ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl30g07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC... 42 6e-04
2EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase E... 39 0.005
3BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated rec... 36 0.031
4TMKL1_ARATH (P33543) Putative kinase-like protein TMKL1 precursor 32 0.59
5DYNA_CHICK (P35458) Dynactin-1 (150 kDa dynein-associated polype... 32 0.59
6Y890_MYCTU (Q10550) Putative HTH-type transcriptional regulator ... 30 2.3
7PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (... 30 2.3
8PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11... 30 2.3
9MECT1_MOUSE (Q68ED7) Mucoepidermoid carcinoma translocated prote... 30 2.9
10KIN31_CAEEL (P34265) Probable tyrosine-protein kinase kin-31 (EC... 29 3.8
11TRK1_LYMST (O76997) Putative neurotrophin receptor LTRK 1 precur... 29 5.0
12Y914_MYCBO (P59969) Putative HTH-type transcriptional regulator ... 28 6.6
13NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK ... 28 6.6
14MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2) 28 6.6
15MALZ_ECOLI (P21517) Maltodextrin glucosidase (EC 3.2.1.20) (Alph... 28 6.6
16WBS14_HUMAN (Q9NP71) Williams-Beuren syndrome chromosome region ... 28 8.6
17SYA_METMA (Q8PWU0) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 28 8.6
18YWJF_BACSU (P45866) Hypothetical protein ywjF 28 8.6
19CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (... 28 8.6
20ECLC_BOVIN (P54281) Epithelial chloride channel protein (Calcium... 28 8.6
21IFNA_MELGA (P51527) Interferon precursor (TkIFN) 28 8.6
22LAS17_YEAST (Q12446) Proline-rich protein LAS17 28 8.6

>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)|
          Length = 999

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 19/34 (55%), Positives = 26/34 (76%)
 Frame = -3

Query: 309  REEMALVLRVALLCTSRCPQDRPSMRDVLSMLQE 208
            +EE++ V+ + LLCTS  P +RPSMR V+ MLQE
Sbjct: 933  KEEISKVIHIGLLCTSPLPLNRPSMRKVVIMLQE 966



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>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
            (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
            MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 24/68 (35%), Positives = 37/68 (54%)
 Frame = -3

Query: 411  EGSNIVDWVRCKVAGGGGGLRDVMEHVGGSSEAAREEMALVLRVALLCTSRCPQDRPSMR 232
            EG N+V W   K+    G   DV++ +  S      ++ L L++A+LC +  P  RP+M 
Sbjct: 1127 EGGNLVGWAIQKI--NQGKAVDVIDPLLVSVALKNSQLRL-LQIAMLCLAETPAKRPNML 1183

Query: 231  DVLSMLQE 208
            DVL  L+E
Sbjct: 1184 DVLKALKE 1191



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>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score = 36.2 bits (82), Expect = 0.031
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = -3

Query: 306 EEMALVLRVALLCTSRCPQDRPSMRDVLSMLQ 211
           EE+  +++VALLCT   P +RP M +V+ ML+
Sbjct: 533 EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 564



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>TMKL1_ARATH (P33543) Putative kinase-like protein TMKL1 precursor|
          Length = 674

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -3

Query: 342 MEHVGGSSEAAREEMALVLRVALLCTSRCPQDRPSMRDVLSMLQEARPR 196
           +E + G      E +   L++A+ C +     RPSM +V+  L+E RPR
Sbjct: 607 LEAMKGIRSPMEEGLVHALKLAMGCCAPVTTVRPSMEEVVKQLEENRPR 655



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>DYNA_CHICK (P35458) Dynactin-1 (150 kDa dynein-associated polypeptide)|
           (DP-150) (DAP-150) (p150-glued)
          Length = 1224

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 21/67 (31%), Positives = 33/67 (49%)
 Frame = +2

Query: 47  VSTNA*MQPVKSSLRVQIVGAHKTHMTCVSFVG*LRGTPYTCFAAGFWLGLGLASCSMDS 226
           +ST A  +P+K   RV+++G  K H   V++VG       T  A G W+G+ L      +
Sbjct: 19  MSTEASSKPLKVGSRVEVIG--KGHRGTVAYVG------ATLXATGKWVGVILDEAKGKN 70

