ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl30g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_020896.2| Homo sapiens oxysterol binding protein-like 5 (... 46 0.095
2ref|NM_145638.1| Homo sapiens oxysterol binding protein-like 5 (... 46 0.095
3emb|AL136918.1|HSM800191 Homo sapiens mRNA; cDNA DKFZp586H1719 (... 46 0.095
4emb|CR617583.1| full-length cDNA clone CS0DI054YD10 of Placenta ... 46 0.095
5dbj|AK056510.1| Homo sapiens cDNA FLJ31948 fis, clone NT2RP70071... 46 0.095
6dbj|AK055617.1| Homo sapiens cDNA FLJ31055 fis, clone HSYRA2000743 46 0.095
7gb|AF392453.1|AF392453 Homo sapiens oxysterol-binding protein-li... 46 0.095
8gb|AC131971.9| Homo sapiens chromosome 11, clone CTC-343N3, comp... 46 0.095
9gb|AC108448.12| Homo sapiens chromosome 11, clone CTD-2544D21, c... 46 0.095
10gb|BC032646.1| Homo sapiens oxysterol binding protein-like 5, tr... 46 0.095
11gb|BC039579.1| Homo sapiens oxysterol binding protein-like 5, tr... 46 0.095
12dbj|AB074006.1| Homo sapiens OBPH1 mRNA for oxysterol binding pr... 46 0.095
13ref|NM_194535.1| Oryza sativa (japonica cultivar-group) putative... 42 1.5
14ref|NM_183723.1| Oryza sativa (japonica cultivar-group), predic... 42 1.5
15ref|XM_469298.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
16ref|XM_471521.1| Oryza sativa (japonica cultivar-group), predic... 42 1.5
17gb|AC148393.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
18gb|AC146938.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
19gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genom... 42 1.5
20gb|AC037197.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
21gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
22gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
23gb|AC133335.4| Oryza sativa chromosome 3 BAC OSJNBa0005H05 genom... 42 1.5
24gb|AC114896.5| Oryza sativa chromosome 3 BAC OSJNBa0091B22 genom... 42 1.5
25gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
26gb|AC136225.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
27gb|AC144736.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
28gb|AC144452.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
29gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 1... 42 1.5
30gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.5
31emb|AL137069.15| Human DNA sequence from clone RP11-167C5 on chr... 42 1.5
32gb|AC133337.5| Oryza sativa chromosome 3 BAC OSJNBa0023A13 genom... 42 1.5
33gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
34emb|AL731604.3|OSJN00247 Oryza sativa genomic DNA, chromosome 4,... 42 1.5
35emb|BX649391.13| Zebrafish DNA sequence from clone DKEY-1K23 in ... 42 1.5
36gb|AC119149.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
37gb|AC068654.2| Genomic Sequence For Oryza sativa (japonica culti... 42 1.5
38dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
39dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
40dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
41dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
42dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
43dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
44dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
45dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
46dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
47dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
48emb|AL731583.2|OSJN00231 Oryza sativa genomic DNA, chromosome 4,... 42 1.5
49gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 geno... 42 1.5
50gb|AC090714.9| Oryza sativa chromosome 3 BAC OSJNBb0031G04 genom... 42 1.5
51dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
52dbj|AP004767.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
53dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
54dbj|AP004180.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
55dbj|AP005745.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
56dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
57dbj|AP004123.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
58gb|AY828170.1| Oryza sativa (japonica cultivar-group) clone noaC... 42 1.5
59gb|AY828167.1| Oryza sativa (japonica cultivar-group) clone noaC... 42 1.5
60gb|AY828160.1| Oryza sativa (japonica cultivar-group) clone noaC... 42 1.5
61gb|AY828121.1| Oryza sativa (japonica cultivar-group) clone noaC... 42 1.5
62gb|AY828060.1| Oryza sativa (japonica cultivar-group) clone noaC... 42 1.5
63gb|AY827971.1| Oryza sativa (japonica cultivar-group) clone noaC... 42 1.5
64gb|AY827965.1| Oryza sativa (japonica cultivar-group) clone noaC... 42 1.5
65dbj|AP005096.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
66gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
67gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
68emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4,... 42 1.5
69ref|NM_103273.1| Arabidopsis thaliana ATP binding / protein kina... 40 5.9
70gb|BT012807.1| Lycopersicon esculentum clone 113827R, mRNA sequence 40 5.9
71emb|AL589872.9| Human DNA sequence from clone RP11-161N3 on chro... 40 5.9
72emb|AL390204.11| Human DNA sequence from clone RP11-196D4 on chr... 40 5.9
73emb|AL138814.13| Human DNA sequence from clone RP11-10M21 on chr... 40 5.9
74emb|AL137847.12| Human DNA sequence from clone RP11-439K3 on chr... 40 5.9
75gb|AC163388.5| Mus musculus chromosome 1, clone RP24-74P5, compl... 40 5.9
76emb|CR759825.7| Zebrafish DNA sequence from clone DKEYP-92E4 in ... 40 5.9
77emb|BX510352.17| Zebrafish DNA sequence from clone DKEY-96J11 in... 40 5.9
78emb|BX571850.7| Zebrafish DNA sequence from clone DKEY-259L18 in... 40 5.9
79gb|AC006065.3| Homo sapiens 12q24.2 BAC RPCI11-407A16 (Roswell P... 40 5.9
80gb|AC102621.12| Mus musculus chromosome 1, clone RP23-429G8, com... 40 5.9
81gb|AC161867.6| Mus musculus chromosome 8, clone RP24-281E22, com... 40 5.9
82gb|AF336797.2|AF336797 Homo sapiens small-conductance calcium-ac... 40 5.9
83gb|AC021198.2|F14D7 Sequence of BAC F14D7 from Arabidopsis thali... 40 5.9
84dbj|AP005608.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
85emb|BX649425.3| Zebrafish DNA sequence from clone CH211-239E6 in... 40 5.9
86gb|AC108915.12| Mus musculus chromosome 8, clone RP23-444O13, co... 40 5.9 
>ref|NM_020896.2| Homo sapiens oxysterol binding protein-like 5 (OSBPL5), transcript
            variant 1, mRNA
          Length = 3873

