Clone Name | rbastl31a02 |
---|---|
Clone Library Name | barley_pub |
>SPS1_CITUN (O22060) Sucrose-phosphate synthase 1 (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase 1) Length = 1057 Score = 68.6 bits (166), Expect = 7e-12 Identities = 31/62 (50%), Positives = 47/62 (75%), Gaps = 1/62 (1%) Frame = -3 Query: 439 LLGGLHRTIILKGDFNIAANRIHTVRRYPLQDVVALDSSNIIEV-QGCTTEDIKSALRHI 263 LLGG+H+T+ILKG + ++N+IH R YPL DV+ +DS NI++ + CTT DI+S+L + Sbjct: 993 LLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 1052 Query: 262 GV 257 G+ Sbjct: 1053 GL 1054
>SPS_BETVU (P49031) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1045 Score = 59.3 bits (142), Expect = 4e-09 Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%) Frame = -3 Query: 439 LLGGLHRTIILKGDFNIAANRIHTVRRYPLQDVVALDSSNIIEV-QGCTTEDIKS 278 LLGG+H+T+ILKG N A +H R YPL VV+LDS NI EV +GC++ +I+S Sbjct: 983 LLGGVHKTVILKGVSNTALRSLHANRSYPLSHVVSLDSPNIGEVSKGCSSSEIQS 1037
>SPS_VICFA (Q43876) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1059 Score = 57.8 bits (138), Expect = 1e-08 Identities = 27/61 (44%), Positives = 44/61 (72%), Gaps = 1/61 (1%) Frame = -3 Query: 439 LLGGLHRTIILKGDFNIAANRIHTVRRYPLQDVVALDSSNIIE-VQGCTTEDIKSALRHI 263 L+GGLH+++ILKG + A +++H R YPL DV+ LDS NI++ +G ++ DI++ L + Sbjct: 995 LVGGLHKSVILKGVGSRAISQLHNNRNYPLSDVMPLDSPNIVQATEGSSSADIQALLEKV 1054 Query: 262 G 260 G Sbjct: 1055 G 1055
>SPS_SPIOL (P31928) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1056 Score = 57.4 bits (137), Expect = 2e-08 Identities = 27/60 (45%), Positives = 39/60 (65%) Frame = -3 Query: 439 LLGGLHRTIILKGDFNIAANRIHTVRRYPLQDVVALDSSNIIEVQGCTTEDIKSALRHIG 260 LLGG+H+T+ILKG + +N H R YP++ V+ +DS N+ + GC +DI AL IG Sbjct: 990 LLGGVHKTVILKGIGSNTSN-FHATRAYPMEHVMPVDSPNMFQTGGCNIDDISDALSKIG 1048
>SPS1_CRAPL (O04932) Sucrose-phosphate synthase 1 (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase 1) Length = 1054 Score = 52.0 bits (123), Expect = 7e-07 Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 2/62 (3%) Frame = -3 Query: 439 LLGGLHRTIILKGDFNIAANRIHTVRRYPLQDVVALDSSNIIEV--QGCTTEDIKSALRH 266 +LGG+H+T++L G A N +H R YPL DVV D NI + + C++ D+++ L Sbjct: 989 MLGGVHKTVVLSGVCTTATNLLHANRSYPLADVVCFDDLNIFKTHNEECSSTDLRALLEE 1048 Query: 265 IG 260 G Sbjct: 1049 HG 1050
>SPS_SOLTU (Q43845) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1053 Score = 49.3 bits (116), Expect = 4e-06 Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Frame = -3 Query: 439 LLGGLHRTIILKGDFNIAANRIHTVRRYPLQDVVALDSSNIIEV-QGCTTEDIKSALRHI 263 L+GGL + +I+KG A++ IH R YPL DV+ DS N+I+ + C++ +I+ L + Sbjct: 989 LIGGLRKAVIMKGLCTNASSLIHGNRNYPLSDVLPFDSPNVIQADEECSSTEIRCLLEKL 1048 Query: 262 GV 257 V Sbjct: 1049 AV 1050
>NS1_IADE1 (P08272) Nonstructural protein 1 (NS1) (NS1A) (Fragment)| Length = 227 Score = 32.3 bits (72), Expect = 0.54 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 3/55 (5%) Frame = -3 Query: 427 LHRTIILKGDFNIAANRIHT---VRRYPLQDVVALDSSNIIEVQGCTTEDIKSAL 272 + + IILK +F++ NR+ T +R + + + + S + + G T ED+K+A+ Sbjct: 121 MDKNIILKANFSVICNRLETLILLRTFTEEGAIVGEISPLPSLPGHTDEDVKNAI 175
