Clone Name | rbastl30g10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | FUCTC_DROME (P83088) Alpha-(1,3)-fucosyltransferase C (EC 2.4.1.... | 28 | 4.6 | 2 | NUOL_STRCO (Q9XAR5) NADH-quinone oxidoreductase chain L (EC 1.6.... | 28 | 4.6 | 3 | MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domai... | 28 | 7.8 |
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>FUCTC_DROME (P83088) Alpha-(1,3)-fucosyltransferase C (EC 2.4.1.-) (Galactoside| 3-L-fucosyltransferase) Length = 425 Score = 28.5 bits (62), Expect = 4.6 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = -2 Query: 237 DTTGSCNRCSCAMFSSSSHCLGVLDPEYFVYI 142 D G+C SC HC +LD +YF Y+ Sbjct: 272 DIYGNCGTLSCTR--GDPHCAEMLDTDYFFYL 301
>NUOL_STRCO (Q9XAR5) NADH-quinone oxidoreductase chain L (EC 1.6.99.5) (NADH| dehydrogenase I, chain L) (NDH-1, chain L) Length = 654 Score = 28.5 bits (62), Expect = 4.6 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = -3 Query: 251 HGRSQILLGAVTDAAVPCSVVQVTV 177 HG S I GAVT A V C V+ V V Sbjct: 523 HGDSPISAGAVTGATVACMVIGVAV 547
>MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domains 9 precursor| (EGF-like domain-containing protein 5) (Multiple EGF-like domain protein 5) Length = 600 Score = 27.7 bits (60), Expect = 7.8 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 3/30 (10%) Frame = -2 Query: 240 PDTTGSCNRCSCAMFSSSSHCL---GVLDP 160 PD C+RC C+ +S+ +C G L+P Sbjct: 338 PDAAKQCHRCPCSAVTSTGNCTIESGELEP 367 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,050,124 Number of Sequences: 219361 Number of extensions: 672832 Number of successful extensions: 1669 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1649 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1669 length of database: 80,573,946 effective HSP length: 73 effective length of database: 64,560,593 effective search space used: 1549454232 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)