>emb|Z49355.1|SCYJL080C S.cerevisiae chromosome X reading frame ORF YJL080c
          Length = 4603

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 90   aaaagaaaaatacaatgtcatt 111
            ||||||||||||||||||||||
Sbjct: 2915 aaaagaaaaatacaatgtcatt 2894

>emb|Z49354.1|SCYJL079C S.cerevisiae chromosome X reading frame ORF YJL079c
          Length = 4633

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 90   aaaagaaaaatacaatgtcatt 111
            ||||||||||||||||||||||
Sbjct: 1484 aaaagaaaaatacaatgtcatt 1463

>emb|X88851.1|SCESTGENE S.cerevisiae DNA for hypotetical proteins and esterase genes
          Length = 39594

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 90    aaaagaaaaatacaatgtcatt 111
             ||||||||||||||||||||||
Sbjct: 25689 aaaagaaaaatacaatgtcatt 25710

>emb|X83502.1|SCXORFS S.cerevisiae ORFs from chromosome X
          Length = 33099

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 90    aaaagaaaaatacaatgtcatt 111
             ||||||||||||||||||||||
Sbjct: 27031 aaaagaaaaatacaatgtcatt 27010

>emb|X65645.1|SCSCP S.cerevisiae SCP160 gene
          Length = 4600

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 90   aaaagaaaaatacaatgtcatt 111
            ||||||||||||||||||||||
Sbjct: 1671 aaaagaaaaatacaatgtcatt 1692

>gb|DQ331827.1| Synthetic construct Saccharomyces cerevisiae clone FLH202874.01X
            SCP160 gene, complete sequence
          Length = 3669

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 90   aaaagaaaaatacaatgtcatt 111
            ||||||||||||||||||||||
Sbjct: 1041 aaaagaaaaatacaatgtcatt 1062

>gb|AC104516.2| Drosophila melanogaster clone BACR20O17, complete sequence
          Length = 174404

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 67     aaatggcatttctcaaattgacaaa 91
              ||||||||||| |||||||||||||
Sbjct: 115277 aaatggcatttatcaaattgacaaa 115253

>gb|AC008194.9| Drosophila melanogaster clone BACR49A05, complete sequence
          Length = 181437

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 67   aaatggcatttctcaaattgacaaa 91
            ||||||||||| |||||||||||||
Sbjct: 4394 aaatggcatttatcaaattgacaaa 4370

>emb|AL159169.14| Human DNA sequence from clone RP11-408A13 on chromosome 9 Contains a
             pseudogene similar to part of cell division cycle
             associated 4 (CDCA4) (HEPP, FLJ20764) and a pseudogene
             similar to part of nuclear factor I/A (NFIA), complete
             sequence
          Length = 86155

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 89    aaaaagaaaaatacaatgtca 109
             |||||||||||||||||||||
Sbjct: 65055 aaaaagaaaaatacaatgtca 65035

>gb|AC010421.7| Homo sapiens chromosome 5 clone CTD-2191P18, complete sequence
          Length = 129039

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 114   cccaatttaactggaaaaatg 134
             |||||||||||||||||||||
Sbjct: 29011 cccaatttaactggaaaaatg 28991

>gb|AC139783.3| Homo sapiens chromosome 5 clone RP11-1084J3, complete sequence
          Length = 189108

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 114    cccaatttaactggaaaaatg 134
              |||||||||||||||||||||
Sbjct: 161617 cccaatttaactggaaaaatg 161597

>gb|AC139792.2| Homo sapiens chromosome 5 clone RP11-1250I15, complete sequence
          Length = 207459

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 114    cccaatttaactggaaaaatg 134
              |||||||||||||||||||||
Sbjct: 133042 cccaatttaactggaaaaatg 133062

>gb|AE003510.5| Drosophila melanogaster chromosome X, section 62 of 74 of the complete
              sequence
          Length = 297236

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 67     aaatggcatttctcaaattgacaaa 91
              ||||||||||| |||||||||||||
Sbjct: 289952 aaatggcatttatcaaattgacaaa 289928

