ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl30f03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 41 ggtagattcatccattttactcc 63 ||||||||||||||||||||||| Sbjct: 18069093 ggtagattcatccattttactcc 18069115 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 aattttaaaaagatttaaat 93 |||||||||||||||||||| Sbjct: 24956917 aattttaaaaagatttaaat 24956936
>gb|AC022317.8| Homo sapiens BAC clone RP11-104A24 from 4, complete sequence Length = 175020 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Minus Query: 73 aaattttaaaaagatttaaattt 95 ||||||||||||||||||||||| Sbjct: 41656 aaattttaaaaagatttaaattt 41634
>dbj|AP005285.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F04 Length = 139563 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 41 ggtagattcatccattttactcc 63 ||||||||||||||||||||||| Sbjct: 130687 ggtagattcatccattttactcc 130709
>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome Length = 1767403 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 71 aaaaattttaaaaagatttaaat 93 ||||||||||||||||||||||| Sbjct: 1410974 aaaaattttaaaaagatttaaat 1410996
>gb|AC140415.3| Mus musculus BAC clone RP23-127A20 from 13, complete sequence Length = 221245 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Minus Query: 70 taaaaattttaaaaagatttaaa 92 ||||||||||||||||||||||| Sbjct: 101164 taaaaattttaaaaagatttaaa 101142
>gb|AC132910.8| Mus musculus chromosome 17, clone RP24-301I14, complete sequence Length = 209975 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Minus Query: 68 agtaaaaattttaaaaagatttaaatttag 97 ||||| |||||||||||||||| ||||||| Sbjct: 119589 agtaacaattttaaaaagattttaatttag 119560
>emb|AL445239.8| Human DNA sequence from clone RP11-540L11 on chromosome X Contains the 3' end of the CASK gene for calcium/calmodulin-dependent serine protein kinase (MAGUK family) and a novel gene, complete sequence Length = 75677 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 aaaaattttaaaaagatttaaa 92 |||||||||||||||||||||| Sbjct: 8069 aaaaattttaaaaagatttaaa 8048
>gb|AC090329.6| Homo sapiens chromosome 18, clone RP11-793M6, complete sequence Length = 141741 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 cctctagtaaaaattttaaaaa 84 |||||||||||||||||||||| Sbjct: 132117 cctctagtaaaaattttaaaaa 132138
>gb|AC044840.9| Homo sapiens chromosome , clone RP11-30L3, complete sequence Length = 179834 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 cctctagtaaaaattttaaaaa 84 |||||||||||||||||||||| Sbjct: 77769 cctctagtaaaaattttaaaaa 77790
>dbj|AB035878.1| Ceratovacuna longifila mitochondrial genes for small subunit rRNA, tRNA-Val, large subunit rRNA, partial and complete sequences Length = 1581 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 72 aaaattttaaaaagatttaaatttag 97 |||||||||||||||||||| ||||| Sbjct: 644 aaaattttaaaaagatttaattttag 669
>gb|AC073343.6| Homo sapiens BAC clone RP11-611L7 from 7, complete sequence Length = 173967 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 ggggggaagcacatggtagaag 243 |||||||||||||||||||||| Sbjct: 4159 ggggggaagcacatggtagaag 4138
>gb|AC122563.8| Mus musculus chromosome 1, clone RP24-208F6, complete sequence Length = 180825 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 taaaaattttaaaaagattta 90 ||||||||||||||||||||| Sbjct: 85775 taaaaattttaaaaagattta 85795
>ref|XM_629288.1| Dictyostelium discoideum hypothetical protein (DDB0219819), partial mRNA Length = 3165 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 gtaaaaattttaaaaagattt 89 ||||||||||||||||||||| Sbjct: 2747 gtaaaaattttaaaaagattt 2767
>gb|AC158121.12| Mus musculus chromosome 5, clone RP23-440H19, complete sequence Length = 202895 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 taaaaattttaaaaagattta 90 ||||||||||||||||||||| Sbjct: 49951 taaaaattttaaaaagattta 49931
>ref|XM_866369.1| PREDICTED: Bos taurus similar to Nedd-4-like E3 ubiquitin-protein ligase WWP2 (WW domain-containing protein 2) (Atropin-1 interacting protein 2) (AIP2), transcript variant 2 (LOC512457), mRNA Length = 5829 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 agtaaaaattttaaaaagatttaaa 92 |||||||||||||||||| |||||| Sbjct: 5454 agtaaaaattttaaaaaggtttaaa 5478
>ref|XM_878426.1| PREDICTED: Bos taurus similar to Nedd-4-like E3 ubiquitin-protein ligase WWP2 (WW domain-containing protein 2) (Atropin-1 interacting protein 2) (AIP2), transcript variant 4 (LOC512457), mRNA Length = 4673 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 agtaaaaattttaaaaagatttaaa 92 |||||||||||||||||| |||||| Sbjct: 4298 agtaaaaattttaaaaaggtttaaa 4322
