>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  101 bits (51), Expect = 1e-18
 Identities = 90/103 (87%)
 Strand = Plus / Plus

                                                                           
Query: 151     catggaggttaacctctcagccatgtgttcctgtaggacgagttgtctcgcagcgaggca 210
               ||||||| ||| ||||||| ||| ||||||||||| || ||||| || ||||| || |||
Sbjct: 8569593 catggagcttatcctctcaaccacgtgttcctgtaagatgagttatcccgcagtgaagca 8569652

                                                          
Query: 211     tcatgtggtttgtactccatcaaataggtgtgcggcagcttca 253
               |||||||||||||||||||||| |||| |||| ||||||||||
Sbjct: 8569653 tcatgtggtttgtactccatcagatagctgtgtggcagcttca 8569695

>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02,
             complete sequence
          Length = 137327

 Score =  101 bits (51), Expect = 1e-18
 Identities = 90/103 (87%)
 Strand = Plus / Plus

                                                                         
Query: 151   catggaggttaacctctcagccatgtgttcctgtaggacgagttgtctcgcagcgaggca 210
             ||||||| ||| ||||||| ||| ||||||||||| || ||||| || ||||| || |||
Sbjct: 50565 catggagcttatcctctcaaccacgtgttcctgtaagatgagttatcccgcagtgaagca 50624

                                                        
Query: 211   tcatgtggtttgtactccatcaaataggtgtgcggcagcttca 253
             |||||||||||||||||||||| |||| |||| ||||||||||
Sbjct: 50625 tcatgtggtttgtactccatcagatagctgtgtggcagcttca 50667

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  101 bits (51), Expect = 1e-18
 Identities = 90/103 (87%)
 Strand = Plus / Plus

                                                                           
Query: 151     catggaggttaacctctcagccatgtgttcctgtaggacgagttgtctcgcagcgaggca 210
               ||||||| ||| ||||||| ||| ||||||||||| || ||||| || ||||| || |||
Sbjct: 8567428 catggagcttatcctctcaaccacgtgttcctgtaagatgagttatcccgcagtgaagca 8567487

                                                          
Query: 211     tcatgtggtttgtactccatcaaataggtgtgcggcagcttca 253
               |||||||||||||||||||||| |||| |||| ||||||||||
Sbjct: 8567488 tcatgtggtttgtactccatcagatagctgtgtggcagcttca 8567530

>dbj|AK059989.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A08, full
           insert sequence
          Length = 923

 Score =  101 bits (51), Expect = 1e-18
 Identities = 90/103 (87%)
 Strand = Plus / Minus

                                                                       
Query: 151 catggaggttaacctctcagccatgtgttcctgtaggacgagttgtctcgcagcgaggca 210
           ||||||| ||| ||||||| ||| ||||||||||| || ||||| || ||||| || |||
Sbjct: 776 catggagcttatcctctcaaccacgtgttcctgtaagatgagttatcccgcagtgaagca 717

                                                      
Query: 211 tcatgtggtttgtactccatcaaataggtgtgcggcagcttca 253
           |||||||||||||||||||||| |||| |||| ||||||||||
Sbjct: 716 tcatgtggtttgtactccatcagatagctgtgtggcagcttca 674

>gb|AC156827.4| Medicago truncatula clone mth2-15c17, complete sequence
          Length = 110578

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                         
Query: 163   cctctcagccatgtgttcctgtaggacgagttgtctcgcagcgaggcatcatgtggtttg 222
             ||||||| ||| ||||||||||| || || |||||||| || || |||||||||||||||
Sbjct: 90770 cctctcaaccaagtgttcctgtaagatgaattgtctcgaagagaagcatcatgtggtttg 90711

                     
Query: 223   tactccat 230
             ||||||||
Sbjct: 90710 tactccat 90703

>ref|NM_121816.2| Arabidopsis thaliana NCBP (NOVEL CAP-BINDING PROTEIN); RNA binding
           / translation initiation factor AT5G18110 (NCBP) mRNA,
           complete cds
          Length = 1120

