ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl30g01 |
|---|---|
| Clone Library Name | barley_pub |
>ACOC_CUCMA (P49608) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate| hydro-lyase) (Aconitase) Length = 898 Score = 92.8 bits (229), Expect = 4e-19 Identities = 40/53 (75%), Positives = 49/53 (92%) Frame = -2 Query: 471 NLPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYVIRNM 313 +LP D+ +IRPGQDVT+TT+ GKSFTC +RFDTEVELAY+N+GGILPYVIRN+ Sbjct: 843 DLPDDISKIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFNNGGILPYVIRNL 895
>ACOC_CUCMC (Q42669) Aconitase (EC 4.2.1.3) (Aconitate hydratase) (Citrate| hydro-lyase) (Fragment) Length = 764 Score = 89.7 bits (221), Expect = 3e-18 Identities = 39/53 (73%), Positives = 49/53 (92%) Frame = -2 Query: 471 NLPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYVIRNM 313 +LP++VG+IRPGQDV + T+ GKSF+CILRFDTEVELAY++HGGIL YVIRN+ Sbjct: 707 DLPSNVGEIRPGQDVAVVTDTGKSFSCILRFDTEVELAYFDHGGILQYVIRNL 759
>ACOC_SOLTU (O04916) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate| hydro-lyase) (Aconitase) (Fragment) Length = 616 Score = 87.8 bits (216), Expect = 1e-17 Identities = 38/53 (71%), Positives = 47/53 (88%) Frame = -2 Query: 471 NLPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYVIRNM 313 +LP ++ +IRPGQDVT+ T+ GKSFTCI+RFDTEVELAY+NHGGIL YVIR + Sbjct: 561 DLPENISEIRPGQDVTVQTDTGKSFTCIVRFDTEVELAYFNHGGILQYVIRQL 613
>ACOC_ARATH (Q42560) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate| hydro-lyase) (Aconitase) Length = 898 Score = 87.0 bits (214), Expect = 2e-17 Identities = 38/52 (73%), Positives = 46/52 (88%) Frame = -2 Query: 468 LPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYVIRNM 313 LP +V +I+PGQDVT+ T +GKSFTC LRFDTEVELAY++HGGIL YVIRN+ Sbjct: 844 LPNNVSEIKPGQDVTVVTNNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNL 895
>IREB1_MOUSE (P28271) Iron-responsive element-binding protein 1 (IRE-BP 1) (Iron| regulatory protein 1) (IRP1) (Ferritin repressor protein) (Aconitate hydratase) (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) Length = 889 Score = 56.6 bits (135), Expect = 3e-08 Identities = 26/54 (48%), Positives = 38/54 (70%) Frame = -2 Query: 471 NLPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYVIRNMA 310 N+P D ++P V I + GK+F ++RFDT+VEL Y+++GGIL Y+IR MA Sbjct: 838 NIPED---LKPRMTVQIKLDTGKTFQAVMRFDTDVELTYFHNGGILNYMIRKMA 888
>IREB1_CHICK (Q90875) Iron-responsive element binding protein (IRE-BP) (Iron| regulatory protein) (IRP) (Ferritin repressor protein) (Aconitate hydratase) (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) Length = 889 Score = 54.7 bits (130), Expect = 1e-07 Identities = 23/46 (50%), Positives = 35/46 (76%) Frame = -2 Query: 447 IRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYVIRNMA 310 ++P ++ I + GK+F I+RFDT+VEL Y+++GGIL Y+IR MA Sbjct: 843 LKPQMNIQIKLDTGKTFHAIMRFDTDVELTYFHNGGILNYMIRKMA 888
>IREB1_RAT (Q63270) Iron-responsive element-binding protein 1 (IRE-BP 1) (Iron| regulatory protein 1) (IRP1) (Ferritin repressor protein) (Aconitate hydratase) (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) Length = 889 Score = 54.3 bits (129), Expect = 2e-07 Identities = 23/46 (50%), Positives = 34/46 (73%) Frame = -2 Query: 447 IRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYVIRNMA 310 ++P V I + GK+F ++RFDT+VEL Y+++GGIL Y+IR MA Sbjct: 843 LKPRMKVQIKLDTGKTFQAVMRFDTDVELTYFHNGGILNYMIRKMA 888