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 251  acaccttgaaataaacagacaca 273
            |||||||||||||||||||||||
Sbjct: 3821 acaccttgaaataaacagacaca 3843
to top
>ref|NM_145638.1| Homo sapiens oxysterol binding protein-like 5 (OSBPL5), transcript
            variant 2, mRNA
          Length = 3662

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 251  acaccttgaaataaacagacaca 273
            |||||||||||||||||||||||
Sbjct: 3610 acaccttgaaataaacagacaca 3632
to top
>emb|AL136918.1|HSM800191 Homo sapiens mRNA; cDNA DKFZp586H1719 (from clone DKFZp586H1719)
          Length = 3828

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 251  acaccttgaaataaacagacaca 273
            |||||||||||||||||||||||
Sbjct: 3776 acaccttgaaataaacagacaca 3798
to top
>emb|CR617583.1| full-length cDNA clone CS0DI054YD10 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1576

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 251  acaccttgaaataaacagacaca 273
            |||||||||||||||||||||||
Sbjct: 1554 acaccttgaaataaacagacaca 1576
to top
>dbj|AK056510.1| Homo sapiens cDNA FLJ31948 fis, clone NT2RP7007100, highly similar to
            Mus musculus domesticus partial mRNA for
            oxystyrol-binding protein
          Length = 3842

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 251  acaccttgaaataaacagacaca 273
            |||||||||||||||||||||||
Sbjct: 3811 acaccttgaaataaacagacaca 3833
to top
>dbj|AK055617.1| Homo sapiens cDNA FLJ31055 fis, clone HSYRA2000743
          Length = 3229

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 251  acaccttgaaataaacagacaca 273
            |||||||||||||||||||||||
Sbjct: 3197 acaccttgaaataaacagacaca 3219
to top
>gb|AF392453.1|AF392453 Homo sapiens oxysterol-binding protein-like protein OSBPL5 (OSBPL5)
            mRNA, complete cds
          Length = 3810

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 251  acaccttgaaataaacagacaca 273
            |||||||||||||||||||||||
Sbjct: 3774 acaccttgaaataaacagacaca 3796
to top
>gb|AC131971.9| Homo sapiens chromosome 11, clone CTC-343N3, complete sequence
          Length = 176226

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 251   acaccttgaaataaacagacaca 273
             |||||||||||||||||||||||
Sbjct: 10104 acaccttgaaataaacagacaca 10126
to top
>gb|AC108448.12| Homo sapiens chromosome 11, clone CTD-2544D21, complete sequence
          Length = 198599

