Clone Name	rbastl30f07
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY109155.1| Zea mays PCO096202 mRNA sequence	113	5e-22
2	emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4,...	94	5e-16
3	emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4,...	94	5e-16
4	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	94	5e-16
5	dbj|AK101840.1| Oryza sativa (japonica cultivar-group) cDNA clon...	94	5e-16
6	dbj|AK067306.1| Oryza sativa (japonica cultivar-group) cDNA clon...	94	5e-16
7	ref|XM_473109.1| Oryza sativa (japonica cultivar-group), predic...	84	4e-13
8	ref|NM_179666.2| Arabidopsis thaliana unknown protein AT2G20190 ...	64	4e-07
9	gb|AY091025.1| Arabidopsis thaliana unknown protein (At2g20190) ...	64	4e-07
10	gb|AC006081.4| Arabidopsis thaliana chromosome 2 clone T2G17 map...	64	4e-07
11	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	54	4e-04
12	dbj|AP004097.3| Oryza sativa (japonica cultivar-group) genomic D...	54	4e-04
13	dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic D...	54	4e-04
14	dbj|AK120120.1| Oryza sativa (japonica cultivar-group) cDNA clon...	54	4e-04
15	dbj|AK067382.1| Oryza sativa (japonica cultivar-group) cDNA clon...	54	4e-04
16	gb|AC012602.4| Homo sapiens chromosome 5 clone CTC-328N13, compl...	44	0.39
17	gb|AC008970.4|AC008970 Homo sapiens chromosome 5 clone CTD-2374C...	44	0.39
18	emb|BX511038.6| Zebrafish DNA sequence from clone CH211-168I8 in...	44	0.39
19	emb|AL353746.6| Human DNA sequence from clone RP11-438B23 on chr...	42	1.5
20	emb|BX545918.4| Zebrafish DNA sequence from clone DKEYP-22F11 in...	42	1.5
21	gb|AC161809.3| Mus musculus chromosome 1, clone RP23-114N13, com...	40	6.0
22	emb|CR388054.11| Zebrafish DNA sequence from clone CH211-82E18 i...	40	6.0
23	gb|AC126682.3| Mus musculus BAC clone RP23-8E3 from 15, complete...	40	6.0
24	emb|AL845439.5| Human DNA sequence from clone DAQB-215D11 on chr...	40	6.0
25	emb|BX088647.3| Human DNA sequence from clone DASS-90B3 on chrom...	40	6.0
26	emb|AL671859.3| Human DNA sequence from clone XXbac-218N7 on chr...	40	6.0
27	emb|AL669914.2| Human DNA sequence from clone XXbac-250I8 on chr...	40	6.0
28	emb|AL513264.8| Human DNA sequence from clone RP11-480H3 on chro...	40	6.0
29	emb|BX927229.6| Human DNA sequence from clone DAMA-377D17 on chr...	40	6.0
30	emb|AL954189.5| Mouse DNA sequence from clone RP23-405M24 on chr...	40	6.0
31	emb|CR759960.3| Human DNA sequence from clone DAAP-65D20 on chro...	40	6.0
32	emb|CR759763.2| Human DNA sequence from clone DAMC-182C13 on chr...	40	6.0
33	dbj|AB210196.1| Pan troglodytes ZNRD1, PPP1R11, RNF genes for zi...	40	6.0
34	dbj|AB210195.1| Pan troglodytes ZNRD1, PPP1R11, RNF39 genes for ...	40	6.0
35	dbj|AB202082.1| Homo sapiens ZNRD1, PPP1R11, RNF39 genes for zin...	40	6.0
36	gb|CP000264.1| Jannaschia sp. CCS1, complete genome	40	6.0
37	emb|BX284697.8| Zebrafish DNA sequence from clone DKEY-7M11 in l...	40	6.0
38	gb|AC092248.1|AC092248 Drosophila melanogaster, chromosome 2L, r...	40	6.0
39	gb|AC092227.1|AC092227 Drosophila melanogaster, chromosome 2L, r...	40	6.0
40	gb|AC152932.2| Xenopus tropicalis clone ISB1-31M3, complete sequ...	40	6.0
41	gb|AC010420.11| Homo sapiens chromosome 5 clone CTD-2187J20, com...	40	6.0
42	gb|AC154530.2| Mus musculus BAC clone RP23-467F17 from chromosom...	40	6.0
43	dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA...	40	6.0
44	dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility co...	40	6.0
45	emb|BX005350.6| Zebrafish DNA sequence from clone DKEY-58C8 in l...	40	6.0
46	emb|AL954868.6| Zebrafish DNA sequence from clone CH211-254N4 in...	40	6.0
47	emb|CT025756.17| Zebrafish DNA sequence from clone CH211-81M17 i...	40	6.0
48	gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52...	40	6.0
49	emb|CR942385.2| Xenopus tropicalis finished cDNA, clone TGas136l07	40	6.0
50	dbj|AB088087.1| Homo sapiens HCGVII, HTEX4,HTEX6A, HCGV, HZFW1, ...	40	6.0
51	gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ...	40	6.0
52	gb|U53588.1|HSU53588 Homo sapiens MHC class 1 region	40	6.0
53	gb|AC004201.1|AC004201 Homo sapiens clone UWGC:y2c163 from 6p21,...	40	6.0
54	emb|BX000479.11| Mouse DNA sequence from clone RP23-139I16 on ch...	40	6.0
55	dbj|AB023055.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA...	40	6.0
56	dbj|AB023054.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA...	40	6.0

