ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl30g07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 159 bits (80), Expect = 9e-36 Identities = 104/112 (92%) Strand = Plus / Minus Query: 200 ggcctggcctcctgcagcatggacagcacgtccctcatcgacggccggtcctgcgggcac 259 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 2767953 ggcctggcctcctgcagcatggacagcacctccctcatcgacggccgctcctgcgggcac 2767894 Query: 260 cggctcgtgcacagcagcgccacccgcagcaccagcgccatttcctcccgcg 311 ||||| ||||||||||||||||||| ||| |||||||||| || ||||||| Sbjct: 2767893 cggctggtgcacagcagcgccaccctaagcgccagcgccatctcgtcccgcg 2767842
>dbj|AP005740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015A04 Length = 152058 Score = 159 bits (80), Expect = 9e-36 Identities = 104/112 (92%) Strand = Plus / Minus Query: 200 ggcctggcctcctgcagcatggacagcacgtccctcatcgacggccggtcctgcgggcac 259 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 31102 ggcctggcctcctgcagcatggacagcacctccctcatcgacggccgctcctgcgggcac 31043 Query: 260 cggctcgtgcacagcagcgccacccgcagcaccagcgccatttcctcccgcg 311 ||||| ||||||||||||||||||| ||| |||||||||| || ||||||| Sbjct: 31042 cggctggtgcacagcagcgccaccctaagcgccagcgccatctcgtcccgcg 30991
>dbj|AK105581.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-E05, full insert sequence Length = 1568 Score = 159 bits (80), Expect = 9e-36 Identities = 104/112 (92%) Strand = Plus / Minus Query: 200 ggcctggcctcctgcagcatggacagcacgtccctcatcgacggccggtcctgcgggcac 259 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 1407 ggcctggcctcctgcagcatggacagcacctccctcatcgacggccgctcctgcgggcac 1348 Query: 260 cggctcgtgcacagcagcgccacccgcagcaccagcgccatttcctcccgcg 311 ||||| ||||||||||||||||||| ||| |||||||||| || ||||||| Sbjct: 1347 cggctggtgcacagcagcgccaccctaagcgccagcgccatctcgtcccgcg 1296
>ref|XM_470202.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3093 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 265 cgtgcacagcagcgccacccgcagcaccagcgccatttcctcccg 309 ||||||||||| ||||||||||||||||||| ||| |||||||| Sbjct: 2934 cgtgcacagcaccgccacccgcagcaccagcagcatctcctcccg 2890
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 265 cgtgcacagcagcgccacccgcagcaccagcgccatttcctcccg 309 ||||||||||| ||||||||||||||||||| ||| |||||||| Sbjct: 2477642 cgtgcacagcaccgccacccgcagcaccagcagcatctcctcccg 2477686
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 265 cgtgcacagcagcgccacccgcagcaccagcgccatttcctcccg 309 ||||||||||| ||||||||||||||||||| ||| |||||||| Sbjct: 2477752 cgtgcacagcaccgccacccgcagcaccagcagcatctcctcccg 2477796
>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09, complete sequence Length = 106057 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 265 cgtgcacagcagcgccacccgcagcaccagcgccatttcctcccg 309 ||||||||||| ||||||||||||||||||| ||| |||||||| Sbjct: 50138 cgtgcacagcaccgccacccgcagcaccagcagcatctcctcccg 50182
>dbj|AB029035.1| Homo sapiens mRNA for KIAA1112 protein, partial cds Length = 3800 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 194 ggcctgggcctggcctcctgcagca 218 ||||||||||||||||||||||||| Sbjct: 2400 ggcctgggcctggcctcctgcagca 2376
>ref|NM_032995.1| Homo sapiens Rho guanine nucleotide exchange factor (GEF) 4 (ARHGEF4), transcript variant 2, mRNA Length = 4258 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 194 ggcctgggcctggcctcctgcagca 218 ||||||||||||||||||||||||| Sbjct: 2846 ggcctgggcctggcctcctgcagca 2822
>gb|AC009477.4| Homo sapiens BAC clone RP11-209H16 from 2, complete sequence Length = 173071 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 194 ggcctgggcctggcctcctgcagca 218 ||||||||||||||||||||||||| Sbjct: 21942 ggcctgggcctggcctcctgcagca 21918
>ref|XM_463619.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3303 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Minus Query: 355 gccgcccccgccgccggcgacct 377 ||||||||||||||||||||||| Sbjct: 167 gccgcccccgccgccggcgacct 145
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 355 gccgcccccgccgccggcgacct 377 ||||||||||||||||||||||| Sbjct: 40099991 gccgcccccgccgccggcgacct 40100013 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 gccgcccccgccgccggcgacctt 378 |||||| ||||||||||||||||| Sbjct: 40583578 gccgccgccgccgccggcgacctt 40583555 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 gccgcccccgccgccggcga 374 |||||||||||||||||||| Sbjct: 23573908 gccgcccccgccgccggcga 23573927