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 163 cctctcagccatgtgttcctgtaggacgagttgtctcgcagcgaggcatcatgtggtttg 222
           ||||||||||||||||| |||||||| |||||||| || || || ||||| ||||| |||
Sbjct: 755 cctctcagccatgtgtttctgtaggaagagttgtcgcggagagaagcatcgtgtggcttg 696

                   
Query: 223 tactccat 230
           || |||||
Sbjct: 695 tattccat 688

>ref|NM_121815.2| Arabidopsis thaliana CSD3 (COPPER/ZINC SUPEROXIDE DISMUTASE 3);
           copper, zinc superoxide dismutase AT5G18100 (CSD3) mRNA,
           complete cds
          Length = 1011

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 163 cctctcagccatgtgttcctgtaggacgagttgtctcgcagcgaggcatcatgtggtttg 222
           ||||||||||||||||| |||||||| |||||||| || || || ||||| ||||| |||
Sbjct: 921 cctctcagccatgtgtttctgtaggaagagttgtcgcggagagaagcatcgtgtggcttg 980

                   
Query: 223 tactccat 230
           || |||||
Sbjct: 981 tattccat 988

>gb|AY114562.1| Arabidopsis thaliana eukaryotic cap-binding protein (At5g18110)
           mRNA, complete cds
          Length = 711

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 163 cctctcagccatgtgttcctgtaggacgagttgtctcgcagcgaggcatcatgtggtttg 222
           ||||||||||||||||| |||||||| |||||||| || || || ||||| ||||| |||
Sbjct: 662 cctctcagccatgtgtttctgtaggaagagttgtcgcggagagaagcatcgtgtggcttg 603

                   
Query: 223 tactccat 230
           || |||||
Sbjct: 602 tattccat 595

>gb|AY093208.1| Arabidopsis thaliana cap-binding protein (At5g18110) mRNA, complete
           cds
          Length = 1034

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 163 cctctcagccatgtgttcctgtaggacgagttgtctcgcagcgaggcatcatgtggtttg 222
           ||||||||||||||||| |||||||| |||||||| || || || ||||| ||||| |||
Sbjct: 751 cctctcagccatgtgtttctgtaggaagagttgtcgcggagagaagcatcgtgtggcttg 692

                   
Query: 223 tactccat 230
           || |||||
Sbjct: 691 tattccat 684

>gb|AY092964.1| Arabidopsis thaliana eukaryotic cap-binding protein (gb|AAC17220.1)
           (At5g18110) mRNA, complete cds
          Length = 1036

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 163 cctctcagccatgtgttcctgtaggacgagttgtctcgcagcgaggcatcatgtggtttg 222
           ||||||||||||||||| |||||||| |||||||| || || || ||||| ||||| |||
Sbjct: 755 cctctcagccatgtgtttctgtaggaagagttgtcgcggagagaagcatcgtgtggcttg 696

                   
Query: 223 tactccat 230
           || |||||
Sbjct: 695 tattccat 688

>gb|AF028809.1|AF028809 Arabidopsis thaliana novel cap-binding protein nCBP mRNA, complete
           cds
          Length = 1009

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 163 cctctcagccatgtgttcctgtaggacgagttgtctcgcagcgaggcatcatgtggtttg 222
           ||||||||||||||||| |||||||| |||||||| || || || ||||| ||||| |||
Sbjct: 745 cctctcagccatgtgtttctgtaggaagagttgtcgcggagagaagcatcgtgtggcttg 686

                   
Query: 223 tactccat 230
           || |||||
Sbjct: 685 tattccat 678

>emb|BX832048.1|CNS0A12P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH48ZG08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 989

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 163 cctctcagccatgtgttcctgtaggacgagttgtctcgcagcgaggcatcatgtggtttg 222
           ||||||||||||||||| |||||||| |||||||| || || || ||||| ||||| |||
Sbjct: 713 cctctcagccatgtgtttctgtaggaagagttgtcgcggagagaagcatcgtgtggcttg 654

                   
Query: 223 tactccat 230
           || |||||
Sbjct: 653 tattccat 646

>emb|BX831907.1|CNS0A178 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH38ZG08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 999