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 251   acaccttgaaataaacagacaca 273
             |||||||||||||||||||||||
Sbjct: 48217 acaccttgaaataaacagacaca 48195
to top
>gb|BC032646.1| Homo sapiens oxysterol binding protein-like 5, transcript variant 2,
            mRNA (cDNA clone MGC:44908 IMAGE:5518491), complete cds
          Length = 3650

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 251  acaccttgaaataaacagacaca 273
            |||||||||||||||||||||||
Sbjct: 3574 acaccttgaaataaacagacaca 3596
to top
>gb|BC039579.1| Homo sapiens oxysterol binding protein-like 5, transcript variant 1,
            mRNA (cDNA clone MGC:48715 IMAGE:5769002), complete cds
          Length = 3852

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 251  acaccttgaaataaacagacaca 273
            |||||||||||||||||||||||
Sbjct: 3775 acaccttgaaataaacagacaca 3797
to top
>dbj|AB074006.1| Homo sapiens OBPH1 mRNA for oxysterol binding protein homologue 1,
            complete cds
          Length = 3836

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 251  acaccttgaaataaacagacaca 273
            |||||||||||||||||||||||
Sbjct: 3805 acaccttgaaataaacagacaca 3827
to top
>ref|NM_194535.1| Oryza sativa (japonica cultivar-group) putative retroelement
           (OSJNBa0015O22.1), mRNA
          Length = 2967

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 tgggatgaatgcaaaacaatg 343
           |||||||||||||||||||||
Sbjct: 313 tgggatgaatgcaaaacaatg 333
to top
>ref|NM_183723.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1413

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 tgggatgaatgcaaaacaatg 343
           |||||||||||||||||||||
Sbjct: 313 tgggatgaatgcaaaacaatg 333
to top
>ref|XM_469298.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1128

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 tgggatgaatgcaaaacaatg 343
           |||||||||||||||||||||
Sbjct: 772 tgggatgaatgcaaaacaatg 792
to top
>ref|XM_471521.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1872

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 tgggatgaatgcaaaacaatg 343
           |||||||||||||||||||||
Sbjct: 127 tgggatgaatgcaaaacaatg 147
to top
>gb|AC148393.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0044A08 map near S6115, complete sequence
          Length = 158583

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 323   tgggatgaatgcaaaacaatg 343
             |||||||||||||||||||||
Sbjct: 26703 tgggatgaatgcaaaacaatg 26683
to top
>gb|AC146938.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062O09
              map near S6115, complete sequence
          Length = 148654

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 323    tgggatgaatgcaaaacaatg 343
              |||||||||||||||||||||
Sbjct: 120406 tgggatgaatgcaaaacaatg 120386
to top
>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete
             sequence
          Length = 132981

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 323   tgggatgaatgcaaaacaatg 343
             |||||||||||||||||||||
Sbjct: 58268 tgggatgaatgcaaaacaatg 58288
to top
>gb|AC037197.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0065H03,
              complete sequence
          Length = 141017

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 323    tgggatgaatgcaaaacaatg 343
              |||||||||||||||||||||
Sbjct: 141005 tgggatgaatgcaaaacaatg 140985
to top
>gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0094J09,
              complete sequence
          Length = 168192

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 323    tgggatgaatgcaaaacaatg 343
              |||||||||||||||||||||
Sbjct: 112411 tgggatgaatgcaaaacaatg 112391
to top
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNAa0068G15, complete sequence
          Length = 130161

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 323   tgggatgaatgcaaaacaatg 343
             |||||||||||||||||||||
Sbjct: 87951 tgggatgaatgcaaaacaatg 87971
to top
>gb|AC133335.4| Oryza sativa chromosome 3 BAC OSJNBa0005H05 genomic sequence, complete
             sequence
          Length = 55268

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 323   tgggatgaatgcaaaacaatg 343
             |||||||||||||||||||||
Sbjct: 28862 tgggatgaatgcaaaacaatg 28842
to top
>gb|AC114896.5| Oryza sativa chromosome 3 BAC OSJNBa0091B22 genomic sequence, complete
              sequence
          Length = 115815

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 323    tgggatgaatgcaaaacaatg 343
              |||||||||||||||||||||
Sbjct: 107708 tgggatgaatgcaaaacaatg 107688
to top
>gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0088F07, complete sequence
          Length = 139180

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 323   tgggatgaatgcaaaacaatg 343
             |||||||||||||||||||||
Sbjct: 73885 tgggatgaatgcaaaacaatg 73905
to top
>gb|AC136225.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0022L07, complete sequence
          Length = 142134