>ref|XM_878386.1| PREDICTED: Bos taurus similar to Nedd-4-like E3 ubiquitin-protein ligase WWP2 (WW domain-containing protein 2) (Atropin-1 interacting protein 2) (AIP2), transcript variant 3 (LOC512457), mRNA Length = 5685 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 agtaaaaattttaaaaagatttaaa 92 |||||||||||||||||| |||||| Sbjct: 5310 agtaaaaattttaaaaaggtttaaa 5334
>ref|XM_589976.2| PREDICTED: Bos taurus similar to Nedd-4-like E3 ubiquitin-protein ligase WWP2 (WW domain-containing protein 2) (Atropin-1 interacting protein 2) (AIP2), transcript variant 1 (LOC512457), mRNA Length = 4065 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 agtaaaaattttaaaaagatttaaa 92 |||||||||||||||||| |||||| Sbjct: 3690 agtaaaaattttaaaaaggtttaaa 3714
>gb|AC107763.25| Mus musculus chromosome 5, clone RP23-180F3, complete sequence Length = 219488 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 taaaaattttaaaaagattta 90 ||||||||||||||||||||| Sbjct: 8728 taaaaattttaaaaagattta 8748
>gb|AC140286.3| Mus musculus BAC clone RP24-573E14 from chromosome 5, complete sequence Length = 164620 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 ggaagcacatggtagaagggg 246 ||||||||||||||||||||| Sbjct: 18492 ggaagcacatggtagaagggg 18472
>emb|AL023828.1|CEY17G7B Caenorhabditis elegans YAC Y17G7B, complete sequence Length = 143092 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 68 agtaaaaattttaaaaagatttaaattta 96 ||||||||||||||||| ||| ||||||| Sbjct: 105945 agtaaaaattttaaaaaaattcaaattta 105917
>gb|AC084386.2| Mus musculus BAC clone RP23-61O2 from 17, complete sequence Length = 209523 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 taaaaattttaaaaagattta 90 ||||||||||||||||||||| Sbjct: 205814 taaaaattttaaaaagattta 205834
>gb|AC009468.3| Homo sapiens BAC clone GS1-278J22 from 7, complete sequence Length = 152517 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 aaaattttaaaaagatttaaa 92 ||||||||||||||||||||| Sbjct: 18383 aaaattttaaaaagatttaaa 18363
>emb|AL136159.11| Human DNA sequence from clone RP11-165M6 on chromosome 13 Contains a novel gene and a ribosomal protein L35 (RPL35) pseudogene, complete sequence Length = 74012 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 aaaattttaaaaagatttaaa 92 ||||||||||||||||||||| Sbjct: 60782 aaaattttaaaaagatttaaa 60762
>emb|AL035455.30|HS1018E9 Human DNA sequence from clone RP5-1018E9 on chromosome 20q13.31-13.33 Contains the VAPB gene for VAMP (vesicle-associated membrane protein)-associated protein B and C, the RAB22A gene for a GTP-binding protein, a novel gene the 5' end of the PPP4R1L gene for protein phosphatase 4 regulatory subunit 1-like and three CpG islands, complete sequence Length = 148667 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 aaaattttaaaaagatttaaa 92 ||||||||||||||||||||| Sbjct: 18047 aaaattttaaaaagatttaaa 18027
>gb|AC024946.13| Homo sapiens chromosome 10 clone RP11-138M8, complete sequence Length = 155580 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 ttttaaaaagatttaaattta 96 ||||||||||||||||||||| Sbjct: 101700 ttttaaaaagatttaaattta 101720
>gb|AC024597.8| Homo sapiens chromosome 10 clone RP11-120C12, complete sequence Length = 155580 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ttttaaaaagatttaaattta 96 ||||||||||||||||||||| Sbjct: 53881 ttttaaaaagatttaaattta 53861
>gb|L63545.1|CYSCG Lymphocystis disease virus 1, complete genome Length = 102653 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ttttaaaaagatttaaattta 96 ||||||||||||||||||||| Sbjct: 81347 ttttaaaaagatttaaattta 81327
>gb|AC106779.3| Homo sapiens chromosome 16 clone RP11-343H19, complete sequence Length = 158297 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 ctctagtaaaaattttaaaaa 84 ||||||||||||||||||||| Sbjct: 74575 ctctagtaaaaattttaaaaa 74595
>gb|AC155636.3| Mus musculus BAC clone RP23-345F5 from chromosome 17, complete sequence Length = 223528 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 taaaaattttaaaaagattta 90 ||||||||||||||||||||| Sbjct: 142277 taaaaattttaaaaagattta 142257
>gb|AC154437.2| Mus musculus BAC clone RP24-194D17 from chromosome 13, complete sequence Length = 180558 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 taaaaattttaaaaagattta 90 ||||||||||||||||||||| Sbjct: 69715 taaaaattttaaaaagattta 69735
