | 68 | 5e-12 | 2 | IF4E4_CAEEL (Q22888) Eukaryotic translation initiation factor 4E... | 37 | 0.013 |
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>IF4E3_ARATH (Q9FK59) Eukaryotic translation initiation factor 4E type 3 (eIF4E| type 3) (eIF-4E type 3) (mRNA cap-binding protein type 3) (Novel cap-binding protein) (nCBP) Length = 221 Score = 68.2 bits (165), Expect = 5e-12 Identities = 29/31 (93%), Positives = 30/31 (96%) Frame = -1 Query: 254 LKLPHTYLMEYKPHDASLRDNSSYRNTWLRG 162 LKLPH Y+MEYKPHDASLRDNSSYRNTWLRG Sbjct: 191 LKLPHAYVMEYKPHDASLRDNSSYRNTWLRG 221
>IF4E4_CAEEL (Q22888) Eukaryotic translation initiation factor 4E-4 (eIF4E-4)| (eIF-4E-4) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 212 Score = 37.0 bits (84), Expect = 0.013 Identities = 16/27 (59%), Positives = 20/27 (74%) Frame = -1 Query: 254 LKLPHTYLMEYKPHDASLRDNSSYRNT 174 L+LP ++EYK HD LRD SSYR+T Sbjct: 180 LQLPQNTVLEYKRHDDCLRDQSSYRHT 206 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,551,758 Number of Sequences: 219361 Number of extensions: 631365 Number of successful extensions: 1333 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1324 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1333 length of database: 80,573,946 effective HSP length: 60 effective length of database: 67,412,286 effective search space used: 1617894864 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)