---

>gb|AY109155.1| Zea mays PCO096202 mRNA sequence
          Length = 547

 Score =  113 bits (57), Expect = 5e-22
 Identities = 117/137 (85%)
 Strand = Plus / Minus

                                                                       
Query: 310 cctcattggttagcgtcgatcgccgtgccggaccttgcctgcgagatccggttcgcgtag 369
           |||||||||||||  ||||| | | |||||||||| ||||| || |||||||| ||||||
Sbjct: 193 cctcattggttagaatcgattggcttgccggacctcgcctgtgaaatccggttagcgtag 134

                                                                       
Query: 370 atggtcaccagccgcagctgcgtgctgctcagcccttccaggtacgggacaaatgatttc 429
           ||||| || || || |||||||||||||| |||||||||| ||| ||  |||||| ||||
Sbjct: 133 atggttactaggcggagctgcgtgctgctaagcccttccaagtatggagcaaatgctttc 74

                            
Query: 430 ccgagcatgatgtagat 446
           || ||||||||||||||
Sbjct: 73  ccaagcatgatgtagat 57

---

>emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002J11,
              complete sequence
          Length = 143582

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 113/135 (83%)
 Strand = Plus / Plus

                                                                          
Query: 312    tcattggttagcgtcgatcgccgtgccggaccttgcctgcgagatccggttcgcgtagat 371
              |||||||||||| || ||||  | ||| |||||||| || || |||||||| ||||||||
Sbjct: 107522 tcattggttagcatcaatcggagcgccagaccttgcttgtgaaatccggtttgcgtagat 107581

                                                                          
Query: 372    ggtcaccagccgcagctgcgtgctgctcagcccttccaggtacgggacaaatgatttccc 431
               || || || ||||||||||||||| | ||||||||||  |||||||| ||||  |||||
Sbjct: 107582 agttacaaggcgcagctgcgtgctgttaagcccttccaaatacgggacgaatgccttccc 107641

                             
Query: 432    gagcatgatgtagat 446
               ||||||||||||||
Sbjct: 107642 aagcatgatgtagat 107656

---

>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24,
             complete sequence
          Length = 164577

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 113/135 (83%)
 Strand = Plus / Plus

                                                                         
Query: 312   tcattggttagcgtcgatcgccgtgccggaccttgcctgcgagatccggttcgcgtagat 371
             |||||||||||| || ||||  | ||| |||||||| || || |||||||| ||||||||
Sbjct: 50142 tcattggttagcatcaatcggagcgccagaccttgcttgtgaaatccggtttgcgtagat 50201