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11 Length = 154292 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 355 gccgcccccgccgccggcgacct 377 ||||||||||||||||||||||| Sbjct: 43075 gccgcccccgccgccggcgacct 43097
>gb|U33175.1|OSU33175 Oryza sativa sucrose phosphate synthase gene, complete cds Length = 7150 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Minus Query: 355 gccgcccccgccgccggcgacct 377 ||||||||||||||||||||||| Sbjct: 1810 gccgcccccgccgccggcgacct 1788
>gb|AY100633.1| Borrelia garinii strain Ip90 vls recombination cassette locus, complete sequence Length = 5897 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 274 cagcgccacccgcagcaccagcgcca 299 |||||||||| ||||||||||||||| Sbjct: 859 cagcgccacctgcagcaccagcgcca 834
>ref|XM_464325.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1266 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 gccgcccccgccgccggcgac 375 ||||||||||||||||||||| Sbjct: 1183 gccgcccccgccgccggcgac 1203
>emb|CR855994.1| Wallaby DNA sequence from clone MEKBa-69G12, complete sequence Length = 174698 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 tctggctgggcctgggcctgg 206 ||||||||||||||||||||| Sbjct: 85336 tctggctgggcctgggcctgg 85356
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 349 gcgcaagccgcccccgccgccggcg 373 ||||||||||| ||||||||||||| Sbjct: 212768 gcgcaagccgcgcccgccgccggcg 212792
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 349 gcgcaagccgcccccgccgccggcg 373 ||||||||||| ||||||||||||| Sbjct: 124794 gcgcaagccgcgcccgccgccggcg 124818
>gb|AC161756.3| Mus musculus BAC clone RP24-106J5 from chromosome 16, complete sequence Length = 219500 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 cttctggctgggcctgggcct 204 ||||||||||||||||||||| Sbjct: 100237 cttctggctgggcctgggcct 100257
>dbj|AK051479.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130052A11 product:unclassifiable, full insert sequence Length = 2555 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 cttctggctgggcctgggcct 204 ||||||||||||||||||||| Sbjct: 1528 cttctggctgggcctgggcct 1548
>gb|U77671.1|BBU77671 Bordetella bronchiseptica putative ferric siderophore receptor (bfrB) gene, complete cds Length = 2670 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 349 gcgcaagccgcccccgccgccggcg 373 ||||||||||| ||||||||||||| Sbjct: 298 gcgcaagccgcgcccgccgccggcg 322
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 cgcaagccgcccccgccgccggcga 374 ||||||||||| ||||||||||||| Sbjct: 1896560 cgcaagccgccgccgccgccggcga 1896536 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 gccgcccccgccgccggcgacctt 378 |||||| ||||||||||||||||| Sbjct: 21131053 gccgccgccgccgccggcgacctt 21131030
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 gccgcccccgccgccggcgac 375 ||||||||||||||||||||| Sbjct: 4483384 gccgcccccgccgccggcgac 4483404
>gb|AC025716.2| Caenorhabditis elegans cosmid Y39G10AR, complete sequence Length = 132558 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 tgaatgcaaccggttaaaagc 82 ||||||||||||||||||||| Sbjct: 71011 tgaatgcaaccggttaaaagc 70991
>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548D03 Length = 156709 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 cgcaagccgcccccgccgccggcga 374 ||||||||||| ||||||||||||| Sbjct: 25340 cgcaagccgccgccgccgccggcga 25316
>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001H02 Length = 147160 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 cgcaagccgcccccgccgccggcga 374 ||||||||||| ||||||||||||| Sbjct: 97038 cgcaagccgccgccgccgccggcga 97014
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1297_C09 Length = 163378 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 gccgcccccgccgccggcgac 375 ||||||||||||||||||||| Sbjct: 18763 gccgcccccgccgccggcgac 18783
>gb|AC154052.1| Drosophila melanogaster clone BACR01B21, complete sequence Length = 167163 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctcctgcagcatggacagca 227 |||||||||||||||||||| Sbjct: 48965 ctcctgcagcatggacagca 48984