>ACOC_CAEEL (Q23500) Probable aconitate hydratase, cytoplasmic (EC 4.2.1.3)| (Citrate hydro-lyase) (Aconitase) Length = 887 Score = 53.9 bits (128), Expect = 2e-07 Identities = 23/45 (51%), Positives = 31/45 (68%) Frame = -2 Query: 447 IRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYVIRNM 313 ++PGQ + + +G F I RFDTEVEL YY +GGIL Y+IR + Sbjct: 841 LKPGQLIDVNVSNGSVFQVICRFDTEVELTYYRNGGILQYMIRKL 885
>IREB1_HUMAN (P21399) Iron-responsive element-binding protein 1 (IRE-BP 1) (Iron| regulatory protein 1) (IRP1) (Ferritin repressor protein) (Aconitate hydratase) (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) Length = 889 Score = 52.4 bits (124), Expect = 6e-07 Identities = 22/46 (47%), Positives = 33/46 (71%) Frame = -2 Query: 447 IRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYVIRNMA 310 ++P V + + GK+F ++RFDT+VEL Y+ +GGIL Y+IR MA Sbjct: 843 LKPQMKVQVKLDTGKTFQAVMRFDTDVELTYFLNGGILNYMIRKMA 888
>IREB1_RABIT (Q01059) Iron-responsive element-binding protein 1 (IRE-BP 1) (Iron| regulatory protein 1) (IRP1) (Ferritin repressor protein) (Aconitate hydratase) (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) Length = 889 Score = 51.2 bits (121), Expect = 1e-06 Identities = 22/46 (47%), Positives = 32/46 (69%) Frame = -2 Query: 447 IRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYVIRNMA 310 + P V + + GK+F ++RFDT+VEL Y ++GGIL Y+IR MA Sbjct: 843 LTPRMHVQVKLDTGKTFQAVIRFDTDVELTYLHNGGILNYMIRKMA 888
>ACON_CORGL (Q8NQ98) Aconitate hydratase (EC 4.2.1.3)| Length = 939 Score = 45.8 bits (107), Expect = 6e-05 Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Frame = -2 Query: 429 VTITTEDGK--SFTCILRFDTEVELAYYNHGGILPYVIRNMAGAQK 298 VT T E+G F ++R DT E YY HGGIL YV+R MA + K Sbjct: 894 VTATKENGDVVEFDAVVRIDTPGEADYYRHGGILQYVLRQMAASSK 939
>ACON_BACSU (P09339) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 908 Score = 44.7 bits (104), Expect = 1e-04 Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 4/47 (8%) Frame = -2 Query: 447 IRPGQDVTITT--EDGK--SFTCILRFDTEVELAYYNHGGILPYVIR 319 +RP VT+ EDG +F ++RFD+EVE+ YY HGGIL V+R Sbjct: 856 VRPRDLVTVRAINEDGNVTTFEAVVRFDSEVEIDYYRHGGILQMVLR 902
>ACON1_ECOLI (P25516) Aconitate hydratase 1 (EC 4.2.1.3) (Citrate hydro-lyase 1)| (Aconitase 1) Length = 890 Score = 44.3 bits (103), Expect = 2e-04 Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Frame = -2 Query: 459 DVGQIRPGQDV--TITTEDGKS--FTCILRFDTEVELAYYNHGGILPYVIRNM 313 D+ ++PG V T+T DG C R DT EL YY + GIL YVIRNM Sbjct: 836 DLQNLQPGATVPVTLTRADGSQEVVPCRCRIDTATELTYYQNDGILHYVIRNM 888
>ACON_STAES (Q8CPC2) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 901 Score = 43.5 bits (101), Expect = 3e-04 Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 2/41 (4%) Frame = -2 Query: 432 DVTITTEDGK--SFTCILRFDTEVELAYYNHGGILPYVIRN 316 +VT E+G+ +F I+RFD+ VEL YY HGGIL V+RN Sbjct: 857 NVTAKKENGEIINFKAIVRFDSLVELDYYRHGGILQMVLRN 897