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 323   tgggatgaatgcaaaacaatg 343
             |||||||||||||||||||||
Sbjct: 98623 tgggatgaatgcaaaacaatg 98603
to top
>gb|AC144736.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
            OSJNBa0008E07, complete sequence
          Length = 146679

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 323  tgggatgaatgcaaaacaatg 343
            |||||||||||||||||||||
Sbjct: 2628 tgggatgaatgcaaaacaatg 2608
to top
>gb|AC144452.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
              OSJNBa0025G07, complete sequence
          Length = 167136

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 323    tgggatgaatgcaaaacaatg 343
              |||||||||||||||||||||
Sbjct: 112262 tgggatgaatgcaaaacaatg 112242
to top
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06,
             complete sequence
          Length = 185449

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 323   tgggatgaatgcaaaacaatg 343
             |||||||||||||||||||||
Sbjct: 17790 tgggatgaatgcaaaacaatg 17810
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 26609144 tgggatgaatgcaaaacaatg 26609124



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 19851872 tgggatgaatgcaaaacaatg 19851852



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 18153663 tgggatgaatgcaaaacaatg 18153683



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 17784407 tgggatgaatgcaaaacaatg 17784427
to top
>emb|AL137069.15| Human DNA sequence from clone RP11-167C5 on chromosome 9 Contains part of
              a variant of the PTPRD gene for protein tyrosine
              phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete
              sequence
          Length = 171852

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 151    ttgttcttttccacccgccag 171
              |||||||||||||||||||||
Sbjct: 102603 ttgttcttttccacccgccag 102623
to top
>gb|AC133337.5| Oryza sativa chromosome 3 BAC OSJNBa0023A13 genomic sequence, complete
             sequence
          Length = 72745

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 323   tgggatgaatgcaaaacaatg 343
             |||||||||||||||||||||
Sbjct: 44871 tgggatgaatgcaaaacaatg 44851
to top
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
              Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 323    tgggatgaatgcaaaacaatg 343
              |||||||||||||||||||||
Sbjct: 536831 tgggatgaatgcaaaacaatg 536811
to top
>emb|AL731604.3|OSJN00247 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042D13,
              complete sequence
          Length = 163429

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 323    tgggatgaatgcaaaacaatg 343
              |||||||||||||||||||||
Sbjct: 138758 tgggatgaatgcaaaacaatg 138778
to top
>emb|BX649391.13| Zebrafish DNA sequence from clone DKEY-1K23 in linkage group 5,
             complete sequence
          Length = 133337

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 64    agagttccacaaaataataca 84
             |||||||||||||||||||||
Sbjct: 67620 agagttccacaaaataataca 67600
to top
>gb|AC119149.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0079E01, complete sequence
          Length = 132870

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 323   tgggatgaatgcaaaacaatg 343
             |||||||||||||||||||||
Sbjct: 93160 tgggatgaatgcaaaacaatg 93140
to top
>gb|AC068654.2| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar
            Nipponbare Clone OSJNBa0015O22 From Chromosome 10,
            complete sequence
          Length = 189349

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 323  tgggatgaatgcaaaacaatg 343
            |||||||||||||||||||||
Sbjct: 4439 tgggatgaatgcaaaacaatg 4419
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 11610207 tgggatgaatgcaaaacaatg 11610187



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 10639421 tgggatgaatgcaaaacaatg 10639441
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 12519429 tgggatgaatgcaaaacaatg 12519449



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 323     tgggatgaatgcaaaacaatg 343
               |||||||||||||||||||||
Sbjct: 1946235 tgggatgaatgcaaaacaatg 1946255
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 12313255 tgggatgaatgcaaaacaatg 12313235



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 323     tgggatgaatgcaaaacaatg 343
               |||||||||||||||||||||
Sbjct: 7999543 tgggatgaatgcaaaacaatg 7999563



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 323    tgggatgaatgcaaaacaatg 343
              |||||||||||||||||||||
Sbjct: 536831 tgggatgaatgcaaaacaatg 536811
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 323     tgggatgaatgcaaaacaatg 343
               |||||||||||||||||||||
Sbjct: 2934130 tgggatgaatgcaaaacaatg 2934110
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 16253714 tgggatgaatgcaaaacaatg 16253694
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 13522375 tgggatgaatgcaaaacaatg 13522395
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 21193102 tgggatgaatgcaaaacaatg 21193122