                                                                         
Query: 372   ggtcaccagccgcagctgcgtgctgctcagcccttccaggtacgggacaaatgatttccc 431
              || || || ||||||||||||||| | ||||||||||  |||||||| ||||  |||||
Sbjct: 50202 agttacaaggcgcagctgcgtgctgttaagcccttccaaatacgggacgaatgccttccc 50261

                            
Query: 432   gagcatgatgtagat 446
              ||||||||||||||
Sbjct: 50262 aagcatgatgtagat 50276

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 113/135 (83%)
 Strand = Plus / Plus

                                                                            
Query: 312      tcattggttagcgtcgatcgccgtgccggaccttgcctgcgagatccggttcgcgtagat 371
                |||||||||||| || ||||  | ||| |||||||| || || |||||||| ||||||||
Sbjct: 25323583 tcattggttagcatcaatcggagcgccagaccttgcttgtgaaatccggtttgcgtagat 25323642

                                                                            
Query: 372      ggtcaccagccgcagctgcgtgctgctcagcccttccaggtacgggacaaatgatttccc 431
                 || || || ||||||||||||||| | ||||||||||  |||||||| ||||  |||||
Sbjct: 25323643 agttacaaggcgcagctgcgtgctgttaagcccttccaaatacgggacgaatgccttccc 25323702

                               
Query: 432      gagcatgatgtagat 446
                 ||||||||||||||
Sbjct: 25323703 aagcatgatgtagat 25323717

---

>dbj|AK101840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069D24, full
           insert sequence
          Length = 643

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 113/135 (83%)
 Strand = Plus / Minus

                                                                       
Query: 312 tcattggttagcgtcgatcgccgtgccggaccttgcctgcgagatccggttcgcgtagat 371
           |||||||||||| || ||||  | ||| |||||||| || || |||||||| ||||||||
Sbjct: 290 tcattggttagcatcaatcggagcgccagaccttgcttgtgaaatccggtttgcgtagat 231

                                                                       
Query: 372 ggtcaccagccgcagctgcgtgctgctcagcccttccaggtacgggacaaatgatttccc 431
            || || || ||||||||||||||| | ||||||||||  |||||||| ||||  |||||
Sbjct: 230 agttacaaggcgcagctgcgtgctgttaagcccttccaaatacgggacgaatgccttccc 171

                          
Query: 432 gagcatgatgtagat 446
            ||||||||||||||
Sbjct: 170 aagcatgatgtagat 156

---

>dbj|AK067306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100C22, full
            insert sequence
          Length = 5032

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 113/135 (83%)
 Strand = Plus / Minus

                                                                        
Query: 312  tcattggttagcgtcgatcgccgtgccggaccttgcctgcgagatccggttcgcgtagat 371
            |||||||||||| || ||||  | ||| |||||||| || || |||||||| ||||||||
Sbjct: 4634 tcattggttagcatcaatcggagcgccagaccttgcttgtgaaatccggtttgcgtagat 4575

                                                                        
Query: 372  ggtcaccagccgcagctgcgtgctgctcagcccttccaggtacgggacaaatgatttccc 431
             || || || ||||||||||||||| | ||||||||||  |||||||| ||||  |||||
Sbjct: 4574 agttacaaggcgcagctgcgtgctgttaagcccttccaaatacgggacgaatgccttccc 4515

                           
Query: 432  gagcatgatgtagat 446
             ||||||||||||||
Sbjct: 4514 aagcatgatgtagat 4500

---

>ref|XM_473109.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 4233

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 90/106 (84%)
 Strand = Plus / Minus

                                                                        
Query: 341  accttgcctgcgagatccggttcgcgtagatggtcaccagccgcagctgcgtgctgctca 400
            ||||||| || || |||||||| |||||||| || || || ||||||||||||||| | |
Sbjct: 4171 accttgcttgtgaaatccggtttgcgtagatagttacaaggcgcagctgcgtgctgttaa 4112