>ACON_STAEQ (Q5HPJ0) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 901 Score = 43.5 bits (101), Expect = 3e-04 Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 2/41 (4%) Frame = -2 Query: 432 DVTITTEDGK--SFTCILRFDTEVELAYYNHGGILPYVIRN 316 +VT E+G+ +F I+RFD+ VEL YY HGGIL V+RN Sbjct: 857 NVTAKKENGEIINFKAIVRFDSLVELDYYRHGGILQMVLRN 897
>ACON_COREF (Q8FTA8) Aconitate hydratase (EC 4.2.1.3)| Length = 937 Score = 43.1 bits (100), Expect = 4e-04 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Frame = -2 Query: 429 VTITTEDGKS--FTCILRFDTEVELAYYNHGGILPYVIRNMAGA 304 VT T E+G+ F ++R DT E Y+ HGGIL YV+R MA + Sbjct: 894 VTATKENGEKVEFDAVVRIDTPGEADYFRHGGILQYVLRQMAAS 937
>IREB2_RAT (Q62751) Iron-responsive element-binding protein 2 (IRE-BP 2) (Iron| regulatory protein 2) (IRP2) Length = 963 Score = 42.7 bits (99), Expect = 5e-04 Identities = 18/44 (40%), Positives = 27/44 (61%) Frame = -2 Query: 450 QIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYVIR 319 ++ PG + I T GK F+ I F+ +VE+ Y HGG+L +V R Sbjct: 917 ELFPGITLNIKTSTGKEFSVIAAFENDVEITLYKHGGLLNFVAR 960
>IREB2_HUMAN (P48200) Iron-responsive element-binding protein 2 (IRE-BP 2) (Iron| regulatory protein 2) (IRP2) Length = 963 Score = 42.7 bits (99), Expect = 5e-04 Identities = 18/47 (38%), Positives = 28/47 (59%) Frame = -2 Query: 450 QIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYVIRNMA 310 ++ PG + I T GK F+ I F+ +VE+ Y HGG+L +V R + Sbjct: 917 ELSPGITLNIQTSTGKVFSVIASFEDDVEITLYKHGGLLNFVARKFS 963
>ACON_CORDI (Q6NH63) Aconitate hydratase (EC 4.2.1.3)| Length = 934 Score = 42.4 bits (98), Expect = 6e-04 Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Frame = -2 Query: 429 VTITTEDGKS--FTCILRFDTEVELAYYNHGGILPYVIRNMAGA 304 VT T E G F ++R DT E YY +GGIL YV+RNM A Sbjct: 891 VTATKESGDQVEFDAVVRIDTPGEADYYRNGGILQYVLRNMINA 934
>ACON_STRMU (Q59938) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 888 Score = 41.2 bits (95), Expect = 0.001 Identities = 18/38 (47%), Positives = 27/38 (71%), Gaps = 1/38 (2%) Frame = -2 Query: 429 VTITTEDG-KSFTCILRFDTEVELAYYNHGGILPYVIR 319 V T+++G K F +LRFD + ++ YY +GGILP V+R Sbjct: 845 VKATSKEGTKEFQVLLRFDADADIRYYQNGGILPMVVR 882
>IREB2_MOUSE (Q811J3) Iron-responsive element-binding protein 2 (IRE-BP 2) (Iron| regulatory protein 2) (IRP2) Length = 963 Score = 41.2 bits (95), Expect = 0.001 Identities = 18/44 (40%), Positives = 26/44 (59%) Frame = -2 Query: 450 QIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYVIR 319 ++ PG + I T GK F+ I F +VE+ Y HGG+L +V R Sbjct: 917 ELFPGITLNIKTSTGKEFSVIASFANDVEITLYKHGGLLNFVAR 960
>ACON_STAAW (P63434) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 901 Score = 40.8 bits (94), Expect = 0.002 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%) Frame = -2 Query: 429 VTITTEDGK--SFTCILRFDTEVELAYYNHGGILPYVIRN 316 VT +DG F ++RFD+ VE+ YY HGGIL V+RN Sbjct: 858 VTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQMVLRN 897
>ACON_STAAS (Q6G9K9) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 901 Score = 40.8 bits (94), Expect = 0.002 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%) Frame = -2 Query: 429 VTITTEDGK--SFTCILRFDTEVELAYYNHGGILPYVIRN 316 VT +DG F ++RFD+ VE+ YY HGGIL V+RN Sbjct: 858 VTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQMVLRN 897