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 357 cgcccccgccgccggcgaccttgc 380 |||||||| ||||||||||||||| Sbjct: 7554 cgcccccggcgccggcgaccttgc 7531
>gb|AC113448.14| Mus musculus chromosome 15, clone RP23-1N23, complete sequence Length = 216103 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tgcatctcacccagtctaca 397 |||||||||||||||||||| Sbjct: 210936 tgcatctcacccagtctaca 210955
>gb|AC092241.2| Drosophila melanogaster clone BACR09F02, complete sequence Length = 178190 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcccccgccgccggcgacct 377 |||||||||||||||||||| Sbjct: 133381 gcccccgccgccggcgacct 133400
>gb|AC136378.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0047D03, complete sequence Length = 126165 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ccgcccccgccgccggcgac 375 |||||||||||||||||||| Sbjct: 86443 ccgcccccgccgccggcgac 86424
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 atttatcaagaggaaaaatg 41 |||||||||||||||||||| Sbjct: 99870 atttatcaagaggaaaaatg 99889
>ref|NM_015686.2| Homo sapiens transmembrane protein 28 (TMEM28), mRNA Length = 4050 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 aagccgcccccgccgccggc 372 |||||||||||||||||||| Sbjct: 416 aagccgcccccgccgccggc 435
>gb|BC069003.1| Homo sapiens cDNA clone IMAGE:5441406, partial cds Length = 1572 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 gggcctgggcctggcctcct 212 |||||||||||||||||||| Sbjct: 24 gggcctgggcctggcctcct 43
>gb|AC136787.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052B22, complete sequence Length = 156725 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ccgcccccgccgccggcgac 375 |||||||||||||||||||| Sbjct: 20944 ccgcccccgccgccggcgac 20925
>gb|AC134790.6| Mus musculus chromosome 15, clone RP24-541O5, complete sequence Length = 185593 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 tgcatctcacccagtctaca 397 |||||||||||||||||||| Sbjct: 161442 tgcatctcacccagtctaca 161423
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 acagcagcgccacccgcagcacca 293 |||||||| ||||||||||||||| Sbjct: 655244 acagcagccccacccgcagcacca 655221
>gb|AC093709.2| Pan troglodytes clone RP43-180A19, complete sequence Length = 195646 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gctgggcctgggcctggcct 209 |||||||||||||||||||| Sbjct: 25934 gctgggcctgggcctggcct 25953
>emb|CR673336.2|CNS0FIIM Tetraodon nigroviridis full-length cDNA Length = 1098 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcctgcagcatggacagcac 228 |||||||||||||||||||| Sbjct: 578 tcctgcagcatggacagcac 559
>emb|CR640030.2|CNS0ESTG Tetraodon nigroviridis full-length cDNA Length = 1108 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcctgcagcatggacagcac 228 |||||||||||||||||||| Sbjct: 572 tcctgcagcatggacagcac 553
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 270 acagcagcgccacccgcagcaccagcgc 297 |||||||||||||| ||| ||||||||| Sbjct: 4353068 acagcagcgccaccagcaccaccagcgc 4353095
>gb|AC134517.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1325D05, complete sequence Length = 136214 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 cgcgcaagccgcccccgccgccgg 371 ||||||||||||| |||||||||| Sbjct: 98840 cgcgcaagccgccgccgccgccgg 98863
>emb|AL158069.16| Human DNA sequence from clone RP13-57D9 on chromosome Xq11.2-13.2 Contains the gene for TED protein (TED), the 5' end of the ED1 gene for ectodermal dysplasia 1, anhidrotic, two novel genes and three CpG islands, complete sequence Length = 186538 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 aagccgcccccgccgccggc 372 |||||||||||||||||||| Sbjct: 8167 aagccgcccccgccgccggc 8186
>emb|AL136376.10| Human DNA sequence from clone RP4-655J12 on chromosome 1p12-13.3 Contains two novel genes, the ATP1A1 gene for ATPase (Na+/K+ transporting) alpha 1, the 3' end of a novel gene and one CpG island, complete sequence Length = 71008 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 gggcctgggcctggcctcct 212 |||||||||||||||||||| Sbjct: 57163 gggcctgggcctggcctcct 57144