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 163 cctctcagccatgtgttcctgtaggacgagttgtctcgcagcgaggcatcatgtggtttg 222
           ||||||||||||||||| |||||||| |||||||| || || || ||||| ||||| |||
Sbjct: 715 cctctcagccatgtgtttctgtaggaagagttgtcgcggagagaagcatcgtgtggcttg 656

                   
Query: 223 tactccat 230
           || |||||
Sbjct: 655 tattccat 648

>emb|BX831776.1|CNS0A10R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH29ZC04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 955

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 163 cctctcagccatgtgttcctgtaggacgagttgtctcgcagcgaggcatcatgtggtttg 222
           ||||||||||||||||| |||||||| |||||||| || || || ||||| ||||| |||
Sbjct: 716 cctctcagccatgtgtttctgtaggaagagttgtcgcggagagaagcatcgtgtggcttg 657

                   
Query: 223 tactccat 230
           || |||||
Sbjct: 656 tattccat 649

>emb|BX833226.1|CNS0A0B0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL3ZC04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 962

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 163 cctctcagccatgtgttcctgtaggacgagttgtctcgcagcgaggcatcatgtggtttg 222
           ||||||||||||||||| |||||||| |||||||| || || || ||||| ||||| |||
Sbjct: 722 cctctcagccatgtgtttctgtaggaagagttgtcgcggagagaagcatcgtgtggcttg 663

                   
Query: 223 tactccat 230
           || |||||
Sbjct: 662 tattccat 655

>dbj|AB012246.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRG7
          Length = 83948

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                         
Query: 163   cctctcagccatgtgttcctgtaggacgagttgtctcgcagcgaggcatcatgtggtttg 222
             ||||||||||||||||| |||||||| |||||||| || || || ||||| ||||| |||
Sbjct: 12615 cctctcagccatgtgtttctgtaggaagagttgtcgcggagagaagcatcgtgtggcttg 12674

                     
Query: 223   tactccat 230
             || |||||
Sbjct: 12675 tattccat 12682

>emb|AL441927.10| Human DNA sequence from clone RP1-294P19 on chromosome 6, complete
             sequence
          Length = 67605

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   aatccacaaggattaagttc 121
             ||||||||||||||||||||
Sbjct: 63602 aatccacaaggattaagttc 63621

>emb|AL035466.3|HS260B21 Human DNA sequence from clone RP1-260B21 on chromosome 6q14.1-14.3,
             complete sequence
          Length = 89089

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    atttgaaattctgtaaagta 41
             ||||||||||||||||||||
Sbjct: 78203 atttgaaattctgtaaagta 78222

>gb|AC182435.3| Mus musculus chromosome 8, clone wi1-1119F24, complete sequence
          Length = 37516

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   agggccatgactagccttga 147
             ||||||||||||||||||||
Sbjct: 16077 agggccatgactagccttga 16058

>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 199    cgcagcgaggcatcatgtgg 218
              ||||||||||||||||||||
Sbjct: 340231 cgcagcgaggcatcatgtgg 340250

>gb|AC093852.3| Homo sapiens BAC clone RP11-500G9 from 4, complete sequence
          Length = 158901

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    gactagccttgacaacatgg 155
              ||||||||||||||||||||
Sbjct: 154662 gactagccttgacaacatgg 154681

>gb|AC172623.3| Mus musculus chromosome 8, clone RP23-478A9, complete sequence
          Length = 182316

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 128  agggccatgactagccttga 147
            ||||||||||||||||||||
Sbjct: 9698 agggccatgactagccttga 9717

>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      gtcaatacttaggcatttga 27
              ||||||||||||||||||||
Sbjct: 511558 gtcaatacttaggcatttga 511577

>gb|AC006744.1| Caenorhabditis elegans cosmid Y38C9B, complete sequence
          Length = 19368

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 21   catttgaaattctgtaaagtacat 44
            ||||||||||||| ||||||||||
Sbjct: 6508 catttgaaattctataaagtacat 6485


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,154,069
Number of Sequences: 3902068
Number of extensions: 2154069
Number of successful extensions: 36184
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36130
Number of HSP's gapped (non-prelim): 54
length of query: 254
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 232
effective length of database: 17,147,199,772
effective search space: 3978150347104
effective search space used: 3978150347104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)