>gb|AC102081.15| Mus musculus chromosome 18, clone RP23-43H5, complete sequence
          Length = 245125

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    aaatactagcactatccaaa 171
              ||||||||||||||||||||
Sbjct: 229133 aaatactagcactatccaaa 229114

>gb|AC149479.1| Populus trichocarpa clone Pop1-017N13, complete sequence
          Length = 129742

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    aattgacaaaaagaaaaata 101
             ||||||||||||||||||||
Sbjct: 32237 aattgacaaaaagaaaaata 32218

>gb|AC149428.1| Populus trichocarpa clone Pop1-080J15, complete sequence
          Length = 98246

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 82   aattgacaaaaagaaaaata 101
            ||||||||||||||||||||
Sbjct: 7785 aattgacaaaaagaaaaata 7766

>gb|AC149427.1| Populus trichocarpa clone Pop1-065A01, complete sequence
          Length = 84222

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    aattgacaaaaagaaaaata 101
             ||||||||||||||||||||
Sbjct: 78752 aattgacaaaaagaaaaata 78733

>emb|AL023844.1|CEY48A6B Caenorhabditis elegans YAC Y48A6B, complete sequence
          Length = 75073

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    aaagctgaaaattttcaaat 70
             ||||||||||||||||||||
Sbjct: 62384 aaagctgaaaattttcaaat 62403

>gb|AC149580.19| Medicago truncatula clone mth2-123f14, complete sequence
          Length = 123565

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    aattgacaaaaagaaaaata 101
             ||||||||||||||||||||
Sbjct: 74455 aattgacaaaaagaaaaata 74436

>emb|AL732314.18| Human DNA sequence from clone RP13-465B17 on chromosome X Contains
           the 5' end of the gene for protein phosphatase 2A 48 kDa
           regulatory subunit (PR48), a fatty acid binding protein
           5 (psoriasis-associated) (FABP5) pseudogene, a
           pseudogene similar to part of keratin 18 (KRT18) and
           nine CpG islands, complete sequence
          Length = 218723

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  agctgaaaattttcaaatgg 72
           ||||||||||||||||||||
Sbjct: 573 agctgaaaattttcaaatgg 592

>emb|BX000476.5| Human DNA sequence from clone LL0XNC01-148H9 on chromosome X Contains
             the 5' end of a variant of the gene for protein
             phosphatase 2A 48 kDa regulatory subunit (PR48) and seven
             CpG islands, complete sequence
          Length = 33340

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    agctgaaaattttcaaatgg 72
             ||||||||||||||||||||
Sbjct: 31913 agctgaaaattttcaaatgg 31932

>emb|AL357115.24| Human DNA sequence from clone RP11-102P23 on chromosome Xq13.3-21.1
             Contains the 5' end of the NSBP1 gene for nucleosomal
             binding protein 1 and the SH3BGRL gene for SH3 domain
             binding glutamic acid-rich protein like, complete sequence
          Length = 164012

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   aaaaatgagattctgtcttg 147
             ||||||||||||||||||||
Sbjct: 47983 aaaaatgagattctgtcttg 48002

>emb|AL354915.5| Human DNA sequence from clone RP11-392A19 on chromosome 13 Contains a
              novel pseudogene and a keratin 18 (KRT18) (K18, CYK18)
              pseudogene, complete sequence
          Length = 156442

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 79     tcaaattgacaaaaagaaaaatac 102
              ||||||| ||||||||||||||||
Sbjct: 111080 tcaaattaacaaaaagaaaaatac 111103

>emb|AL663078.8| Mouse DNA sequence from clone RP23-440P13 on chromosome 11 Contains the
             gene for a novel protein (6230425C22Rik) similar to Homo
             sapiens CGI-48 protein, the 5' end of the Mbtd1 gene for
             mbt domain containing 1 and one CpG island, complete
             sequence
          Length = 126275

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    aaaaatacaatgtcatttac 114
             ||||||||||||||||||||
Sbjct: 83482 aaaaatacaatgtcatttac 83501