>emb|AL078605.30|HSJ894D12 Human DNA sequence from clone RP5-894D12 on chromosome 6q26-27 Contains the 5' end of the gene for KIAA1838, the DLL1 gene for delta-like 1 (mouse) homolog, the 3' end of a novel gene and 5 CpG islands, complete sequence Length = 119563 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 cttctggctgggcctgggcc 203 |||||||||||||||||||| Sbjct: 78820 cttctggctgggcctgggcc 78839
>gb|AC092406.3| Papio anubis clone RP41-326L21, complete sequence Length = 192030 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gctgggcctgggcctggcct 209 |||||||||||||||||||| Sbjct: 158335 gctgggcctgggcctggcct 158354
>emb|X58711.1|MSHSP182 M.sativa mRNA for heat shock protein (clone pMsHsp18.2) Length = 655 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 agcacacaaaacacacatga 125 |||||||||||||||||||| Sbjct: 578 agcacacaaaacacacatga 559
>gb|AE008698.1| Salmonella typhimurium LT2, section 6 of 220 of the complete genome Length = 20558 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 cctcccgcgctgcctcgctgctac 326 |||||||||| ||||||||||||| Sbjct: 7024 cctcccgcgccgcctcgctgctac 7001
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 356 ccgcccccgccgccggcgaccttg 379 ||||||| |||||||||||||||| Sbjct: 1956913 ccgccccggccgccggcgaccttg 1956936
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 265 cgtgcacagcagcgccacccgcagcaccagcgccat 300 ||||| ||||||||||| |||||| | ||||||||| Sbjct: 7202 cgtgcccagcagcgccagccgcaggatcagcgccat 7237
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 265 cgtgcacagcagcgccacccgcagcaccagcgccat 300 ||||| ||||||||||| |||||| | ||||||||| Sbjct: 300473 cgtgcccagcagcgccagccgcaggatcagcgccat 300508
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 265 cgtgcacagcagcgccacccgcagcaccagcgccat 300 ||||| ||||||||||| |||||| | ||||||||| Sbjct: 69559 cgtgcccagcagcgccagccgcaggatcagcgccat 69524
>gb|AC163742.4| Mus musculus BAC clone RP23-383K19 from chromosome 14, complete sequence Length = 199109 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ttaaaagctcactcagggta 94 |||||||||||||||||||| Sbjct: 29007 ttaaaagctcactcagggta 29026
>emb|AL627265.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 1/20 Length = 251050 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 cctcccgcgctgcctcgctgctac 326 |||||||||| ||||||||||||| Sbjct: 115083 cctcccgcgccgcctcgctgctac 115060
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gcagcgccacccgcagcacc 292 |||||||||||||||||||| Sbjct: 3932831 gcagcgccacccgcagcacc 3932850
>gb|AC160984.3| Mus musculus BAC clone RP23-260C12 from chromosome 14, complete sequence Length = 206110 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ttaaaagctcactcagggta 94 |||||||||||||||||||| Sbjct: 60398 ttaaaagctcactcagggta 60379
>gb|AC009381.10| Drosophila melanogaster 3L BAC RP98-13N10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167816 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctcctgcagcatggacagca 227 |||||||||||||||||||| Sbjct: 167746 ctcctgcagcatggacagca 167765
>gb|BC098428.1| Homo sapiens cDNA clone IMAGE:4541678 Length = 1868 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 gggcctgggcctggcctcct 212 |||||||||||||||||||| Sbjct: 32 gggcctgggcctggcctcct 51
>gb|AC004491.2| Homo sapiens BAC clone CTB-139P11 from 7q11-q21, complete sequence Length = 175839 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gctgggcctgggcctggcct 209 |||||||||||||||||||| Sbjct: 143702 gctgggcctgggcctggcct 143683
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gcagcgccacccgcagcacc 292 |||||||||||||||||||| Sbjct: 86149 gcagcgccacccgcagcacc 86130
>emb|CR596297.1| full-length cDNA clone CS0DI083YG18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1542 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 gggcctgggcctggcctcct 212 |||||||||||||||||||| Sbjct: 11 gggcctgggcctggcctcct 30
>gb|AC090482.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0015I18, from chromosome 10, complete sequence Length = 161479 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 cgcgcaagccgcccccgccgccgg 371 ||||||||||||| |||||||||| Sbjct: 138854 cgcgcaagccgccgccgccgccgg 138831