Query: 227 TSLIDGR 247
              + GR
Sbjct: 71  DGTVQGR 77



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>Y890_MYCTU (Q10550) Putative HTH-type transcriptional regulator Rv0890c/MT0914|
          Length = 882

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = -3

Query: 243 PSMRDVLSMLQEARPRPSQKPAAKHVYGVPRS*PTKLTHVMCVLCAPT 100
           P+ RDV+ ++ E     S K  AK ++  PR+  T LTHV   L  P+
Sbjct: 823 PTERDVVRLVSEGL---SNKDIAKRLFVSPRTVQTHLTHVYAKLGLPS 867



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>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)|
            (Phytosulfokine LRR receptor kinase)
          Length = 1008

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -3

Query: 306  EEMALVLRVALLCTSRCPQDRPSMRDVLSMLQE 208
            +EM  VL +A LC S  P+ RP+ + ++S L +
Sbjct: 975  KEMFRVLEIACLCLSENPKQRPTTQQLVSWLDD 1007



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>PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11.1)|
            (Phytosulfokine LRR receptor kinase)
          Length = 1021

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -3

Query: 306  EEMALVLRVALLCTSRCPQDRPSMRDVLSMLQ 211
            EEM LVL +A  C    P+ RP+ + ++S L+
Sbjct: 984  EEMLLVLEIACRCLGENPKTRPTTQQLVSWLE 1015



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>MECT1_MOUSE (Q68ED7) Mucoepidermoid carcinoma translocated protein 1 homolog|
          Length = 630

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 326 PPTCSITSRKPPPPPATLHLTQSTMLLPS 412
           PP   ++ ++PPPP  ++ L Q   LLPS
Sbjct: 370 PPPPPVSQQQPPPPQVSVGLPQGGPLLPS 398



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>KIN31_CAEEL (P34265) Probable tyrosine-protein kinase kin-31 (EC 2.7.10.2)|
          Length = 437

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -3

Query: 315 AAREEMALVLRVALLCTSRCPQDRPSMRDVLSMLQE--ARPRPSQKPAAK 172
           AA E  AL+ R    C +  P DRP+M DV  +LQ    + RP+    AK
Sbjct: 347 AAPEVQALMTR----CCAENPNDRPTMSDVAQILQRVTGQGRPNFAAIAK 392



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>TRK1_LYMST (O76997) Putative neurotrophin receptor LTRK 1 precursor (EC|
           2.7.10.1)
          Length = 794

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = -3

Query: 348 DVMEHVGGSSEAAREEMAL---VLRVALLCTSRCPQDRPSMRDVLSMLQE 208
           +V+EH+  S    R        V RV   C    PQDR +M+D+  +L+E
Sbjct: 732 EVIEHIKNSRTLKRPPRTCTDGVYRVMQGCWKPNPQDRLTMKDIAELLRE 781



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>Y914_MYCBO (P59969) Putative HTH-type transcriptional regulator Mb0914c|
          Length = 882

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -3

Query: 243 PSMRDVLSMLQEARPRPSQKPAAKHVYGVPRS*PTKLTHVMCVL 112
           P+ RDV+ ++ E     S K  AK ++  PR+  T LTHV   L
Sbjct: 823 PTERDVVRLVSEGL---SNKDIAKRLFVSPRTVQTHLTHVYAKL 863



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>NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK (EC 2.7.11.1)|
          Length = 389

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 23/77 (29%), Positives = 35/77 (45%)
 Frame = -3

Query: 402 NIVDWVRCKVAGGGGGLRDVMEHVGGSSEAAREEMALVLRVALLCTSRCPQDRPSMRDVL 223
           N+VDW R  +      LR +   + G     R     VL  AL C S   + RP+M +++
Sbjct: 290 NLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVL--ALDCISIDAKSRPTMNEIV 347