                                                          
Query: 401  gcccttccaggtacgggacaaatgatttcccgagcatgatgtagat 446
            |||||||||  |||||||| ||||  ||||| ||||||||||||||
Sbjct: 4111 gcccttccaaatacgggacgaatgccttcccaagcatgatgtagat 4066

---

>ref|NM_179666.2| Arabidopsis thaliana unknown protein AT2G20190 mRNA, complete cds
          Length = 4779

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                        
Query: 346  gcctgcgagatccggttcgcgtagatggtcaccagccgcagctgcgtgctgctcagccct 405
            ||||||||||||||||| || ||||||||||| || || | |||||||||| | || |||
Sbjct: 4482 gcctgcgagatccggtttgcatagatggtcactagacgaacctgcgtgctgtttagacct 4423

                                            
Query: 406  tccaggtacgggacaaatgatttcccgagcat 437
            ||||  ||||| | ||||| |||||| |||||
Sbjct: 4422 tccaaatacggcaaaaatgctttcccaagcat 4391

---

>gb|AY091025.1| Arabidopsis thaliana unknown protein (At2g20190) mRNA, complete cds
          Length = 4806

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                        
Query: 346  gcctgcgagatccggttcgcgtagatggtcaccagccgcagctgcgtgctgctcagccct 405
            ||||||||||||||||| || ||||||||||| || || | |||||||||| | || |||
Sbjct: 4481 gcctgcgagatccggtttgcatagatggtcactagacgaacctgcgtgctgtttagacct 4422

                                            
Query: 406  tccaggtacgggacaaatgatttcccgagcat 437
            ||||  ||||| | ||||| |||||| |||||
Sbjct: 4421 tccaaatacggcaaaaatgctttcccaagcat 4390

---

>gb|AC006081.4| Arabidopsis thaliana chromosome 2 clone T2G17 map mi148, complete
            sequence
          Length = 97814

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                        
Query: 346  gcctgcgagatccggttcgcgtagatggtcaccagccgcagctgcgtgctgctcagccct 405
            ||||||||||||||||| || ||||||||||| || || | |||||||||| | || |||
Sbjct: 6836 gcctgcgagatccggtttgcatagatggtcactagacgaacctgcgtgctgtttagacct 6777

                                            
Query: 406  tccaggtacgggacaaatgatttcccgagcat 437
            ||||  ||||| | ||||| |||||| |||||
Sbjct: 6776 tccaaatacggcaaaaatgctttcccaagcat 6745

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 87/107 (81%)
 Strand = Plus / Plus

                                                                            
Query: 340      gaccttgcctgcgagatccggttcgcgtagatggtcaccagccgcagctgcgtgctgctc 399
                ||||||||||| || |||| ||| || ||||| || || || ||||||||||||||  | 
Sbjct: 24508536 gaccttgcctgtgatatcctgtttgcatagattgttactaggcgcagctgcgtgctatta 24508595

                                                               
Query: 400      agcccttccaggtacgggacaaatgatttcccgagcatgatgtagat 446
                ||||| || || || || ||||||| |||||| ||||| ||||||||
Sbjct: 24508596 agcccctctagatatggtacaaatgctttcccaagcataatgtagat 24508642

---

>dbj|AP004097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1792_D02
          Length = 141649

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 87/107 (81%)
 Strand = Plus / Plus

                                                                          
Query: 340    gaccttgcctgcgagatccggttcgcgtagatggtcaccagccgcagctgcgtgctgctc 399
              ||||||||||| || |||| ||| || ||||| || || || ||||||||||||||  | 
Sbjct: 136742 gaccttgcctgtgatatcctgtttgcatagattgttactaggcgcagctgcgtgctatta 136801

                                                             
Query: 400    agcccttccaggtacgggacaaatgatttcccgagcatgatgtagat 446
              ||||| || || || || ||||||| |||||| ||||| ||||||||
Sbjct: 136802 agcccctctagatatggtacaaatgctttcccaagcataatgtagat 136848

---

>dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1014_H03
          Length = 132696

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 87/107 (81%)
 Strand = Plus / Plus