>dbj|AK040107.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430062G07 product:unclassifiable, full insert sequence Length = 1180 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 taaaaattttaaaaagattta 90 ||||||||||||||||||||| Sbjct: 1089 taaaaattttaaaaagattta 1109
>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds Length = 10847 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 gcacttccggagtacatatgt 159 ||||||||||||||||||||| Sbjct: 10118 gcacttccggagtacatatgt 10098
>gb|AC133521.3| Mus musculus BAC clone RP23-189F22 from chromosome 12, complete sequence Length = 219682 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 attttaaaaagatttaaattt 95 ||||||||||||||||||||| Sbjct: 167240 attttaaaaagatttaaattt 167260
>gb|AC009413.2| Homo sapiens BAC clone RP11-459K11 from 2, complete sequence Length = 174412 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 actccctctagtaaaaattttaaaa 83 |||| |||||||||||||||||||| Sbjct: 107935 actctctctagtaaaaattttaaaa 107911
>gb|AC007887.9|AC007887 Genomic sequence for Arabidopsis thaliana BAC F15O4 from chromosome I, complete sequence Length = 158096 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 attaaacaaaaacattcaaca 305 ||||||||||||||||||||| Sbjct: 57295 attaaacaaaaacattcaaca 57315
>emb|BX294191.4| Zebrafish DNA sequence from clone DKEY-24K20 in linkage group 5, complete sequence Length = 185868 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 attaaacaaaaacattcaaca 305 ||||||||||||||||||||| Sbjct: 179668 attaaacaaaaacattcaaca 179648
>gb|AC155924.2| Mus musculus BAC clone RP24-366C10 from 12, complete sequence Length = 142540 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 attttaaaaagatttaaattt 95 ||||||||||||||||||||| Sbjct: 117131 attttaaaaagatttaaattt 117111
>emb|CT027724.7| Zebrafish DNA sequence from clone CH211-128D6 in linkage group 19, complete sequence Length = 146035 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 attttaaaaagatttaaattt 95 ||||||||||||||||||||| Sbjct: 22274 attttaaaaagatttaaattt 22254
>emb|BX005455.8| Zebrafish DNA sequence from clone CH211-77K19 in linkage group 19, complete sequence Length = 164741 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 attttaaaaagatttaaattt 95 ||||||||||||||||||||| Sbjct: 22662 attttaaaaagatttaaattt 22642
>gb|AC120412.12| Mus musculus chromosome 5, clone RP24-447P14, complete sequence Length = 149454 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 ggaagcacatggtagaagggg 246 ||||||||||||||||||||| Sbjct: 36483 ggaagcacatggtagaagggg 36463
>gb|AC152934.2| Xenopus tropicalis clone ISB1-84B23, complete sequence Length = 87331 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 taaaaattttaaaaagattta 90 ||||||||||||||||||||| Sbjct: 39222 taaaaattttaaaaagattta 39242
>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome Length = 2843201 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 67 tagtaaaaattttaaaaagatttaaattt 95 |||||||||||||||||| | |||||||| Sbjct: 2125255 tagtaaaaattttaaaaaaaattaaattt 2125283 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 aaaaattttaaaaagatttaaattt 95 |||||||||||||||| |||||||| Sbjct: 1748447 aaaaattttaaaaagaattaaattt 1748471
>gb|AC163667.3| Mus musculus BAC clone RP23-53N20 from chromosome 13, complete sequence Length = 220804 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 22913 aaaaattttaaaaagattta 22894
>gb|AC109205.12| Mus musculus chromosome 7, clone RP23-137A4, complete sequence Length = 225302 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gtaaaaattttaaaaagatttaaa 92 ||||||||||| |||||||||||| Sbjct: 205482 gtaaaaatttttaaaagatttaaa 205505
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 40.1 bits (20), Expect = 5.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 28 acatactttagaaggtagattcatccattttactcc 63 |||||||||| || ||||||||| ||||||||||| Sbjct: 55651 acatactttaaaatatagattcattcattttactcc 55616
>gb|AC153152.4| Mus musculus BAC clone RP23-78F1 from chromosome 12, complete sequence Length = 184523 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 56518 aaaaattttaaaaagattta 56499
>gb|AC097023.6| Rattus norvegicus BAC CH230-35L12 (Children's Hospital Oakland Research Institute) complete sequence Length = 228433 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 170886 aaaaattttaaaaagattta 170905
>gb|AE013063.1| Thermoanaerobacter tengcongensis MB4, section 90 of 244 of the complete genome Length = 10792 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tagtaaaaattttaaaaaga 86 |||||||||||||||||||| Sbjct: 5243 tagtaaaaattttaaaaaga 5262