>gb|AC079382.20| Homo sapiens 3 BAC RP11-93B21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167627

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    tgacaaaaagaaaaatacaa 104
             ||||||||||||||||||||
Sbjct: 82998 tgacaaaaagaaaaatacaa 82979

>gb|AC022909.13| Homo sapiens chromosome 8, clone RP11-682G1, complete sequence
          Length = 182241

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 90    aaaagaaaaatacaatgtcattta 113
             ||||||||| ||||||||||||||
Sbjct: 64647 aaaagaaaactacaatgtcattta 64624

>dbj|AK128683.1| Homo sapiens cDNA FLJ46849 fis, clone UTERU3006538
          Length = 4436

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 30  aggtgtagcaatgcttgtgt 49
           ||||||||||||||||||||
Sbjct: 526 aggtgtagcaatgcttgtgt 545

>gb|AC012609.7| Homo sapiens chromosome 5 clone CTC-531M23, complete sequence
          Length = 148433

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    aggtgtagcaatgcttgtgt 49
             ||||||||||||||||||||
Sbjct: 78935 aggtgtagcaatgcttgtgt 78954

>gb|AC025757.3| Homo sapiens chromosome 5 clone CTD-2195H9, complete sequence
          Length = 135862

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 61    attttcaaatggcatttctcaaat 84
             ||||||||||||||||| ||||||
Sbjct: 80965 attttcaaatggcatttttcaaat 80942

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 51       aaagctgaaaattttcaaat 70
                ||||||||||||||||||||
Sbjct: 20540305 aaagctgaaaattttcaaat 20540286

>dbj|AK222260.1| Ciona intestinalis cDNA, clone:ciht037g03, full insert sequence
          Length = 2968

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  caatttaactggaaaaatga 135
            ||||||||||||||||||||
Sbjct: 2603 caatttaactggaaaaatga 2622

>gb|AC157363.6| Mus musculus chromosome 1, clone RP23-478L14, complete sequence
          Length = 209942

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 84    ttgacaaaaagaaaaatacaatgt 107
             |||||||||||||||||| |||||
Sbjct: 31928 ttgacaaaaagaaaaataaaatgt 31905

>emb|BX248399.5| Zebrafish DNA sequence from clone CH211-233A1 in linkage group 10,
              complete sequence
          Length = 158884

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     aattttcaaatggcatttct 79
              ||||||||||||||||||||
Sbjct: 141338 aattttcaaatggcatttct 141357

>dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0659D09
          Length = 168253

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     aaagctgaaaattttcaaat 70
              ||||||||||||||||||||
Sbjct: 112600 aaagctgaaaattttcaaat 112581

>emb|BX004783.13| Zebrafish DNA sequence from clone DKEY-14E1 in linkage group 6,
             complete sequence
          Length = 204385

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    aaaagaaaaatacaatgtca 109
             ||||||||||||||||||||
Sbjct: 73688 aaaagaaaaatacaatgtca 73707

>gb|AC163714.3| Gallus gallus BAC clone TAM31-13E5 from chromosome w, complete sequence
          Length = 191678

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    aaagctgaaaattttcaaat 70
             ||||||||||||||||||||
Sbjct: 70301 aaagctgaaaattttcaaat 70320

>gb|M82964.1|YSCCDC25A Saccharomyces kluyveri CDC25 gene, 3' end
          Length = 3644

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 74   atttctcaaattgacaaaaa 93
            ||||||||||||||||||||
Sbjct: 1241 atttctcaaattgacaaaaa 1222

>dbj|AP005360.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1529G8, complete
             sequence
          Length = 147788

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 90    aaaagaaaaatacaatgtcattta 113
             ||||||||| ||||||||||||||
Sbjct: 15416 aaaagaaaactacaatgtcattta 15439


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,092,520
Number of Sequences: 3902068
Number of extensions: 4092520
Number of successful extensions: 83358
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83263
Number of HSP's gapped (non-prelim): 95
length of query: 271
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 249
effective length of database: 17,147,199,772
effective search space: 4269652743228
effective search space used: 4269652743228
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)