                                                                         
Query: 340   gaccttgcctgcgagatccggttcgcgtagatggtcaccagccgcagctgcgtgctgctc 399
             ||||||||||| || |||| ||| || ||||| || || || ||||||||||||||  | 
Sbjct: 22637 gaccttgcctgtgatatcctgtttgcatagattgttactaggcgcagctgcgtgctatta 22696

                                                            
Query: 400   agcccttccaggtacgggacaaatgatttcccgagcatgatgtagat 446
             ||||| || || || || ||||||| |||||| ||||| ||||||||
Sbjct: 22697 agcccctctagatatggtacaaatgctttcccaagcataatgtagat 22743

---

>dbj|AK120120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025O20, full
            insert sequence
          Length = 4796

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 87/107 (81%)
 Strand = Plus / Minus

                                                                        
Query: 340  gaccttgcctgcgagatccggttcgcgtagatggtcaccagccgcagctgcgtgctgctc 399
            ||||||||||| || |||| ||| || ||||| || || || ||||||||||||||  | 
Sbjct: 4423 gaccttgcctgtgatatcctgtttgcatagattgttactaggcgcagctgcgtgctatta 4364

                                                           
Query: 400  agcccttccaggtacgggacaaatgatttcccgagcatgatgtagat 446
            ||||| || || || || ||||||| |||||| ||||| ||||||||
Sbjct: 4363 agcccctctagatatggtacaaatgctttcccaagcataatgtagat 4317

---

>dbj|AK067382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102B13, full
            insert sequence
          Length = 4538

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 87/107 (81%)
 Strand = Plus / Minus

                                                                        
Query: 340  gaccttgcctgcgagatccggttcgcgtagatggtcaccagccgcagctgcgtgctgctc 399
            ||||||||||| || |||| ||| || ||||| || || || ||||||||||||||  | 
Sbjct: 4168 gaccttgcctgtgatatcctgtttgcatagattgttactaggcgcagctgcgtgctatta 4109

                                                           
Query: 400  agcccttccaggtacgggacaaatgatttcccgagcatgatgtagat 446
            ||||| || || || || ||||||| |||||| ||||| ||||||||
Sbjct: 4108 agcccctctagatatggtacaaatgctttcccaagcataatgtagat 4062

---

>gb|AC012602.4| Homo sapiens chromosome 5 clone CTC-328N13, complete sequence
          Length = 90963

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 283   atataaaacacaatgagaaatg 304
             ||||||||||||||||||||||
Sbjct: 78432 atataaaacacaatgagaaatg 78453

---

>gb|AC008970.4|AC008970 Homo sapiens chromosome 5 clone CTD-2374C24, complete sequence
          Length = 119119

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 283   atataaaacacaatgagaaatg 304
             ||||||||||||||||||||||
Sbjct: 66498 atataaaacacaatgagaaatg 66519

---

>emb|BX511038.6| Zebrafish DNA sequence from clone CH211-168I8 in linkage group 4,
             complete sequence
          Length = 58637

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 283   atataaaacacaatgagaaatg 304
             ||||||||||||||||||||||
Sbjct: 56252 atataaaacacaatgagaaatg 56231

---

>emb|AL353746.6| Human DNA sequence from clone RP11-438B23 on chromosome 9 Contains the
             3' end of a novel gene (FLJ31810), complete sequence
          Length = 177851

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 161   ataatcacacaaagaaccaaa 181
             |||||||||||||||||||||
Sbjct: 32719 ataatcacacaaagaaccaaa 32739

---

>emb|BX545918.4| Zebrafish DNA sequence from clone DKEYP-22F11 in linkage group 8,
              complete sequence
          Length = 149121

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 193    aagggaattgtttgcttatat 213
              |||||||||||||||||||||
Sbjct: 103863 aagggaattgtttgcttatat 103843

---

>gb|AC161809.3| Mus musculus chromosome 1, clone RP23-114N13, complete sequence
          Length = 213778

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    aatacataataatcacacaa 172
              ||||||||||||||||||||
Sbjct: 193381 aatacataataatcacacaa 193400