>gb|CP000061.1| Aster yellows witches'-broom phytoplasma AYWB, complete genome Length = 706569 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 aaattttaaaaagatttaaattta 96 |||||| ||||||||||||||||| Sbjct: 228596 aaatttcaaaaagatttaaattta 228573
>gb|AC115880.11| Mus musculus chromosome 9, clone RP24-365N15, complete sequence Length = 202851 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ttttaaaaagatttaaattt 95 |||||||||||||||||||| Sbjct: 12140 ttttaaaaagatttaaattt 12121
>gb|AC161329.3| Dasypus novemcinctus clone VMRC5-459N3, complete sequence Length = 144874 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 120117 aaaaattttaaaaagattta 120136
>gb|AC132284.5| Mus musculus BAC clone RP24-351O18 from chromosome 5, complete sequence Length = 174681 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 168856 aaaaattttaaaaagattta 168837
>gb|AF039038.3| Caenorhabditis elegans cosmid K06A5, complete sequence Length = 31427 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 taaaaattttaaaaagatttaaat 93 ||||||||||||||| |||||||| Sbjct: 30454 taaaaattttaaaaaaatttaaat 30477
>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete genome Length = 686194 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ttcattaccagcaaatagct 134 |||||||||||||||||||| Sbjct: 647282 ttcattaccagcaaatagct 647301
>gb|AC145199.3| Mus musculus BAC clone RP23-173N12 from chromosome 7, complete sequence Length = 220892 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 92501 aaaaattttaaaaagattta 92482
>emb|CT025843.1| Medicago truncatula chromosome 5 clone mth2-17e22, COMPLETE SEQUENCE Length = 116514 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tttaaaaagatttaaattta 96 |||||||||||||||||||| Sbjct: 63201 tttaaaaagatttaaattta 63182
>gb|AC123935.4| Mus musculus BAC clone RP23-354J3 from chromosome 13, complete sequence Length = 219370 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 174192 aaaaattttaaaaagattta 174211
>gb|AC131942.1| Mus musculus BAC clone RP24-478A20 from 3, complete sequence Length = 209411 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 aaaattttaaaaagatttaaattt 95 |||||||| ||||||||||||||| Sbjct: 126370 aaaatttttaaaagatttaaattt 126393
>gb|AC084389.1| Mus musculus BAC clone RP23-247A1 from 1, complete sequence Length = 206497 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 91422 aaaaattttaaaaagattta 91441
>ref|XM_729813.1| Plasmodium chabaudi chabaudi hypothetical protein (PC301852.00.0) partial mRNA Length = 675 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 aaattttaaaaagatttaaa 92 |||||||||||||||||||| Sbjct: 521 aaattttaaaaagatttaaa 540
>ref|XM_738194.1| Plasmodium chabaudi chabaudi transketolase (PC000215.04.0) partial mRNA Length = 2007 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 aaattttaaaaagatttaaa 92 |||||||||||||||||||| Sbjct: 983 aaattttaaaaagatttaaa 1002
>gb|AC135103.17| Medicago truncatula clone mth2-11l2, complete sequence Length = 99399 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 attttaaaaagatttaaatt 94 |||||||||||||||||||| Sbjct: 29974 attttaaaaagatttaaatt 29993
>gb|AC110682.6| Rattus norvegicus 18 BAC CH230-197I20 (Children's Hospital Oakland Research Institute) complete sequence Length = 166696 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 taaatttaggaatttgatta 108 |||||||||||||||||||| Sbjct: 160391 taaatttaggaatttgatta 160372
>emb|AL596247.22| Human DNA sequence from clone RP11-417O11 on chromosome 10 Contains the 5' end of the CAMK2G gene for calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma, the PLAU gene for plasminogen activator urokinase, three novel genes (FLJ35198), the 5' end of the VCL gene for vinculin and three CpG islands, complete sequence Length = 228098 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 ctctagtaaaaattttaaaaagat 87 ||||| |||||||||||||||||| Sbjct: 213494 ctctactaaaaattttaaaaagat 213471
>emb|AL589693.3| Human DNA sequence from clone RP11-19F10 on chromosome 6 Contains a CpG island, complete sequence Length = 165203 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tagtaaaaattttaaaaaga 86 |||||||||||||||||||| Sbjct: 111942 tagtaaaaattttaaaaaga 111961
>emb|AL359852.20| Human DNA sequence from clone RP11-299J5 on chromosome 6, complete sequence Length = 120512 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 gaagggggtgagcacctaag 259 |||||||||||||||||||| Sbjct: 92814 gaagggggtgagcacctaag 92833