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 14239290 tgggatgaatgcaaaacaatg 14239270



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 12235150 tgggatgaatgcaaaacaatg 12235130
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 26700467 tgggatgaatgcaaaacaatg 26700447



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 19844899 tgggatgaatgcaaaacaatg 19844879



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 18147204 tgggatgaatgcaaaacaatg 18147224



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 17777948 tgggatgaatgcaaaacaatg 17777968
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 14011443 tgggatgaatgcaaaacaatg 14011423



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 11450183 tgggatgaatgcaaaacaatg 11450203



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 324      gggatgaatgcaaaacaatg 343
                ||||||||||||||||||||
Sbjct: 15188870 gggatgaatgcaaaacaatg 15188851
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 16510309 tgggatgaatgcaaaacaatg 16510329



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 11825801 tgggatgaatgcaaaacaatg 11825781
to top
>emb|AL731583.2|OSJN00231 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013A04,
             complete sequence
          Length = 188209

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 323   tgggatgaatgcaaaacaatg 343
             |||||||||||||||||||||
Sbjct: 38648 tgggatgaatgcaaaacaatg 38668
to top
>gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 genomic sequence, complete
              sequence
          Length = 136712

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 323    tgggatgaatgcaaaacaatg 343
              |||||||||||||||||||||
Sbjct: 131958 tgggatgaatgcaaaacaatg 131938
to top
>gb|AC090714.9| Oryza sativa chromosome 3 BAC OSJNBb0031G04 genomic sequence,
            complete sequence
          Length = 137297

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 323  tgggatgaatgcaaaacaatg 343
            |||||||||||||||||||||
Sbjct: 4161 tgggatgaatgcaaaacaatg 4141
to top
>dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0030M21
          Length = 155970

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 323   tgggatgaatgcaaaacaatg 343
             |||||||||||||||||||||
Sbjct: 32675 tgggatgaatgcaaaacaatg 32695
to top
>dbj|AP004767.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1460_H08
          Length = 113514

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 323   tgggatgaatgcaaaacaatg 343
             |||||||||||||||||||||
Sbjct: 30979 tgggatgaatgcaaaacaatg 30999
to top
>dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1012D10
          Length = 168267

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 323   tgggatgaatgcaaaacaatg 343
             |||||||||||||||||||||
Sbjct: 38086 tgggatgaatgcaaaacaatg 38066
to top
>dbj|AP004180.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1126_B05
          Length = 117057

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 323   tgggatgaatgcaaaacaatg 343
             |||||||||||||||||||||
Sbjct: 81081 tgggatgaatgcaaaacaatg 81061
to top
>dbj|AP005745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0017O03
          Length = 180651

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 323    tgggatgaatgcaaaacaatg 343
              |||||||||||||||||||||
Sbjct: 125122 tgggatgaatgcaaaacaatg 125102
to top
>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1123E10
          Length = 134641

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 323    tgggatgaatgcaaaacaatg 343
              |||||||||||||||||||||
Sbjct: 102058 tgggatgaatgcaaaacaatg 102078
to top
>dbj|AP004123.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1654_A02
          Length = 128520

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 323    tgggatgaatgcaaaacaatg 343
              |||||||||||||||||||||
Sbjct: 119655 tgggatgaatgcaaaacaatg 119675
to top
>gb|AY828170.1| Oryza sativa (japonica cultivar-group) clone noaCRR1_CH10-12 noaCRR1
            retrotransposon, partial sequence
          Length = 4424

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 323  tgggatgaatgcaaaacaatg 343
            |||||||||||||||||||||
Sbjct: 2518 tgggatgaatgcaaaacaatg 2538
to top
>gb|AY828167.1| Oryza sativa (japonica cultivar-group) clone noaCRR1_CH10-9 noaCRR1
            retrotransposon, partial sequence
          Length = 5134

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 323  tgggatgaatgcaaaacaatg 343
            |||||||||||||||||||||
Sbjct: 3192 tgggatgaatgcaaaacaatg 3212
to top
>gb|AY828160.1| Oryza sativa (japonica cultivar-group) clone noaCRR1_CH10-2 noaCRR1
            retrotransposon, partial sequence
          Length = 4436

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 323  tgggatgaatgcaaaacaatg 343
            |||||||||||||||||||||
Sbjct: 2531 tgggatgaatgcaaaacaatg 2551
to top
>gb|AY828121.1| Oryza sativa (japonica cultivar-group) clone noaCRR1_CH8-13 noaCRR1
            retrotransposon, partial sequence
          Length = 4834