>POLG_POL32 (P06209) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2205 Score = 31.6 bits (70), Expect = 0.91 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 20/98 (20%) Frame = +2 Query: 8 DFSAHICFPTTFIILSTSKFVNSTN--------------------KRWKLFTARGYTTPT 127 +F + F F + T+ F NS N K W +T + + P+ Sbjct: 698 EFFTYSRFDMEFTFVVTANFTNSNNGHALNQVYQIMYIPPGAPTPKSWDDYTWQTSSNPS 757 Query: 128 LYNLQTKSAFPSSMEIVALGLARTSSHFLLPFCGAPAK 241 ++ T A P+ + + +GLA SHF F P K Sbjct: 758 IF--YTYGAAPARISVPYVGLANAYSHFYDGFAKVPLK 793
>REM1_MOUSE (O35929) GTP-binding protein REM 1 (Rad and Gem-like GTP-binding| protein 1) Length = 297 Score = 31.6 bits (70), Expect = 0.91 Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 1/103 (0%) Frame = +2 Query: 128 LYNLQTKSAFPSSMEI-VALGLARTSSHFLLPFCGAPAKMLLCRHTNVTQGRLDVLCSAT 304 +Y++ +S+F S+ E+ + L ++H + G A + CR +V +GR C+ Sbjct: 159 VYSIADRSSFESASELRIQLRRTHQANHVPIILVGNKADLARCREVSVEEGR---ACAVV 215 Query: 305 LDFNDIGAVQCNDILQGVSPHCVDSVCGNVEVTLQDYGPVETP 433 D ++ + LQ + V + + QD ETP Sbjct: 216 FDCK---FIETSATLQHNVTELFEGVVRQLRLRRQDNAAPETP 255
>POLG_POL3L (P03302) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2205 Score = 30.4 bits (67), Expect = 2.0 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 20/98 (20%) Frame = +2 Query: 8 DFSAHICFPTTFIILSTSKFVNSTN--------------------KRWKLFTARGYTTPT 127 +F + F F + T+ F N+ N K W +T + + P+ Sbjct: 698 EFFTYSRFDMEFTFVVTANFTNANNGHALNQVYQIMYIPPGAPTPKSWDDYTWQTSSNPS 757 Query: 128 LYNLQTKSAFPSSMEIVALGLARTSSHFLLPFCGAPAK 241 ++ T A P+ + + +GLA SHF F P K Sbjct: 758 IF--YTYGAAPARISVPYVGLANAYSHFYDGFAKVPLK 793
>NS1_IADU3 (P08270) Nonstructural protein 1 (NS1) (NS1A) (Fragment)| Length = 227 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Frame = -3 Query: 427 LHRTIILKGDFNIAANRIHT---VRRYPLQDVVALDSSNIIEVQGCTTEDIKSAL 272 + + IILK +F++ NR+ T +R + + + S + + G T ED+K+A+ Sbjct: 121 MDKDIILKANFSVIFNRLETLILLRAFTEDGAIVGEISPLPSLPGHTDEDVKNAI 175
>RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2| Length = 1516 Score = 30.0 bits (66), Expect = 2.7 Identities = 16/31 (51%), Positives = 18/31 (58%) Frame = -2 Query: 419 DHNPEG*LQHCRKQNPHSEEIPLAGCRCTGQ 327 D +P Q C Q PHS E+P AG R TGQ Sbjct: 612 DPSPPWSTQVC--QGPHSSEMPPAGLRATGQ 640
>POLG_PVYYO (P11897) Genome polyprotein [Contains: Nuclear inclusion protein B| (NI-B) (NIB) (RNA-directed RNA polymerase) (EC 2.7.7.48); Coat protein (CP)] (Fragment) Length = 284 Score = 30.0 bits (66), Expect = 2.7 Identities = 21/93 (22%), Positives = 40/93 (43%) Frame = +2 Query: 101 TARGYTTPTLYNLQTKSAFPSSMEIVALGLARTSSHFLLPFCGAPAKMLLCRHTNVTQGR 280 T+ +T P + + +K P S + AL L + AP ++ + +T TQ + Sbjct: 55 TSGTHTVPRIKAITSKMRMPRSKGVAALNLEHLLEY-------APQQIDIS-NTRATQSQ 106 Query: 281 LDVLCSATLDFNDIGAVQCNDILQGVSPHCVDS 379 D A DIG + ++ G+ C+++ Sbjct: 107 FDTWYEAVRMAYDIGQTEMPTVMNGLMVWCIEN 139
>ACA13_ARATH (Q9LIK7) Putative calcium-transporting ATPase 13, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 13) Length = 1017 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 5/54 (9%) Frame = +2 Query: 44 IILSTSKFVNSTNKRWKLFTARGYTTPTLYN-----LQTKSAFPSSMEIVALGL 190 ++L K ++ +NK+W+L + Y + TL N ++ FP S+ A+ L Sbjct: 19 VLLELPKTLSKSNKKWQLALIKLYCSRTLLNCAKHAIRKPGLFPRSLSYTAIDL 72