Query: 222 SMLQEARPRPSQKPAAK 172
             ++E      QK A+K
Sbjct: 348 KTMEELH---IQKEASK 361



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>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 326  PPTCSITSRKPPPPPATLHLTQSTMLLPSP 415
            P T + T+ + P PP T  +T +T + P+P
Sbjct: 1882 PTTMTTTTTENPTPPTTTPITTTTTVTPTP 1911



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>MALZ_ECOLI (P21517) Maltodextrin glucosidase (EC 3.2.1.20) (Alpha-glucosidase)|
          Length = 605

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 369 GGGGGLRDVMEHVGGSSEAARE 304
           G  GG R+ M+HV G +EAA+E
Sbjct: 343 GEAGGARNNMQHVAGITEAAKE 364



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>WBS14_HUMAN (Q9NP71) Williams-Beuren syndrome chromosome region 14 protein (WS|
           basic-helix-loop-helix leucine zipper protein) (WS-bHLH)
           (Mlx interactor) (MLX-interacting protein-like)
          Length = 852

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +2

Query: 323 LPPTCSITSRKPPPPPATL 379
           LPPT + T  +PPP PATL
Sbjct: 569 LPPTPAPTPPRPPPGPATL 587



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>SYA_METMA (Q8PWU0) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
            (AlaRS)
          Length = 926

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -3

Query: 378  KVAGGGGGLRDVMEHVGGSSEAAREEMALVLRVALLCTSRCPQ 250
            K+ GGGGG +  +  +GG ++  R + AL   + L+ T+ C +
Sbjct: 884  KIVGGGGGGKPALA-MGGGTDPTRIQDALTRGLELVKTAACKE 925



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>YWJF_BACSU (P45866) Hypothetical protein ywjF|
          Length = 705

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 369 GGGGGLRDVMEHVGGSSEAAREEMALVLRVALLCTSRCP 253
           G GGGL  + E  G     AR E AL +  +++ +S CP
Sbjct: 625 GAGGGLMWMEEETGNRINVARTEQALAVNPSVI-SSGCP 662



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>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)|
          Length = 980

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 14/81 (17%)
 Frame = -3

Query: 414  GEGSNIVDWVRCKVAGGGGGLRDVMEHVGGSSEAA--------------REEMALVLRVA 277
            GEG +IV WVR           +  E +   S+AA                 +  V ++A
Sbjct: 898  GEGVDIVRWVR-----------NTEEEITQPSDAAIVVAIVDPRLTGYPLTSVIHVFKIA 946

Query: 276  LLCTSRCPQDRPSMRDVLSML 214
            ++C       RP+MR+V+ ML
Sbjct: 947  MMCVEEEAAARPTMREVVHML 967



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>ECLC_BOVIN (P54281) Epithelial chloride channel protein (Calcium-activated|
           chloride channel)
          Length = 903

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 320 LLPPTCSITSRKPPPPP--ATLHLTQSTMLLPSP 415
           +L  T +  +R P  PP  AT H++Q+T   PSP
Sbjct: 581 ILTVTVTTRARSPTTPPVTATAHMSQNTAHYPSP 614



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>IFNA_MELGA (P51527) Interferon precursor (TkIFN)|
          Length = 192

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -3

Query: 288 LRVALLCTSRCPQDRPSMRDVLSMLQEARPRPSQKPAAKH 169
           L  A  C    PQD    RD L +L++  P P Q P  +H
Sbjct: 25  LAAAAACNHLRPQDATFSRDSLQLLRDMAPSPPQ-PCPQH 63



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>LAS17_YEAST (Q12446) Proline-rich protein LAS17|
          Length = 633

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query: 323 LPPTC-SITSRKPPPPPATLHLTQSTMLLPSP 415
           +PPT  S TS  PPPPPA L     +   P+P
Sbjct: 491 IPPTLPSTTSAAPPPPPAFLTQQPQSGGAPAP 522


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,183,034
Number of Sequences: 219361
Number of extensions: 843997
Number of successful extensions: 4058
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3993
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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