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 323  tgggatgaatgcaaaacaatg 343
            |||||||||||||||||||||
Sbjct: 2681 tgggatgaatgcaaaacaatg 2701
to top
>gb|AY828060.1| Oryza sativa (japonica cultivar-group) clone noaCRR1_CH4-26 noaCRR1
            retrotransposon, partial sequence
          Length = 3827

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 323  tgggatgaatgcaaaacaatg 343
            |||||||||||||||||||||
Sbjct: 1953 tgggatgaatgcaaaacaatg 1973
to top
>gb|AY827971.1| Oryza sativa (japonica cultivar-group) clone noaCRR1_CH1-10 noaCRR1
            retrotransposon, partial sequence
          Length = 4140

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 323  tgggatgaatgcaaaacaatg 343
            |||||||||||||||||||||
Sbjct: 2499 tgggatgaatgcaaaacaatg 2519
to top
>gb|AY827965.1| Oryza sativa (japonica cultivar-group) clone noaCRR1_CH1-4 noaCRR1
            retrotransposon, partial sequence
          Length = 4258

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 323  tgggatgaatgcaaaacaatg 343
            |||||||||||||||||||||
Sbjct: 2351 tgggatgaatgcaaaacaatg 2371
to top
>dbj|AP005096.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1104G07
          Length = 119643

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 323   tgggatgaatgcaaaacaatg 343
             |||||||||||||||||||||
Sbjct: 43892 tgggatgaatgcaaaacaatg 43872
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 12320595 tgggatgaatgcaaaacaatg 12320575



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 323     tgggatgaatgcaaaacaatg 343
               |||||||||||||||||||||
Sbjct: 8004642 tgggatgaatgcaaaacaatg 8004662



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 323    tgggatgaatgcaaaacaatg 343
              |||||||||||||||||||||
Sbjct: 536828 tgggatgaatgcaaaacaatg 536808
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 323      tgggatgaatgcaaaacaatg 343
                |||||||||||||||||||||
Sbjct: 12598736 tgggatgaatgcaaaacaatg 12598756



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 323     tgggatgaatgcaaaacaatg 343
               |||||||||||||||||||||
Sbjct: 1954016 tgggatgaatgcaaaacaatg 1954036
to top
>emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0058J09,
             complete sequence
          Length = 164911

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 323   tgggatgaatgcaaaacaatg 343
             |||||||||||||||||||||
Sbjct: 93217 tgggatgaatgcaaaacaatg 93197
to top
>ref|NM_103273.1| Arabidopsis thaliana ATP binding / protein kinase/ protein
           serine/threonine kinase/ protein-tyrosine kinase
           AT1G35710 mRNA, complete cds
          Length = 3658

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 184 agaagctgaaatggaacagc 203
           ||||||||||||||||||||
Sbjct: 84  agaagctgaaatggaacagc 65
to top
>gb|BT012807.1| Lycopersicon esculentum clone 113827R, mRNA sequence
          Length = 978

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 194 atggaacagcagcatagatg 213
           ||||||||||||||||||||
Sbjct: 748 atggaacagcagcatagatg 767
to top
>emb|AL589872.9| Human DNA sequence from clone RP11-161N3 on chromosome X Contains the
             5' end of the gene for a novel protein similar to PHD
             finger protein 2 PHF2, the 3' end of a novel gene, a
             ribosomal protein L37 (RPL37) pseudogene and three CpG
             islands, complete sequence
          Length = 113964

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   tacaattgttcttttccacc 165
             ||||||||||||||||||||
Sbjct: 20735 tacaattgttcttttccacc 20754
to top
>emb|AL390204.11| Human DNA sequence from clone RP11-196D4 on chromosome 1 Contains the
             5' end of the KCNN3 gene for potassium intermediate/small
             conductance calcium-activated channel, subfamily N, member
             3, complete sequence
          Length = 89566

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   gtctcagtttttaaccaaaa 303
             ||||||||||||||||||||
Sbjct: 70763 gtctcagtttttaaccaaaa 70782
to top
>emb|AL138814.13| Human DNA sequence from clone RP11-10M21 on chromosome 13 Contains the
             5' end of a novel gene, complete sequence
          Length = 114290