>gb|AC134384.6| Mus musculus strain C57BL/6J clone rp23-393d21, complete sequence Length = 227620 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 146457 aaaaattttaaaaagattta 146438
>gb|AC134383.11| Mus musculus strain C57BL/6J clone rp23-348k4, complete sequence Length = 227587 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 146426 aaaaattttaaaaagattta 146407
>gb|AC074327.6| Homo sapiens chromosome 10 clone RP11-556E13, complete sequence Length = 189250 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 agtaaaaattttaaaaagat 87 |||||||||||||||||||| Sbjct: 105679 agtaaaaattttaaaaagat 105698
>emb|AL357312.8| Human DNA sequence from clone RP11-390F10 on chromosome Xq21.2-22.1 Contains a eukaryotic translation elongation factor 1 alpha 1 (EEF1A1) pseudogene and a high-mobility group box 1 (HMGB1) pseudogene, complete sequence Length = 187469 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 gtaaaaattttaaaaagatttaaa 92 ||||||| |||||||||||||||| Sbjct: 166130 gtaaaaaatttaaaaagatttaaa 166107
>emb|AL359765.6| Human DNA sequence from clone RP11-1147I19 on chromosome 20 Contains part of the C20orf125 gene and a CpG island, complete sequence Length = 13780 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 aaaaattttaaaaagatttaaatt 94 ||||||||| |||||||||||||| Sbjct: 11071 aaaaatttttaaaagatttaaatt 11094
>emb|AL353572.13| Human DNA sequence from clone RP11-350E12 on chromosome 9 Contains the gene for cell cycle related kinase (CCRK,CDCH), two novel pseudogenes, a 40S ribosomal protein S10 pseudogene (RPS10P3), a pseudogene similar to part of a novel protein and two CpG islands, complete sequence Length = 207295 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 aattttaaaaagatttaaat 93 |||||||||||||||||||| Sbjct: 46535 aattttaaaaagatttaaat 46516
>emb|AL160057.11| Human DNA sequence from clone RP11-25C18 on chromosome 1q31.1-31.3, complete sequence Length = 107328 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tctagtaaaaattttaaaaa 84 |||||||||||||||||||| Sbjct: 94898 tctagtaaaaattttaaaaa 94879
>gb|M22298.1|FPLREPA2 Plasmid F (from E.coli) transposon Tn1000 in repA region, 3' end Length = 745 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agatttaaatttaggaattt 103 |||||||||||||||||||| Sbjct: 626 agatttaaatttaggaattt 645
>emb|AL049744.8|HSJ177P10 Human DNA sequence from clone RP1-177P10 on chromosome 1q31.2-32.1 Contains the HF1 gene for H factor 1 (complement) protein, complete sequence Length = 150626 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 aaaaattttaaaaagatttaaatt 94 |||||||||||||||||| ||||| Sbjct: 22769 aaaaattttaaaaagattgaaatt 22746
>emb|AL049741.8|HSDJ15D12 Human DNA sequence from clone RP1-15D12 on chromosome 1q31.3-32.1 Contains the FHR-3 gene for complement factor H related 3 protein and the HFL1 gene for H factor (complement)-like 1 protein, complete sequence Length = 73320 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 aaaaattttaaaaagatttaaatt 94 |||||||||||||||||| ||||| Sbjct: 63918 aaaaattttaaaaagattgaaatt 63941
>emb|AL034554.8|HS994L9 Human DNA sequence from clone RP5-994L9 on chromosome 20p12.3-13 Contains STS and GSSs, complete sequence Length = 137739 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gtaaaaattttaaaaagatt 88 |||||||||||||||||||| Sbjct: 43958 gtaaaaattttaaaaagatt 43977
>emb|AL031447.4|HS126A5 Human DNA sequence from clone RP1-126A5 on chromosome 1p36.21-36.33 Contains the 3' end of the gene for a novel DnaJ domain-containing protein, the gene for a novel THAP domain-containing protein, the PHF13 gene for PHD finger protein 13, the gene for a novel protein (KIAA0469), the 3' end of the HKR3 gene for GLI-Kruppel family member HKR3 and two CpG islands, complete sequence Length = 112158 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tcattcattaccagcaaata 131 |||||||||||||||||||| Sbjct: 47904 tcattcattaccagcaaata 47923
>gb|AC162382.8| Mus musculus 6 BAC RP24-398M13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 200253 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 ttttaaaaagatttaaatttagga 99 ||||||||||| |||||||||||| Sbjct: 42003 ttttaaaaagagttaaatttagga 42026
>gb|AC165053.2| Phakopsora pachyrhizi clone JGIAFNA-1305N22, complete sequence Length = 40161 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 aatttgattaaactcattca 118 |||||||||||||||||||| Sbjct: 31843 aatttgattaaactcattca 31862
