Clone Name | rbastl30g12 |
---|---|
Clone Library Name | barley_pub |
>gb|AC093244.2| Homo sapiens chromosome 5 clone RP11-113I22, complete sequence Length = 85927 Score = 42.1 bits (21), Expect = 0.87 Identities = 24/25 (96%) Strand = Plus / Minus Query: 128 aacaaaaagaaccaccaggcaacat 152 ||||||||||||||||||| ||||| Sbjct: 64062 aacaaaaagaaccaccagggaacat 64038
>gb|AC091819.3| Homo sapiens chromosome 5 clone CTC-264O10, complete sequence Length = 118603 Score = 42.1 bits (21), Expect = 0.87 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttgagattaataactgtttta 81 ||||||||||||||||||||| Sbjct: 40202 ttgagattaataactgtttta 40222
>gb|AC011395.5| Homo sapiens chromosome 5 clone CTB-187I2, complete sequence Length = 96489 Score = 42.1 bits (21), Expect = 0.87 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttgagattaataactgtttta 81 ||||||||||||||||||||| Sbjct: 38118 ttgagattaataactgtttta 38098
>gb|AC115004.14| Mus musculus chromosome 3, clone RP24-182K13, complete sequence Length = 141316 Score = 42.1 bits (21), Expect = 0.87 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gtttgagattaataactgttt 79 ||||||||||||||||||||| Sbjct: 104503 gtttgagattaataactgttt 104523
>emb|AL365475.1|CNS05TF6 Human chromosome 14 DNA sequence BAC R-452D12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 187947 Score = 42.1 bits (21), Expect = 0.87 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 ctgttgctgccaagcaacaaa 209 ||||||||||||||||||||| Sbjct: 23296 ctgttgctgccaagcaacaaa 23276
>emb|AL355833.4|CNS05TCS Human chromosome 14 DNA sequence BAC R-262M8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 197817 Score = 42.1 bits (21), Expect = 0.87 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 ctgttgctgccaagcaacaaa 209 ||||||||||||||||||||| Sbjct: 79825 ctgttgctgccaagcaacaaa 79805
>ref|XM_955361.1| Neurospora crassa OR74A hypothetical protein (NCU05492.1) partial mRNA Length = 1677 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 catattcaagatcggtttcg 169 |||||||||||||||||||| Sbjct: 133 catattcaagatcggtttcg 114
>ref|XM_325346.1| Neurospora crassa OR74A hypothetical protein (NCU05492.1) partial mRNA Length = 1677 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 catattcaagatcggtttcg 169 |||||||||||||||||||| Sbjct: 133 catattcaagatcggtttcg 114
>gb|AC105459.1| Homo sapiens BAC clone RP11-115D14 from 7, complete sequence Length = 146098 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aaagtttgagattaataact 75 |||||||||||||||||||| Sbjct: 41703 aaagtttgagattaataact 41684
>emb|CT025840.2| Medicago truncatula chromosome 5 clone mth4-39c23, COMPLETE SEQUENCE Length = 243542 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ttcatggttcacaaaagttt 62 |||||||||||||||||||| Sbjct: 21528 ttcatggttcacaaaagttt 21547
>emb|Z70686.1|CER10H10 Caenorhabditis elegans Cosmid R10H10, complete sequence Length = 35056 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 gttttatgccaaaaattgtt 95 |||||||||||||||||||| Sbjct: 7906 gttttatgccaaaaattgtt 7925
>emb|BX649493.8| Zebrafish DNA sequence from clone CH211-226H23 in linkage group 2, complete sequence Length = 175551 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 agcctaattgtaactggggt 238 |||||||||||||||||||| Sbjct: 26346 agcctaattgtaactggggt 26327
>emb|BX510648.5| Zebrafish DNA sequence from clone CH211-155O9 in linkage group 5, complete sequence Length = 191453 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 aaaagtttgagattaataac 74 |||||||||||||||||||| Sbjct: 6005 aaaagtttgagattaataac 5986
>emb|BX294181.5| Zebrafish DNA sequence from clone CH211-284E13 in linkage group 5, complete sequence Length = 171388 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 aaaagtttgagattaataac 74 |||||||||||||||||||| Sbjct: 9151 aaaagtttgagattaataac 9170
>gb|U20142.1|CEU20142 Caenorhabditis elegans SPE-26 protein (spe-26) gene, complete cds Length = 3987 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gttttatgccaaaaattgtt 95 |||||||||||||||||||| Sbjct: 3211 gttttatgccaaaaattgtt 3192 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,732,931 Number of Sequences: 3902068 Number of extensions: 2732931 Number of successful extensions: 50688 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 50659 Number of HSP's gapped (non-prelim): 29 length of query: 264 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 242 effective length of database: 17,147,199,772 effective search space: 4149622344824 effective search space used: 4149622344824 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)