---

>emb|CR388054.11| Zebrafish DNA sequence from clone CH211-82E18 in linkage group 1,
              complete sequence
          Length = 162569

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    tacacaaacctacacaaaca 237
              ||||||||||||||||||||
Sbjct: 106328 tacacaaacctacacaaaca 106309

---

>gb|AC126682.3| Mus musculus BAC clone RP23-8E3 from 15, complete sequence
          Length = 221352

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    acaaacctacacaaacaaac 240
              ||||||||||||||||||||
Sbjct: 162677 acaaacctacacaaacaaac 162658

---

>emb|AL845439.5| Human DNA sequence from clone DAQB-215D11 on chromosome 6 Contains 3'
             end of C6orf12 for chromosome 6 open reading frame 12,
             ETF1P1 for eukaryotic translation termination factor 1
             pseudogene 1, ZNRD1 for zinc ribbon domain containing, 1,
             PPP1R11 for protein phosphatase 1, regulatory (inhibitor)
             subunit 11, RNF39 for ring finger protein 39 and 3 CpG
             islands, complete sequence
          Length = 74764

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   acaaacctacacaaacaaac 240
             ||||||||||||||||||||
Sbjct: 52016 acaaacctacacaaacaaac 52035

---

>emb|BX088647.3| Human DNA sequence from clone DASS-90B3 on chromosome 6, complete
             sequence
          Length = 100183

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   acaaacctacacaaacaaac 240
             ||||||||||||||||||||
Sbjct: 70861 acaaacctacacaaacaaac 70880

---

>emb|AL671859.3| Human DNA sequence from clone XXbac-218N7 on chromosome 6 contains the
             5' end of the gene for HTEX4, 4.3 and 6, a eukaryotic
             translation termination factor 1 (ETF1) pseudogene, the
             ZNRD1 gene for zinc ribbon domain containing 1, the
             PPP1R11 gene for protein phosphatase 1, regulatory
             (inhibitor) subunit 11, the HZFW1 gene for HZFW1 protein,
             the TRIM31, TRIM40 and TRIM10 genes for tripartite
             motif-containing 31,40 and 10 and four CpG islands,
             complete sequence
          Length = 144169

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   acaaacctacacaaacaaac 240
             ||||||||||||||||||||
Sbjct: 56838 acaaacctacacaaacaaac 56857

---

>emb|AL669914.2| Human DNA sequence from clone XXbac-250I8 on chromosome 6 contains a
             major histocompatibility complex, class I, J pseudogene,
             the gene for HCGVIII protein, the genes for HTEX4, 4.3 and
             6, a eukaryotic translation termination factor 1 (ETF1)
             pseudogene, the ZNRD1 gene for zinc ribbon domain
             containing, 1 , the PPP1R11 gene for protein phosphatase
             1, regulatory (inhibitor) subunit 11, the HZFW1 gene for
             HZFW1 protein, the TRIM31 gene for tripartite motif
             containing 31, the TRIM40 gene for tripartite
             morif-containing 40, the TRIM10 gene for  tripartite motif
             containing 10, the 5' end of the TRIM15 gene for
             tripartite motif-containing 15 and five CpG islands,
             complete sequence
          Length = 159178

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   acaaacctacacaaacaaac 240
             ||||||||||||||||||||
Sbjct: 71874 acaaacctacacaaacaaac 71893

---

>emb|AL513264.8| Human DNA sequence from clone RP11-480H3 on chromosome 6, complete
             sequence
          Length = 90015

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   aaatgtccatataaaacaca 294
             ||||||||||||||||||||
Sbjct: 89125 aaatgtccatataaaacaca 89144

---

>emb|BX927229.6| Human DNA sequence from clone DAMA-377D17 on chromosome 6, complete
              sequence
          Length = 112627

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    acaaacctacacaaacaaac 240
              ||||||||||||||||||||
Sbjct: 108519 acaaacctacacaaacaaac 108538