>ref|NM_080047.2| Drosophila melanogaster kohtalo CG8491-RA (kto), mRNA Length = 7740 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctcctgcagcatggacagca 227 |||||||||||||||||||| Sbjct: 83 ctcctgcagcatggacagca 64
>ref|NM_057215.3| Drosophila melanogaster abrupt CG4807-RB, transcript variant B (ab), mRNA Length = 5110 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcccccgccgccggcgacct 377 |||||||||||||||||||| Sbjct: 817 gcccccgccgccggcgacct 836
>ref|NM_057214.3| Drosophila melanogaster abrupt CG4807-RA, transcript variant A (ab), mRNA Length = 5140 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcccccgccgccggcgacct 377 |||||||||||||||||||| Sbjct: 817 gcccccgccgccggcgacct 836
>gb|AC157513.2| Mus musculus BAC clone RP24-280G4 from chromosome 9, complete sequence Length = 177728 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aggagcacacaaaacacaca 122 |||||||||||||||||||| Sbjct: 110998 aggagcacacaaaacacaca 111017
>gb|AY702971.1| Desulfovibrio gigas putative tRNA delta (2)-isopentenylpyrophosphate transferase (miaA), putative phosphopantetheine adenylyltransferase (coaD), putative N6-adenine-specific methylase, putative beta-lactamase fold exonuclease, flavoredoxin (flr), hypothetical metal binding protein, putative rRNA pseudouridine synthase B, putative outer membrane lipoprotein carrier protein (lolA), and putative membrane protein (ftsK) genes, complete cds; and translation elongation factor P gene, partial cds Length = 11000 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 gccgcccccgccgccggcga 374 |||||||||||||||||||| Sbjct: 9878 gccgcccccgccgccggcga 9859
>gb|AF324426.1|AF324426 Drosophila melanogaster transcriptional coactivator kohtalo (kto) mRNA, complete cds Length = 7742 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctcctgcagcatggacagca 227 |||||||||||||||||||| Sbjct: 83 ctcctgcagcatggacagca 64
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ccgcccccgccgccggcgac 375 |||||||||||||||||||| Sbjct: 16705329 ccgcccccgccgccggcgac 16705310
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 cgcgcaagccgcccccgccgccgg 371 ||||||||||||| |||||||||| Sbjct: 9227563 cgcgcaagccgccgccgccgccgg 9227586
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 357 cgcccccgccgccggcgaccttgc 380 |||||||| ||||||||||||||| Sbjct: 18479548 cgcccccggcgccggcgaccttgc 18479525 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 357 cgcccccgccgccggcgaccttgc 380 |||||||| ||||||||||||||| Sbjct: 18468089 cgcccccggcgccggcgaccttgc 18468066 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 cgccgacgtgctccatcacgtcgc 350 ||||||| |||||||||||||||| Sbjct: 15894077 cgccgacctgctccatcacgtcgc 15894054
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 atttatcaagaggaaaaatg 41 |||||||||||||||||||| Sbjct: 27869453 atttatcaagaggaaaaatg 27869472
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 ggctgggcctgggcctggcc 208 |||||||||||||||||||| Sbjct: 1271979 ggctgggcctgggcctggcc 1271960
>gb|AC147785.3| Pan troglodytes BAC clone RP43-147G4 from chromosome 7, complete sequence Length = 166701 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gctgggcctgggcctggcct 209 |||||||||||||||||||| Sbjct: 100700 gctgggcctgggcctggcct 100719
>gb|AC004904.1|AC004904 Homo sapiens PAC clone RP5-828F13 from 1, complete sequence Length = 126041 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 gggcctgggcctggcctcct 212 |||||||||||||||||||| Sbjct: 83448 gggcctgggcctggcctcct 83429
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 gccgcccccgccgccggcgacctt 378 |||||| ||||||||||||||||| Sbjct: 25556 gccgccgccgccgccggcgacctt 25533
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 tcgccgccggcttctggctgggcc 197 ||||||||||||||||||| |||| Sbjct: 8477292 tcgccgccggcttctggctcggcc 8477315
>gb|AE004894.1| Pseudomonas aeruginosa PAO1, section 455 of 529 of the complete genome Length = 10256 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 ggctgggcctgggcctggcc 208 |||||||||||||||||||| Sbjct: 3535 ggctgggcctgggcctggcc 3516
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 cctcccgcgctgcctcgctgctac 326 |||||||||| ||||||||||||| Sbjct: 115175 cctcccgcgccgcctcgctgctac 115152