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   aaaagaacccttacaaaaca 319
             ||||||||||||||||||||
Sbjct: 86796 aaaagaacccttacaaaaca 86777
to top
>emb|AL137847.12| Human DNA sequence from clone RP11-439K3 on chromosome 9q22.2-31.1
              Contains two novel genes, the 3' end of a novel gene
              (MGC20553) and a CpG island, complete sequence
          Length = 143372

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    agcttcaaagaagctgaaat 195
              ||||||||||||||||||||
Sbjct: 128041 agcttcaaagaagctgaaat 128060
to top
>gb|AC163388.5| Mus musculus chromosome 1, clone RP24-74P5, complete sequence
          Length = 208139

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 86    ttcctgtaataaacaaatacaact 109
             ||||| ||||||||||||||||||
Sbjct: 79779 ttcctttaataaacaaatacaact 79802
to top
>emb|CR759825.7| Zebrafish DNA sequence from clone DKEYP-92E4 in linkage group 5,
             complete sequence
          Length = 52769

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    gagttccacaaaataataca 84
             ||||||||||||||||||||
Sbjct: 11980 gagttccacaaaataataca 11999
to top
>emb|BX510352.17| Zebrafish DNA sequence from clone DKEY-96J11 in linkage group 18,
            complete sequence
          Length = 152387

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 71   cacaaaataatacagttcctgtaataaa 98
            ||||||||| || |||||||||||||||
Sbjct: 5771 cacaaaatattatagttcctgtaataaa 5744
to top
>emb|BX571850.7| Zebrafish DNA sequence from clone DKEY-259L18 in linkage group 23,
              complete sequence
          Length = 236136

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    aatgcaaaacaatgcaaatg 349
              ||||||||||||||||||||
Sbjct: 109779 aatgcaaaacaatgcaaatg 109798
to top
>gb|AC006065.3| Homo sapiens 12q24.2 BAC RPCI11-407A16 (Roswell Park Cancer Institute
              Human BAC Library) complete sequence
          Length = 191134

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 385    atgtcccacatggtgaagtt 404
              ||||||||||||||||||||
Sbjct: 99991  atgtcccacatggtgaagtt 100010
to top
>gb|AC102621.12| Mus musculus chromosome 1, clone RP23-429G8, complete sequence
          Length = 175286

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 86     ttcctgtaataaacaaatacaact 109
              ||||| ||||||||||||||||||
Sbjct: 130066 ttcctttaataaacaaatacaact 130089
to top
>gb|AC161867.6| Mus musculus chromosome 8, clone RP24-281E22, complete sequence
          Length = 180410

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 54   ggtaggaggcagagttccac 73
            ||||||||||||||||||||
Sbjct: 4740 ggtaggaggcagagttccac 4759
to top
>gb|AF336797.2|AF336797 Homo sapiens small-conductance calcium-activated potassium channel
             (KCNN3) gene, complete cds
          Length = 163217

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   gtctcagtttttaaccaaaa 303
             ||||||||||||||||||||
Sbjct: 15985 gtctcagtttttaaccaaaa 15966
to top
>gb|AC021198.2|F14D7 Sequence of BAC F14D7 from Arabidopsis thaliana chromosome 1,
            complete sequence
          Length = 81513

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  agaagctgaaatggaacagc 203
            ||||||||||||||||||||
Sbjct: 1636 agaagctgaaatggaacagc 1617
to top
>dbj|AP005608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0008C07
          Length = 146008

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   gggatgaatgcaaaacaatg 343
             ||||||||||||||||||||
Sbjct: 72645 gggatgaatgcaaaacaatg 72626
to top
>emb|BX649425.3| Zebrafish DNA sequence from clone CH211-239E6 in linkage group 4,
             complete sequence
          Length = 133503

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 58    ggaggcagagttccacaaaataat 81
             |||||||||| |||||||||||||
Sbjct: 27823 ggaggcagagctccacaaaataat 27846
to top
>gb|AC108915.12| Mus musculus chromosome 8, clone RP23-444O13, complete sequence
          Length = 178228

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     ggtaggaggcagagttccac 73
              ||||||||||||||||||||
Sbjct: 132875 ggtaggaggcagagttccac 132894


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,642,241
Number of Sequences: 3902068
Number of extensions: 4642241
Number of successful extensions: 82489
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81800
Number of HSP's gapped (non-prelim): 689
length of query: 438
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 416
effective length of database: 17,147,199,772
effective search space: 7133235105152
effective search space used: 7133235105152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top