---

>emb|AL954189.5| Mouse DNA sequence from clone RP23-405M24 on chromosome 4 Contains the 5'
              end of the Ptprd gene for receptor type protein tyrosine
              phosphatase D, complete sequence
          Length = 172364

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    cataataatcacacaaagaa 176
              ||||||||||||||||||||
Sbjct: 135770 cataataatcacacaaagaa 135751

---

>emb|CR759960.3| Human DNA sequence from clone DAAP-65D20 on chromosome 6, complete
             sequence
          Length = 97107

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   acaaacctacacaaacaaac 240
             ||||||||||||||||||||
Sbjct: 74405 acaaacctacacaaacaaac 74424

---

>emb|CR759763.2| Human DNA sequence from clone DAMC-182C13 on chromosome 6, complete
             sequence
          Length = 110503

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   acaaacctacacaaacaaac 240
             ||||||||||||||||||||
Sbjct: 96624 acaaacctacacaaacaaac 96643

---

>dbj|AB210196.1| Pan troglodytes ZNRD1, PPP1R11, RNF genes for zinc ribbon domain
             containing, 1, protein phosphatase 1, regulatory
             (inhibitor) subunit 11 isoform 1, HZFw1 protein isoform 1,
             complete cds, HTEX4 gene, exon 1, 2, 3, 4, cell_line:
             Ericka
          Length = 46836

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   acaaacctacacaaacaaac 240
             ||||||||||||||||||||
Sbjct: 46794 acaaacctacacaaacaaac 46813

---

>dbj|AB210195.1| Pan troglodytes ZNRD1, PPP1R11, RNF39 genes for zinc ribbon domain
             containing, 1, protein phosphatase 1, regulatory
             (inhibitor) subunit 11 isoform 1, HZFw1 protein isoform 1,
             complete cds, HTEX4 gene, exon 1, 2, 3, 4, cell_line:
             Borie
          Length = 46836

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   acaaacctacacaaacaaac 240
             ||||||||||||||||||||
Sbjct: 46794 acaaacctacacaaacaaac 46813

---

>dbj|AB202082.1| Homo sapiens ZNRD1, PPP1R11, RNF39 genes for zinc ribbon domain
             containing, 1, protein phosphatase 1, regulatory
             (inhibitor) subunit 11, ring finger protein 39, complete
             cds
          Length = 45907

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   acaaacctacacaaacaaac 240
             ||||||||||||||||||||
Sbjct: 45865 acaaacctacacaaacaaac 45884

---

>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    gatcgccgtgccggaccttg 346
              ||||||||||||||||||||
Sbjct: 103284 gatcgccgtgccggaccttg 103265

---

>emb|BX284697.8| Zebrafish DNA sequence from clone DKEY-7M11 in linkage group 1, complete
              sequence
          Length = 209946

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    tacacaaacctacacaaaca 237
              ||||||||||||||||||||
Sbjct: 145001 tacacaaacctacacaaaca 145020

---

>gb|AC092248.1|AC092248 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone
           BACR37K07, complete sequence
          Length = 157722

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 204 ttgcttatatactatacaca 223
           ||||||||||||||||||||
Sbjct: 875 ttgcttatatactatacaca 856

---

>gb|AC092227.1|AC092227 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone
             BACR20P10, complete sequence
          Length = 157482

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   ttgcttatatactatacaca 223
             ||||||||||||||||||||
Sbjct: 51272 ttgcttatatactatacaca 51291

---

>gb|AC152932.2| Xenopus tropicalis clone ISB1-31M3, complete sequence
          Length = 78419

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   ataaaacacaatgagaaatg 304
             ||||||||||||||||||||
Sbjct: 17349 ataaaacacaatgagaaatg 17368

---

>gb|AC010420.11| Homo sapiens chromosome 5 clone CTD-2187J20, complete sequence
          Length = 88736

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   acaagggaattgtttgctta 210
             ||||||||||||||||||||
Sbjct: 33099 acaagggaattgtttgctta 33080

---

>gb|AC154530.2| Mus musculus BAC clone RP23-467F17 from chromosome 16, complete
             sequence
          Length = 179995