>SYPM_HUMAN (Q7L3T8) Probable prolyl-tRNA synthetase, mitochondrial precursor| (EC 6.1.1.15) (Proline--tRNA ligase) (ProRS) Length = 475 Score = 29.3 bits (64), Expect = 4.5 Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 9/79 (11%) Frame = -1 Query: 231 APQKGRRK*-----EEVRAKPSATISILDGNADFVCR----L*SVGVVYPRAVNNFHLLF 79 AP++GRR + + +S+ D + D C+ + VG++YP + +HLL Sbjct: 33 APRRGRRLLLSRVFQPQNLREDRVLSLQDKSDDLTCKSQRLMLQVGLIYPASPGCYHLL- 91 Query: 78 VLFTNFEVDNMINVVGKQM 22 +T ++ ++ V+ ++M Sbjct: 92 -PYTVRAMEKLVRVIDQEM 109
>YQY1_CAEEL (Q09560) Hypothetical protein F36G3.1| Length = 964 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Frame = +2 Query: 293 CSATLDFNDIGAVQCNDILQ----GVSPHCVDSVCGNVEVTLQDYGPVETP 433 CS+ +F D+ VQ D+ Q GVS ++ GN +V + + +TP Sbjct: 109 CSSEEEFYDVDDVQIRDVAQQLLNGVSDDKTETEAGNNDVIIAEEDRADTP 159
>YOP1_DEBHA (Q6BWH8) Protein YOP1| Length = 177 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = +3 Query: 285 MSSVVQPWTSMILELSSATTSCKGYLLTVWILFAAMLKSPFRIMVLW 425 ++ +V P +L L S TTS LLT W++FA F ++ W Sbjct: 64 IAGLVIPGYFSLLALESTTTSDDTQLLTYWVVFAT-----FNVVEFW 105
>ZBTB1_MOUSE (Q91VL9) Zinc finger and BTB domain-containing protein 1| Length = 713 Score = 29.3 bits (64), Expect = 4.5 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -2 Query: 272 ASHWCADTITSLRVPHKREEENE 204 A+ WCA+ +++ PH RE E E Sbjct: 156 ANRWCAEPSSTVNTPHHREPEEE 178
>SELD_DESVH (Q72CF1) Selenide, water dikinase (EC 2.7.9.3) (Selenophosphate| synthetase) (Selenium donor protein) Length = 351 Score = 28.9 bits (63), Expect = 5.9 Identities = 20/84 (23%), Positives = 32/84 (38%) Frame = +2 Query: 134 NLQTKSAFPSSMEIVALGLARTSSHFLLPFCGAPAKMLLCRHTNVTQGRLDVLCSATLDF 313 ++ T P+ +++VA GL SH FC + H V +D++ A Sbjct: 251 DVSTLPLMPAVLDLVATGLLPAGSHANRHFCSGNVSV----HPEVDSLLVDIVFDAQTS- 305 Query: 314 NDIGAVQCNDILQGVSPHCVDSVC 385 ++ V PH VD C Sbjct: 306 --------GGLILAVPPHLVDDAC 321
>NS1_IAHO3 (O56264) Nonstructural protein 1 (NS1) (NS1A)| Length = 230 Score = 28.9 bits (63), Expect = 5.9 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Frame = -3 Query: 427 LHRTIILKGDFNIAANRIHT---VRRYPLQDVVALDSSNIIEVQGCTTEDIKSAL 272 + + IILK +F++ NR+ +R + + + + S + + G T ED+K+A+ Sbjct: 124 MDKDIILKANFSVIFNRLEALILLRAFTDEGAIVGEISPLPSLPGHTEEDVKNAI 178
>TRM1_METAC (Q8TGX6) N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC| 2.1.1.32) (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA 2,2-dimethylguanosine-26 methyltransferase) (tRNA(m(2,2)G26)dimethyltransferase) Length = 388 Score = 28.5 bits (62), Expect = 7.7 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%) Frame = +1 Query: 286 CPL*CNPGLQ*YWSCPV--QRHPARGISSLCGFCLRQC*SHPSGL 414 C N G++ Y + P+ + H G+ L G C R+C H G+ Sbjct: 169 CGAHLNSGIRKYAAVPLNTEYHSEMGLRVLLGACARECAKHEKGM 213
>R1AB_CVBQ (Q8V6W7) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p28; p65; p210 (EC 3.4.22.-) (Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2 (p44); 3C-like proteinase ( Length = 7059 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -3 Query: 430 GLHRTIILKGDFNIAANRIHTVRRYPLQDVVALDSSNIIEVQGCTT 293 GL T ILK D N + ++ +QDV L + V+GC T Sbjct: 4170 GLKYTKILKDDGNFVVLELDPPCKFTVQDVKGLKIKYLYFVKGCNT 4215
