>U202B_ARATH (Q9M2Q4) Hypothetical UPF0202 protein At3g57940|
          Length = 1024

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 18/38 (47%), Positives = 27/38 (71%), Gaps = 7/38 (18%)
 Frame = -2

Query: 404  KALQNEKLSASGVISVKSSKT-------SADKKRSTGK 312
            +ALQ+ K+S+SG+ISVKS+K+        + KKRS+ K
Sbjct: 968  EALQHSKISSSGIISVKSTKSENENGFDKSTKKRSSDK 1005

>MEC10_CAEEL (P34886) Degenerin mec-10 (Mechanosensory abnormality protein 10)|
          Length = 724

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
 Frame = -1

Query: 267 EKKKNRT*SCHLELRWSDPGILKSPEKPLQGLSSRRGKREAEVAKQAIICRISLTNLSKT 88
           +++ N    CH + +W++       E  L    +++G + +E+ K+  IC       SK 
Sbjct: 276 DRQTNDAWPCHRKEQWTNTTCQTCDEHYLCSKKAKKGTKRSELKKEPCICE------SKG 329

Query: 87  LW---HHHASILL 58
           L+   H HA+++L
Sbjct: 330 LFCIKHEHAAMVL 342

>YCE1_YEAST (P25571) Hypothetical 19.1 kDa protein in PDI1-GLK1 intergenic|
           region
          Length = 164

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 267 PIYHHYLVLSFSIFCFPCASLLVSTCFAG 353
           P  H Y+ +   IFC+ C  LL + C  G
Sbjct: 90  PYGHTYIYIYIYIFCYACIFLLQAACLIG 118

>STP3_SHEEP (O97965) Spermatid nuclear transition protein 3 (STP-3) (TP-3)|
           (TP3) (Spermatidal protein 3)
          Length = 109

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
 Frame = -3

Query: 481 ESRMKQLWTQSYCRSARLKEMTLRLRKLCRMRNCLQAAL-SV*NPAKQVLTRREAQ---- 317
           + R K LW + Y  S +   MT+R+R+   ++  L+  + S   P+K+V   RE      
Sbjct: 22  KGRKKTLWQRRYRGSVKAPNMTMRVRR--PLKGTLRKKIRSYATPSKKVKNTREPNCFLR 79

Query: 316 --GKQKIEKERTR 284
              ++K+ + R R
Sbjct: 80  SCAREKLNQSRKR 92

>PRIA_BUCAP (Q8KA15) Primosomal protein N' (EC 3.6.1.-) (ATP-dependent helicase|
           priA) (Replication factor Y)
          Length = 720

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +1

Query: 379 DNFSFCRAFSISRSSPLIAHFCNNF 453
           DNF FCR   I    PL  + C NF
Sbjct: 447 DNFLFCRNCLIKIKKPLFCYNCKNF 471


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,341,340
Number of Sequences: 219361
Number of extensions: 1127079
Number of successful extensions: 4174
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4173
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)