>gb|AF220261.1|AF220261 Drosophila virilis transcription elongation factor TFIIS (TFIIS) gene, complete cds Length = 1968 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 gcagcaccagcgccatttcc 304 |||||||||||||||||||| Sbjct: 1124 gcagcaccagcgccatttcc 1143
>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463D04 Length = 145828 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 357 cgcccccgccgccggcgaccttgc 380 |||||||| ||||||||||||||| Sbjct: 141422 cgcccccggcgccggcgaccttgc 141399 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 357 cgcccccgccgccggcgaccttgc 380 |||||||| ||||||||||||||| Sbjct: 129963 cgcccccggcgccggcgaccttgc 129940
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 gccgcccccgccgccggcga 374 |||||||||||||||||||| Sbjct: 36607 gccgcccccgccgccggcga 36626
>dbj|AP003762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456F09 Length = 141336 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 gccgcccccgccgccggcgacctt 378 |||||| ||||||||||||||||| Sbjct: 29714 gccgccgccgccgccggcgacctt 29691
>dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E12 Length = 139750 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 gccgcccccgccgccggcgacctt 378 |||||| ||||||||||||||||| Sbjct: 128054 gccgccgccgccgccggcgacctt 128031
>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025A05 Length = 154298 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 gccgcccccgccgccggcga 374 |||||||||||||||||||| Sbjct: 137213 gccgcccccgccgccggcga 137232
>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1081_G10 Length = 107955 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 cgccgacgtgctccatcacgtcgc 350 ||||||| |||||||||||||||| Sbjct: 57203 cgccgacctgctccatcacgtcgc 57180
>emb|AL929390.14| Mouse DNA sequence from clone RP23-107J3 on chromosome 4, complete sequence Length = 146977 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 391 gtctacaatgttgctgccctctcc 414 ||||||||||||||||||| |||| Sbjct: 139881 gtctacaatgttgctgccccctcc 139858
>dbj|AK108029.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-B01, full insert sequence Length = 1723 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 cgcccccgccgccggcgaccttgc 380 |||||||| ||||||||||||||| Sbjct: 1496 cgcccccggcgccggcgaccttgc 1519
>dbj|AK105666.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-H10, full insert sequence Length = 1608 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 357 cgcccccgccgccggcgaccttgc 380 |||||||| ||||||||||||||| Sbjct: 445 cgcccccggcgccggcgaccttgc 422
>dbj|AK103977.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G02, full insert sequence Length = 1288 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 gccgcccccgccgccggcgacctt 378 |||||| ||||||||||||||||| Sbjct: 254 gccgccgccgccgccggcgacctt 231
>dbj|AK102895.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112N23, full insert sequence Length = 2100 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 gccgcccccgccgccggcga 374 |||||||||||||||||||| Sbjct: 562 gccgcccccgccgccggcga 581
>dbj|AK068862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169F14, full insert sequence Length = 1289 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 gccgcccccgccgccggcgacctt 378 |||||| ||||||||||||||||| Sbjct: 255 gccgccgccgccgccggcgacctt 232
>dbj|AK067562.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112G07, full insert sequence Length = 2074 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 gccgcccccgccgccggcga 374 |||||||||||||||||||| Sbjct: 561 gccgcccccgccgccggcga 580
>dbj|AK065766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041K19, full insert sequence Length = 2013 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 atttatcaagaggaaaaatg 41 |||||||||||||||||||| Sbjct: 590 atttatcaagaggaaaaatg 609
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 cctcccgcgctgcctcgctgctac 326 |||||||||| ||||||||||||| Sbjct: 115074 cctcccgcgccgcctcgctgctac 115051
>gb|AC006073.1|AC006073 Drosophila melanogaster, chromosome 2L, region 32D3-32E2, P1 clones DS05055 and DS02287, complete sequence Length = 94440 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcccccgccgccggcgacct 377 |||||||||||||||||||| Sbjct: 54861 gcccccgccgccggcgacct 54880