>gb|AC163642.3| Mus musculus BAC clone RP24-456N17 from chromosome 5, complete sequence Length = 204856 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 7645 aaaaattttaaaaagattta 7626
>gb|AC008019.60| Mus musculus strain 129S6/SvEvTac chromosome 16 clone rp21-519i24, complete sequence Length = 189707 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 145401 aaaaattttaaaaagattta 145420
>gb|AC112506.5| Homo sapiens 3 BAC RP11-286P15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 115279 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 aattttaaaaagatttaaat 93 |||||||||||||||||||| Sbjct: 94631 aattttaaaaagatttaaat 94612
>dbj|AP001918.1| Plasmid F genomic DNA, complete sequence Length = 99159 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agatttaaatttaggaattt 103 |||||||||||||||||||| Sbjct: 10405 agatttaaatttaggaattt 10424
>gb|AC013452.9| Homo sapiens chromosome 15 clone RP11-325E5 map 15q21.1, complete sequence Length = 204745 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 aaattttaaaaagatttaaa 92 |||||||||||||||||||| Sbjct: 139675 aaattttaaaaagatttaaa 139656
>gb|AC020807.2| Mus musculus chromosome 18 clone RG-MBAC_225G20, complete sequence Length = 81195 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 aaacaaaaacattcaacagc 307 |||||||||||||||||||| Sbjct: 32689 aaacaaaaacattcaacagc 32708
>gb|AC096674.3| Homo sapiens chromosome 1 clone RP11-59A2, complete sequence Length = 176747 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 taaaaattttaaaaagattt 89 |||||||||||||||||||| Sbjct: 67052 taaaaattttaaaaagattt 67033
>gb|AC036102.8| Homo sapiens chromosome 15 clone CTD-2297L20 map 15q21.1, complete sequence Length = 127603 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 aaattttaaaaagatttaaa 92 |||||||||||||||||||| Sbjct: 48711 aaattttaaaaagatttaaa 48692
>emb|BX571983.11| Zebrafish DNA sequence from clone DKEY-18M7 in linkage group 11, complete sequence Length = 248929 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 agacaattaaacaaaaacat 299 |||||||||||||||||||| Sbjct: 6681 agacaattaaacaaaaacat 6700
>emb|BX537331.2| Mouse DNA sequence from clone RP23-338B23 on chromosome 2, complete sequence Length = 171790 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 taaaaattttaaaaagattt 89 |||||||||||||||||||| Sbjct: 144674 taaaaattttaaaaagattt 144655
>gb|AC091750.1|AC091750 Mus musculus chromosome 18 clone unknown, complete sequence Length = 81195 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 aaacaaaaacattcaacagc 307 |||||||||||||||||||| Sbjct: 32689 aaacaaaaacattcaacagc 32708
>dbj|AK037009.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930036K22 product:similar to SIGNAL RECOGNITION PARTICLE 19KD [Homo sapiens], full insert sequence Length = 3298 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 aaacaaaaacattcaacagc 307 |||||||||||||||||||| Sbjct: 2649 aaacaaaaacattcaacagc 2630
>emb|BX571757.8| Zebrafish DNA sequence from clone CH211-273J9 in linkage group 16, complete sequence Length = 167101 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 attttaaaaagatttaaatt 94 |||||||||||||||||||| Sbjct: 43115 attttaaaaagatttaaatt 43096
>gb|AC006625.1| Caenorhabditis elegans cosmid C55B7, complete sequence Length = 39373 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 taaaaattttaaaaagatttaaat 93 ||||||||||||||| |||||||| Sbjct: 6527 taaaaattttaaaaaaatttaaat 6550
>gb|AC133961.3| Homo sapiens BAC clone RP13-494C23 from 4, complete sequence Length = 177787 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 74345 aaaaattttaaaaagattta 74364
>gb|AC112492.3| Homo sapiens X BAC RP11-12D5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 116568 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 taaaaattttaaaaagattt 89 |||||||||||||||||||| Sbjct: 87566 taaaaattttaaaaagattt 87585
>gb|AC025041.7|AC025041 Homo sapiens chromosome 15 clone RP11-316P21 map 15q21.2, complete sequence Length = 173387 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 taaaaattttaaaaagattt 89 |||||||||||||||||||| Sbjct: 17568 taaaaattttaaaaagattt 17587
>gb|AC016725.5| Homo sapiens BAC clone RP11-341H1 from 2, complete sequence Length = 164180 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 aaaattttaaaaagatttaa 91 |||||||||||||||||||| Sbjct: 60324 aaaattttaaaaagatttaa 60305