>ACON_STAAR (Q6GH55) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 901 Score = 40.8 bits (94), Expect = 0.002 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%) Frame = -2 Query: 429 VTITTEDGK--SFTCILRFDTEVELAYYNHGGILPYVIRN 316 VT +DG F ++RFD+ VE+ YY HGGIL V+RN Sbjct: 858 VTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQMVLRN 897
>ACON_STAAN (P99148) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 901 Score = 40.8 bits (94), Expect = 0.002 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%) Frame = -2 Query: 429 VTITTEDGK--SFTCILRFDTEVELAYYNHGGILPYVIRN 316 VT +DG F ++RFD+ VE+ YY HGGIL V+RN Sbjct: 858 VTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQMVLRN 897
>ACON_STAAM (P63433) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 901 Score = 40.8 bits (94), Expect = 0.002 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%) Frame = -2 Query: 429 VTITTEDGK--SFTCILRFDTEVELAYYNHGGILPYVIRN 316 VT +DG F ++RFD+ VE+ YY HGGIL V+RN Sbjct: 858 VTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQMVLRN 897
>ACON_STAAC (Q5HG69) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 901 Score = 40.8 bits (94), Expect = 0.002 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%) Frame = -2 Query: 429 VTITTEDGK--SFTCILRFDTEVELAYYNHGGILPYVIRN 316 VT +DG F ++RFD+ VE+ YY HGGIL V+RN Sbjct: 858 VTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQMVLRN 897
>ACON_CORJK (Q4JVM4) Aconitate hydratase (EC 4.2.1.3)| Length = 936 Score = 40.0 bits (92), Expect = 0.003 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 2/41 (4%) Frame = -2 Query: 429 VTITTEDGKS--FTCILRFDTEVELAYYNHGGILPYVIRNM 313 VT T E+G+ F + R DT E YY +GGIL +V+RNM Sbjct: 892 VTATKENGEKIEFDAVTRIDTPGEADYYRNGGILQFVLRNM 932
>ACON_BRAJA (P70920) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 906 Score = 40.0 bits (92), Expect = 0.003 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 4/53 (7%) Frame = -2 Query: 456 VGQIRPGQDVT--ITTEDG--KSFTCILRFDTEVELAYYNHGGILPYVIRNMA 310 VG ++P Q +T I + DG + + + R DT EL YY +GGIL YV+R +A Sbjct: 853 VGDLKPRQKLTAEIVSGDGSLQRVSLLCRIDTLDELDYYRNGGILHYVLRKLA 905
>ACON_MYCAV (O08451) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 961 Score = 39.7 bits (91), Expect = 0.004 Identities = 17/33 (51%), Positives = 21/33 (63%) Frame = -2 Query: 411 DGKSFTCILRFDTEVELAYYNHGGILPYVIRNM 313 D F ++R DT E YY +GGIL YV+RNM Sbjct: 925 DAAEFDAVVRIDTPGEADYYRNGGILQYVLRNM 957
>ACON_LEGPH (P37032) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) (Major iron-containing protein) (MICP) (IP210) Length = 891 Score = 38.1 bits (87), Expect = 0.012 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 4/51 (7%) Frame = -2 Query: 450 QIRPGQDVTITTE----DGKSFTCILRFDTEVELAYYNHGGILPYVIRNMA 310 ++ PG V +T E D + + R DT EL YY +GGIL YV+R ++ Sbjct: 840 KLTPGAMVPVTIERQDGDIEKIETLCRIDTADELEYYKNGGILQYVLRKIS 890
>NCAP_PI1HC (P24304) Nucleoprotein (Protein N) (Nucleocapsid protein) (NP| protein) Length = 524 Score = 29.3 bits (64), Expect = 5.6 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 5/89 (5%) Frame = -2 Query: 471 NLPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPY-----VIRNMAG 307 NL D+ ++R D+ ++ FTCILR E A N+ + Y V++N A Sbjct: 288 NLRPDINKLRSLVDIYLSKGARAPFTCILRDPVHGEFAPGNYPALWSYAMGVAVVQNKA- 346 Query: 306 AQK*ANAATYPFRPRWRHGSLVSATVDIK 220 Q+ TY + G V+ D K Sbjct: 347 MQQYVTGRTYLDMEMFLLGQAVAKDADSK 375