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   ttgtttgcttatatactata 219
             ||||||||||||||||||||
Sbjct: 32899 ttgtttgcttatatactata 32918

---

>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region
          Length = 2229817

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 221     acaaacctacacaaacaaac 240
               ||||||||||||||||||||
Sbjct: 1864926 acaaacctacacaaacaaac 1864907

---

>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region
          Length = 1750601

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 221     acaaacctacacaaacaaac 240
               ||||||||||||||||||||
Sbjct: 1407084 acaaacctacacaaacaaac 1407065

---

>emb|BX005350.6| Zebrafish DNA sequence from clone DKEY-58C8 in linkage group 1,
             complete sequence
          Length = 195436

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   tacacaaacctacacaaaca 237
             ||||||||||||||||||||
Sbjct: 96114 tacacaaacctacacaaaca 96133

---

>emb|AL954868.6| Zebrafish DNA sequence from clone CH211-254N4 in linkage group 8,
              complete sequence
          Length = 194224

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    aagggaattgtttgcttata 212
              ||||||||||||||||||||
Sbjct: 136398 aagggaattgtttgcttata 136417

---

>emb|CT025756.17| Zebrafish DNA sequence from clone CH211-81M17 in linkage group 22,
              complete sequence
          Length = 162828

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 273    caaaatgtccatataaaacacaat 296
              |||||||||||||||||| |||||
Sbjct: 118469 caaaatgtccatataaaaaacaat 118492

---

>gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52 of 83 of the
            complete sequence
          Length = 236144

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  ttgcttatatactatacaca 223
            ||||||||||||||||||||
Sbjct: 8218 ttgcttatatactatacaca 8199

---

>emb|CR942385.2| Xenopus tropicalis finished cDNA, clone TGas136l07
          Length = 2242

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 417 gacaaatgatttcccgagcatgat 440
           |||||||||||||| |||||||||
Sbjct: 187 gacaaatgatttccagagcatgat 164

---

>dbj|AB088087.1| Homo sapiens HCGVII, HTEX4,HTEX6A, HCGV, HZFW1, HZFC2 genes
          Length = 45882

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   acaaacctacacaaacaaac 240
             ||||||||||||||||||||
Sbjct: 45840 acaaacctacacaaacaaac 45859

---

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    gatcgccgtgccggaccttg 346
              ||||||||||||||||||||
Sbjct: 778381 gatcgccgtgccggaccttg 778362

---

>gb|U53588.1|HSU53588 Homo sapiens MHC class 1 region
          Length = 37160

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 221  acaaacctacacaaacaaac 240
            ||||||||||||||||||||
Sbjct: 1871 acaaacctacacaaacaaac 1852

---

>gb|AC004201.1|AC004201 Homo sapiens clone UWGC:y2c163 from 6p21, complete sequence
          Length = 43284

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   acaaacctacacaaacaaac 240
             ||||||||||||||||||||
Sbjct: 24624 acaaacctacacaaacaaac 24605

---

>emb|BX000479.11| Mouse DNA sequence from clone RP23-139I16 on chromosome X, complete
              sequence
          Length = 145084

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    caaaatgtccatataaaaca 292
              ||||||||||||||||||||
Sbjct: 124209 caaaatgtccatataaaaca 124228

---

>dbj|AB023055.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region,
              clone:904J21, complete sequence
          Length = 162383

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    acaaacctacacaaacaaac 240
              ||||||||||||||||||||
Sbjct: 158347 acaaacctacacaaacaaac 158328

---

>dbj|AB023054.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region,
              clone:679G22, complete sequence
          Length = 162383

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    acaaacctacacaaacaaac 240
              ||||||||||||||||||||
Sbjct: 158347 acaaacctacacaaacaaac 158328


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,615,199
Number of Sequences: 3902068
Number of extensions: 3615199
Number of successful extensions: 64349
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64139
Number of HSP's gapped (non-prelim): 210
length of query: 449
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 427
effective length of database: 17,147,199,772
effective search space: 7321854302644
effective search space used: 7321854302644
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---