>gb|AC123767.2| Homo sapiens chromosome 8, clone RP11-122L4, complete sequence Length = 154078 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 taaaaattttaaaaagatttaaat 93 ||||||||||||||||||| |||| Sbjct: 62299 taaaaattttaaaaagattgaaat 62276
>gb|AC079631.16| Homo sapiens 12 BAC RP11-389G16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154907 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 taaaaattttaaaaagattt 89 |||||||||||||||||||| Sbjct: 93434 taaaaattttaaaaagattt 93415
>gb|AC098931.3| Homo sapiens chromosome 3 clone RP11-353I6, complete sequence Length = 179082 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 catggtagaagggggtgagcacct 256 |||||||||||||||||| ||||| Sbjct: 159393 catggtagaagggggtgaccacct 159370
>gb|AC019041.8| Homo sapiens BAC clone RP11-4K20 from 2, complete sequence Length = 183358 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 taaaaattttaaaaagattt 89 |||||||||||||||||||| Sbjct: 147275 taaaaattttaaaaagattt 147294
>gb|AC008905.6|AC008905 Homo sapiens chromosome 5 clone CTD-2259I14, complete sequence Length = 129430 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 acaattaaacaaaaacattc 301 |||||||||||||||||||| Sbjct: 42431 acaattaaacaaaaacattc 42450
>gb|AC008865.3|AC008865 Homo sapiens chromosome 5 clone CTD-2193I10, complete sequence Length = 191162 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 acaattaaacaaaaacattc 301 |||||||||||||||||||| Sbjct: 97118 acaattaaacaaaaacattc 97137
>emb|AL772281.7| Mouse DNA sequence from clone RP23-138O20 on chromosome 4, complete sequence Length = 58409 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tctagtaaaaattttaaaaa 84 |||||||||||||||||||| Sbjct: 33724 tctagtaaaaattttaaaaa 33743
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 aattttaaaaagatttaaat 93 |||||||||||||||||||| Sbjct: 118200 aattttaaaaagatttaaat 118219
>dbj|AB024025.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K16F13 Length = 19742 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ttttaaaaagatttaaattt 95 |||||||||||||||||||| Sbjct: 10110 ttttaaaaagatttaaattt 10091
>emb|CR759833.23| Zebrafish DNA sequence from clone DKEYP-4F2 in linkage group 14, complete sequence Length = 157355 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 agacaattaaacaaaaacat 299 |||||||||||||||||||| Sbjct: 90123 agacaattaaacaaaaacat 90104
>emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on chromosome 17, complete sequence Length = 231197 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 17767 aaaaattttaaaaagattta 17748
>gb|AC008042.10|AC008042 Homo sapiens 3q25-26 BAC CITB-159N23 (California Institute of Technology BAC Library) complete sequence Length = 121041 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ctagtaaaaattttaaaaag 85 |||||||||||||||||||| Sbjct: 33448 ctagtaaaaattttaaaaag 33467
>dbj|AP006442.2| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-105F10, complete sequence Length = 134532 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 aaaaattttaaaaagatttaaatt 94 |||||||||||||| ||||||||| Sbjct: 116477 aaaaattttaaaaaaatttaaatt 116500
>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome Length = 1895994 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 70 taaaaattttaaaaagatttaaatttag 97 |||| ||||||| ||||||||||||||| Sbjct: 326283 taaatattttaagaagatttaaatttag 326256
>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome Length = 1892819 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 70 taaaaattttaaaaagatttaaatttag 97 |||| ||||||| ||||||||||||||| Sbjct: 863359 taaatattttaagaagatttaaatttag 863332
>dbj|AP005061.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-419P8, complete sequence Length = 186074 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 aaattttaaaaagatttaaattta 96 |||||| ||||||||||||||||| Sbjct: 35018 aaatttaaaaaagatttaaattta 35041
>emb|BX004985.6| Mouse DNA sequence from clone RP23-320O16 on chromosome 2, complete sequence Length = 208765 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 aggtagattcatccattttactcc 63 ||||||||||||||||| |||||| Sbjct: 17249 aggtagattcatccattctactcc 17226
>emb|AL929565.16| Mouse DNA sequence from clone RP23-454N16 on chromosome 4, complete sequence Length = 120515 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 84991 aaaaattttaaaaagattta 85010
>gb|AC135859.4| Mus musculus BAC clone RP24-151D9 from 10, complete sequence Length = 182809 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 92957 aaaaattttaaaaagattta 92976
