Clone Name | rbastl30h06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MYSP2_DROME (P35416) Paramyosin, short form (Miniparamyosin) | 30 | 3.2 | 2 | YAW5_SCHPO (Q10180) Hypothetical protein C3F10.05c in chromosome I | 28 | 7.1 |
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>MYSP2_DROME (P35416) Paramyosin, short form (Miniparamyosin)| Length = 640 Score = 29.6 bits (65), Expect = 3.2 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = +3 Query: 300 KTTGLAVRGSHVPRVRAASLLLLQEQPALREFAADEMVQL 419 K GL V+ H+P V L + A+R++ ADE+V+L Sbjct: 40 KAKGLEVKKPHLPWVSERGLKQYRPSNAVRQYNADEIVRL 79
>YAW5_SCHPO (Q10180) Hypothetical protein C3F10.05c in chromosome I| Length = 326 Score = 28.5 bits (62), Expect = 7.1 Identities = 9/33 (27%), Positives = 19/33 (57%) Frame = -1 Query: 151 EQCKPVLLTNECHSMDYHCPAFLLIFLWPSEEN 53 E+CK +L + C+ Y CP ++ ++ + + N Sbjct: 181 ERCKLLLQSELCNQDSYDCPGYICVYRFEQKNN 213 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,769,719 Number of Sequences: 219361 Number of extensions: 885629 Number of successful extensions: 1528 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1512 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1528 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)