>VPA_BP186 (P41064) Replication gene A protein (GpA)| Length = 694 Score = 29.3 bits (64), Expect = 5.6 Identities = 16/72 (22%), Positives = 30/72 (41%) Frame = +1 Query: 175 FIFGLFIRPQHNEQTLDVHGGTNKTAMPPSRSKRVCGRVRLFLSSCHVADYIGQDASMVV 354 F+ GL + + + + A P R + R+R F + C+ Y+G+ ++ Sbjct: 265 FLKGLDLEDEEGNRISLIEKYDGSVANPAIRRCELMARIRGFENICNELGYVGEFYTLTA 324 Query: 355 VGQLHLCVKAKY 390 + H KA Y Sbjct: 325 PSKYHATTKAGY 336
>CDK7_MOUSE (Q03147) Cell division protein kinase 7 (EC 2.7.11.22) (EC| 2.7.11.23) (CDK-activating kinase) (CAK) (TFIIH basal transcription factor complex kinase subunit) (39 kDa protein kinase) (P39 Mo15) (Protein-tyrosine kinase MPK-7) (CR4 protein kinas Length = 346 Score = 28.9 bits (63), Expect = 7.3 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 6/36 (16%) Frame = +2 Query: 83 EDLFKMNTCFITT------TKLPPSRPAPTPGMEMP 172 + LF N C TT TK +RP PTPG ++P Sbjct: 273 QGLFLFNPCTRTTASQALKTKYFSNRPGPTPGCQLP 308
>RGS6_CAEEL (Q18563) Regulator of G-protein signaling rgs-6| Length = 737 Score = 28.9 bits (63), Expect = 7.3 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = +1 Query: 88 FVQNEHMFHNHNQTPPKSTCAHARHGNASFIFGLFIRPQHNEQTLD 225 F+ F N TP K C ARH S G +RP ++ TLD Sbjct: 329 FLPANFSFKNPASTPTKLVCIRARH---SLSTGAVLRPLLHKYTLD 371
>CH60_DROME (O02649) 60 kDa heat shock protein, mitochondrial precursor (Hsp60)| (60 kDa chaperonin) (CPN60) (Heat shock protein 60) (HSP-60) (Mitochondrial matrix protein P1) Length = 573 Score = 28.9 bits (63), Expect = 7.3 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = -2 Query: 438 GQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYVIRNMAGAQ 301 G+D IT +DGK+ T L +E ++ G I PY I + GA+ Sbjct: 190 GRDGVITVKDGKTLTDELEV---IEGMKFDRGYISPYFINSSKGAK 232
>GLT1_SCHPO (Q9C102) Putative glutamate synthase [NADPH] (EC 1.4.1.13)| (NADPH-GOGAT) Length = 2111 Score = 28.5 bits (62), Expect = 9.6 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Frame = -3 Query: 314 WQELRNRRTRPHTLFDLDGGMAVLL--VPPWTSRVCSLCCGLMNKPKIKL-AFPCLAWAQ 144 +++ R R FD D A+ + V PWT V C G M+ I + + LA A Sbjct: 906 YEQTRRCTLRGMLDFDFDSSQAIPIEQVEPWTEIVRRFCTGAMSYGSISMESHSSLAIAM 965 Query: 143 VDLGG 129 LGG Sbjct: 966 NRLGG 970
>AP1M_DISOM (P47795) AP-1 complex subunit mu (Clathrin coat assembly protein| AP47 homolog) (Clathrin coat-associated protein AP47 homolog) (Golgi adaptor AP-1 47 kDa protein homolog) (HA1 47 kDa subunit homolog) (Clathrin assembly protein assembly protein Length = 418 Score = 28.5 bits (62), Expect = 9.6 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -3 Query: 281 HTLFDLDGGMAVLLVPPWTSRVCSLCCGLMNKPKIKLAFP 162 H+LF ++GG AV L W S V C + + ++K P Sbjct: 3 HSLFLMNGGGAVFLEKHWRSVVSRSVCAYLLEAQLKAGQP 42 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,068,340 Number of Sequences: 219361 Number of extensions: 1827213 Number of successful extensions: 5222 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 5035 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5218 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