>gb|AC133947.3| Mus musculus BAC clone RP24-189I2 from 9, complete sequence Length = 168997 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ttttaaaaagatttaaattt 95 |||||||||||||||||||| Sbjct: 148215 ttttaaaaagatttaaattt 148196
>gb|AC139186.4| Mus musculus BAC clone RP24-92D20 from 8, complete sequence Length = 206436 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 53058 aaaaattttaaaaagattta 53077
>emb|BX005469.9| Mouse DNA sequence from clone RP23-218K9 on chromosome X, complete sequence Length = 121341 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tagtaaaaattttaaaaaga 86 |||||||||||||||||||| Sbjct: 36968 tagtaaaaattttaaaaaga 36987
>gb|U72146.1|CAU72146 Camptotheca acuminata 3-hydroxy-3-methylglutaryl coenzyme A reductase gene, complete cds Length = 7430 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 aaaattttaaaaagatttaaattt 95 ||||||||||||| |||||||||| Sbjct: 762 aaaattttaaaaatatttaaattt 785
>emb|CR938722.3| Pig DNA sequence from clone CH242-150C11 on chromosome 4, complete sequence Length = 177720 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 gccaaggaaatgaaacttcagccc 197 |||||||| ||||||||||||||| Sbjct: 102344 gccaaggagatgaaacttcagccc 102321
>gb|AC083895.21| Mus musculus strain C57BL/6J chromosome 16 clone rp23-294d8, complete sequence Length = 187658 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 146429 aaaaattttaaaaagattta 146410
>dbj|AP005136.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-715F3, complete sequence Length = 174547 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 aaattttaaaaagatttaaattta 96 |||||| ||||||||||||||||| Sbjct: 100196 aaatttaaaaaagatttaaattta 100219
>emb|AL845261.17| Mouse DNA sequence from clone RP23-174C9 on chromosome 2, complete sequence Length = 182370 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 55955 aaaaattttaaaaagattta 55936
>emb|AL844150.6| Zebrafish DNA sequence from clone DKEY-246K2, complete sequence Length = 203058 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tagtaaaaattttaaaaaga 86 |||||||||||||||||||| Sbjct: 79407 tagtaaaaattttaaaaaga 79426
>emb|AL627205.12| Mouse DNA sequence from clone RP23-41E14 on chromosome 11, complete sequence Length = 223794 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 taaaaattttaaaaagattt 89 |||||||||||||||||||| Sbjct: 148593 taaaaattttaaaaagattt 148574
>emb|AL663072.12| Mouse DNA sequence from clone RP23-22J3 on chromosome X, complete sequence Length = 249536 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 aaattttaaaaagatttaaa 92 |||||||||||||||||||| Sbjct: 211694 aaattttaaaaagatttaaa 211713
>emb|AL606919.12| Mouse DNA sequence from clone RP23-264F10 on chromosome 4, complete sequence Length = 187816 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaaaattttaaaaagattta 90 |||||||||||||||||||| Sbjct: 3152 aaaaattttaaaaagattta 3171
>gb|AY863213.1| Smittium culisetae mitochondrion, complete genome Length = 58654 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 aaattttaaaaagatttaaa 92 |||||||||||||||||||| Sbjct: 28357 aaattttaaaaagatttaaa 28338
>gb|AC037193.4| Homo sapiens chromosome 3 clone RP11-334L22 map 3p, complete sequence Length = 182261 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ctagtaaaaattttaaaaag 85 |||||||||||||||||||| Sbjct: 91774 ctagtaaaaattttaaaaag 91755
>gb|AC066583.5| Homo sapiens chromosome 3 clone RP11-203C4 map 3p, complete sequence Length = 160785 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ctagtaaaaattttaaaaag 85 |||||||||||||||||||| Sbjct: 99490 ctagtaaaaattttaaaaag 99471
>gb|AC090534.10| Mus musculus Strain C57BL6/J chromosome 18 BAC, RP23-233F17, complete sequence Length = 176773 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 aaacaaaaacattcaacagc 307 |||||||||||||||||||| Sbjct: 104891 aaacaaaaacattcaacagc 104910 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,145,261 Number of Sequences: 3902068 Number of extensions: 5145261 Number of successful extensions: 154108 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 135 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 153486 Number of HSP's gapped (non-prelim): 622 length of query: 389 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 367 effective length of database: 17,147,199,772 effective search space: 6293022316324 effective search space used: 6293022316324 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
