Clone Name | rbastl30e12 |
---|---|
Clone Library Name | barley_pub |
>emb|BX294162.23| Zebrafish DNA sequence from clone CH211-270C5 in linkage group 10, complete sequence Length = 150791 Score = 42.1 bits (21), Expect = 0.47 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 cttacaatgaacaagtaaaacataa 88 |||||||||||||| |||||||||| Sbjct: 92299 cttacaatgaacaaataaaacataa 92323
>emb|BX548076.6| Zebrafish DNA sequence from clone CH211-154A22 in linkage group 15, complete sequence Length = 175161 Score = 42.1 bits (21), Expect = 0.47 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 cttacaatgaacaagtaaaacataa 88 |||||||||||||||||||| |||| Sbjct: 71620 cttacaatgaacaagtaaaaaataa 71596
>emb|BX294165.10| Zebrafish DNA sequence from clone DKEYP-20E4 in linkage group 22, complete sequence Length = 125073 Score = 42.1 bits (21), Expect = 0.47 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 cttacaatgaacaagtaaaacataa 88 |||||||||||||||||||| |||| Sbjct: 70680 cttacaatgaacaagtaaaaaataa 70656
>gb|AC104881.9| Mus musculus chromosome 18, clone RP23-244A24, complete sequence Length = 184796 Score = 40.1 bits (20), Expect = 1.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 taaaacataacttattatcttttg 102 |||||| ||||||||||||||||| Sbjct: 140955 taaaacttaacttattatcttttg 140978
>gb|AC090095.7| Homo sapiens, clone RP11-296C13, complete sequence Length = 194074 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aatgaacaagtaaaacataa 88 |||||||||||||||||||| Sbjct: 94450 aatgaacaagtaaaacataa 94431
>gb|AC018443.9|AC018443 Homo sapiens chromosome 8, clone RP11-674A24, complete sequence Length = 199810 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aatgaacaagtaaaacataa 88 |||||||||||||||||||| Sbjct: 127445 aatgaacaagtaaaacataa 127426
>emb|AL935290.10| Zebrafish DNA sequence from clone CH211-270H11, complete sequence Length = 129665 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 cataacttattatcttttgg 103 |||||||||||||||||||| Sbjct: 1812 cataacttattatcttttgg 1831
>gb|AC158772.5| Mus musculus chromosome 18, clone RP23-291M14, complete sequence Length = 198851 Score = 40.1 bits (20), Expect = 1.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 taaaacataacttattatcttttg 102 |||||| ||||||||||||||||| Sbjct: 24305 taaaacttaacttattatcttttg 24328
>gb|AC163620.4| Mus musculus BAC clone RP23-117D22 from chromosome 18, complete sequence Length = 201850 Score = 38.2 bits (19), Expect = 7.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 cttacactcttacagccat 63 ||||||||||||||||||| Sbjct: 136941 cttacactcttacagccat 136959
>gb|AC150577.4| Bos taurus BAC CH240-268P24 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 167618 Score = 38.2 bits (19), Expect = 7.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 79 taaaacataacttattatctttt 101 |||||||||||||||| |||||| Sbjct: 131489 taaaacataacttattttctttt 131511
>gb|AC138084.4| Mus musculus BAC clone RP23-353F23 from chromosome 18, complete sequence Length = 186489 Score = 38.2 bits (19), Expect = 7.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 cttacactcttacagccat 63 ||||||||||||||||||| Sbjct: 64311 cttacactcttacagccat 64329
>gb|AC093483.6| Mus musculus chromosome 9, clone RP23-79K5, complete sequence Length = 262048 Score = 38.2 bits (19), Expect = 7.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 aagtaaaacataacttatt 94 ||||||||||||||||||| Sbjct: 52530 aagtaaaacataacttatt 52512
>gb|AC107662.9| Mus musculus chromosome 9, clone RP23-99B22, complete sequence Length = 233476 Score = 38.2 bits (19), Expect = 7.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 aagtaaaacataacttatt 94 ||||||||||||||||||| Sbjct: 139023 aagtaaaacataacttatt 139005
>gb|AC027118.9| Homo sapiens chromosome 10 clone RP11-573I11, complete sequence Length = 170255 Score = 38.2 bits (19), Expect = 7.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 tttggcaaggtatatgatt 117 ||||||||||||||||||| Sbjct: 161999 tttggcaaggtatatgatt 161981
>emb|BX571757.8| Zebrafish DNA sequence from clone CH211-273J9 in linkage group 16, complete sequence Length = 167101 Score = 38.2 bits (19), Expect = 7.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 aatgaacaagtaaaacata 87 ||||||||||||||||||| Sbjct: 85679 aatgaacaagtaaaacata 85661
>emb|BX294661.14| Zebrafish DNA sequence from clone CH211-199I18 in linkage group 20, complete sequence Length = 197237 Score = 38.2 bits (19), Expect = 7.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 75 caagtaaaacataacttat 93 ||||||||||||||||||| Sbjct: 8279 caagtaaaacataacttat 8297
>emb|BX470188.11| Zebrafish DNA sequence from clone DKEY-206F10 in linkage group 20, complete sequence Length = 167082 Score = 38.2 bits (19), Expect = 7.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 81 aaacataacttattatctt 99 ||||||||||||||||||| Sbjct: 59283 aaacataacttattatctt 59301
>emb|AL844491.14| Mouse DNA sequence from clone RP23-173A8 on chromosome 11, complete sequence Length = 180637 Score = 38.2 bits (19), Expect = 7.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 37 atccataacttacactctt 55 ||||||||||||||||||| Sbjct: 104796 atccataacttacactctt 104814
>emb|CR383674.8| Zebrafish DNA sequence from clone DKEY-17G17 in linkage group 25, complete sequence Length = 212086 Score = 38.2 bits (19), Expect = 7.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 77 agtaaaacataacttattatctt 99 ||||||||||| ||||||||||| Sbjct: 200686 agtaaaacatatcttattatctt 200708
>dbj|AP006351.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT04E21, TM0336, complete sequence Length = 113233 Score = 38.2 bits (19), Expect = 7.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 37 atccataacttacactcttacag 59 |||||| |||||||||||||||| Sbjct: 12284 atccatcacttacactcttacag 12306
>emb|AL831738.4| Mouse DNA sequence from clone RP23-451K12 on chromosome 4, complete sequence Length = 188894 Score = 38.2 bits (19), Expect = 7.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 aaggtatatgattggaaag 123 ||||||||||||||||||| Sbjct: 84213 aaggtatatgattggaaag 84231
>emb|AL833798.8| Mouse DNA sequence from clone RP23-130L21 on chromosome 4, complete sequence Length = 214799 Score = 38.2 bits (19), Expect = 7.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 acaagtaaaacataacttattat 96 |||| |||||||||||||||||| Sbjct: 61201 acaactaaaacataacttattat 61179 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,417,659 Number of Sequences: 3902068 Number of extensions: 1417659 Number of successful extensions: 98885 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98830 Number of HSP's gapped (non-prelim): 55 length of query: 151 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 130 effective length of database: 17,151,101,840 effective search space: 2229643239200 effective search space used: 2229643239200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)