>R1AB_CVBM (Q66198) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p28; p65; p210 (EC 3.4.22.-) (Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2 (p44); 3C-like proteinase ( Length = 7094 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -3 Query: 430 GLHRTIILKGDFNIAANRIHTVRRYPLQDVVALDSSNIIEVQGCTT 293 GL T ILK D N + ++ +QDV L + V+GC T Sbjct: 4170 GLKYTKILKDDGNFVVLELDPPCKFTVQDVKGLKIKYLYFVKGCNT 4215
>R1AB_CVBLU (Q8V439) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p28; p65; p210 (EC 3.4.22.-) (Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2 (p44); 3C-like proteinase Length = 7094 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -3 Query: 430 GLHRTIILKGDFNIAANRIHTVRRYPLQDVVALDSSNIIEVQGCTT 293 GL T ILK D N + ++ +QDV L + V+GC T Sbjct: 4170 GLKYTKILKDDGNFVVLELDPPCKFTVQDVKGLKIKYLYFVKGCNT 4215
>R1AB_CVBEN (Q91A29) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p28; p65; p210 (EC 3.4.22.-) (Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2 (p44); 3C-like proteinase Length = 7094 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -3 Query: 430 GLHRTIILKGDFNIAANRIHTVRRYPLQDVVALDSSNIIEVQGCTT 293 GL T ILK D N + ++ +QDV L + V+GC T Sbjct: 4170 GLKYTKILKDDGNFVVLELDPPCKFTVQDVKGLKIKYLYFVKGCNT 4215
>ZBTB1_HUMAN (Q9Y2K1) Zinc finger and BTB domain-containing protein 1| Length = 713 Score = 28.5 bits (62), Expect = 7.7 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = -2 Query: 272 ASHWCADTITSLRVPHKREEENE 204 A+ WCA+ +++ PH RE + E Sbjct: 156 ANRWCAEPSSTVNTPHNREADEE 178
>WNK1_HUMAN (Q9H4A3) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Protein| kinase with no lysine 1) (Protein kinase, lysine-deficient 1) (Kinase deficient protein) Length = 2382 Score = 28.5 bits (62), Expect = 7.7 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%) Frame = +2 Query: 104 ARGYTT--PTLYNLQTKSAFPSSMEIVALGLARTSSHFLLPFCGAPAKMLLCRHTNVTQG 277 A G TT TL ++ T ++FPS+ +++ L+ ++S L + L + ++ + Sbjct: 1479 AAGSTTVGATLTSVSTTTSFPSTASQLSIQLSSSTSTPTLAETVVVSAHSLDKTSHSSTT 1538 Query: 278 RLDVLCSATLDFNDIGAVQCNDILQ--GVSPHCVDSVCGNVEVTLQDYGPVETP 433 L SA + GA + I Q G+ P + SV + + Q GP TP Sbjct: 1539 GLAFSLSAPSSSSSPGAGVSSYISQPGGLHPLVIPSVIASTPILPQAAGPTSTP 1592
>ZDH11_HUMAN (Q9H8X9) Probable palmitoyltransferase ZDHHC11 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 11) (DHHC-11) (Zinc finger protein 399) Length = 412 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/39 (28%), Positives = 18/39 (46%) Frame = +2 Query: 254 RHTNVTQGRLDVLCSATLDFNDIGAVQCNDILQGVSPHC 370 +H +V Q + LC T++ + CN + G HC Sbjct: 117 KHAHVIQNQFCHLCKVTVNKKTKHCISCNKCVSGFDHHC 155 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,294,262 Number of Sequences: 219361 Number of extensions: 1555739 Number of successful extensions: 4049 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 3935 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4047 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)