>gb|AE003631.4| Drosophila melanogaster chromosome 2L, section 40 of 83 of the complete sequence Length = 256684 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcccccgccgccggcgacct 377 |||||||||||||||||||| Sbjct: 178216 gcccccgccgccggcgacct 178235
>gb|AE003515.4| Drosophila melanogaster chromosome 3L, section 70 of 83 of the complete sequence Length = 234263 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctcctgcagcatggacagca 227 |||||||||||||||||||| Sbjct: 43026 ctcctgcagcatggacagca 43007
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 cctcccgcgctgcctcgctgctac 326 |||||||||| ||||||||||||| Sbjct: 109503 cctcccgcgccgcctcgctgctac 109480
>gb|BT001583.1| Drosophila melanogaster RE25924 full insert cDNA Length = 4854 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcccccgccgccggcgacct 377 |||||||||||||||||||| Sbjct: 818 gcccccgccgccggcgacct 837
>gb|AF087142.1|AF087142 Homo sapiens TED protein (TED) mRNA, complete cds Length = 4042 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 aagccgcccccgccgccggc 372 |||||||||||||||||||| Sbjct: 415 aagccgcccccgccgccggc 434
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 345 cgtcgcgcaagccgcccccgccgccggc 372 ||||| |||||||||||||| ||||||| Sbjct: 2281772 cgtcgagcaagccgcccccgacgccggc 2281745
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 cgcgcaagccgcccccgccgccgg 371 ||||||||||||| |||||||||| Sbjct: 9232702 cgcgcaagccgccgccgccgccgg 9232725
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ccgcccccgccgccggcgac 375 |||||||||||||||||||| Sbjct: 16799152 ccgcccccgccgccggcgac 16799133
>gb|BC018892.2| Homo sapiens chromosome 1 open reading frame 203, mRNA (cDNA clone IMAGE:3953767) Length = 905 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 gggcctgggcctggcctcct 212 |||||||||||||||||||| Sbjct: 8 gggcctgggcctggcctcct 27
>gb|BC007373.2| Homo sapiens chromosome 1 open reading frame 203, mRNA (cDNA clone IMAGE:3636952) Length = 905 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 gggcctgggcctggcctcct 212 |||||||||||||||||||| Sbjct: 8 gggcctgggcctggcctcct 27
>gb|BC028281.1| Homo sapiens chromosome 1 open reading frame 203, mRNA (cDNA clone IMAGE:5169682) Length = 705 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 gggcctgggcctggcctcct 212 |||||||||||||||||||| Sbjct: 24 gggcctgggcctggcctcct 43
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 ggctgggcctgggcctggcc 208 |||||||||||||||||||| Sbjct: 2791084 ggctgggcctgggcctggcc 2791065
>gb|U43733.1|DMU43733 Drosophila melanogaster abrupt (ab) mRNA, complete cds Length = 4498 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcccccgccgccggcgacct 377 |||||||||||||||||||| Sbjct: 178 gcccccgccgccggcgacct 197
>emb|AL603843.15| Mouse DNA sequence from clone RP23-412D17 on chromosome 15, complete sequence Length = 203649 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 ggagcacacaaaacacacatgaca 127 |||||||||||| ||||||||||| Sbjct: 98128 ggagcacacaaagcacacatgaca 98105
>emb|AL772185.10| Mouse DNA sequence from clone RP23-103G12 on chromosome 2, complete sequence Length = 215155 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 ctggctgggcctgggcctgg 206 |||||||||||||||||||| Sbjct: 53526 ctggctgggcctgggcctgg 53507
>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482D04 Length = 144583 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 gccgcccccgccgccggcgacctt 378 |||||| ||||||||||||||||| Sbjct: 63593 gccgccgccgccgccggcgacctt 63570 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,346,523 Number of Sequences: 3902068 Number of extensions: 3346523 Number of successful extensions: 99703 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97452 Number of HSP's gapped (non-prelim): 2251 length of query: 416 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 394 effective length of database: 17,147,199,772 effective search space: 6755996710168 effective search space used: 6755996710168 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
