ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl30e12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SRG46_CAEEL (P91994) Serpentine receptor class gamma-46 (Protein... 28 9.1

>SRG46_CAEEL (P91994) Serpentine receptor class gamma-46 (Protein srg-46)|
          Length = 283

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +1

Query: 13  MPYVFLAYIHNLHSYSHLTMNK*NITYYLLARYMIGKVESMNLNE 147
           +P+VF+   H+   Y   TMN   + Y LL  Y +G++  ++L +
Sbjct: 138 IPFVFITKEHHGFDYYAFTMNIETVIYLLLTIY-LGRLTKLSLKK 181


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,372,012
Number of Sequences: 219361
Number of extensions: 264556
Number of successful extensions: 462
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 80,573,946
effective HSP length: 25
effective length of database: 75,089,921
effective search space used: 1802158104
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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