ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl30e08 |
|---|---|
| Clone Library Name | barley_pub |
>SYA_GLOVI (Q7NI36) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 871 Score = 77.8 bits (190), Expect = 1e-14 Identities = 43/99 (43%), Positives = 57/99 (57%) Frame = -3 Query: 449 RILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLVAAFSPGVVKMGVQA 270 R+LV ++GD + + LKSAAEHL+ L + AV+LGS+P KVSLVAAF G V G+ A Sbjct: 763 RVLVADLGDTEPEALKSAAEHLLAKLGEGGAVVLGSAPAADKVSLVAAFGKGAVAKGLNA 822 Query: 269 GKFVXXXXXXXXXXXXXXXXXXXXXGRKPENLPDALEKA 153 GKFV G++PE L +AL +A Sbjct: 823 GKFVGEVAKITGGGGGGRPNLAQAGGKQPEKLKNALSEA 861
>SYA_SYNP6 (Q5N4B5) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 892 Score = 71.2 bits (173), Expect = 1e-12 Identities = 43/113 (38%), Positives = 63/113 (55%) Frame = -3 Query: 491 SLASKAVLVEPHNVRILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLV 312 +L S+A+ V + ++LVE + VDA L++AAE L L D AV+LGSSP +GKV+LV Sbjct: 772 ALVSQAIPVG--DAQVLVETLTGVDAAALQTAAERLQQKLGDAGAVVLGSSPEEGKVTLV 829 Query: 311 AAFSPGVVKMGVQAGKFVXXXXXXXXXXXXXXXXXXXXXGRKPENLPDALEKA 153 AAF P ++ G++AG+F+ GR LP+A+ A Sbjct: 830 AAFGPAIIAKGLKAGQFIGGIAKICGGGGGGRPNLAQAGGRDASKLPEAIAAA 882
>SYA_ANASP (Q8YUD4) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 880 Score = 65.9 bits (159), Expect = 6e-11 Identities = 43/100 (43%), Positives = 55/100 (55%) Frame = -3 Query: 449 RILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLVAAFSPGVVKMGVQA 270 +I+V + VD + LKSAAE L+ + + AV+LGS P KVSLVAAFSP V K G+QA Sbjct: 774 KIIVAQLEGVDPESLKSAAERLLQKIGN-GAVVLGSVPEADKVSLVAAFSPEVNKKGLQA 832 Query: 269 GKFVXXXXXXXXXXXXXXXXXXXXXGRKPENLPDALEKAR 150 GKF+ GR LP ALE+A+ Sbjct: 833 GKFIGAIAKICGGGGGGRPNLAQAGGRDASKLPAALEQAQ 872
>SYA_SYNY3 (P74423) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 877 Score = 61.2 bits (147), Expect = 1e-09 Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 1/101 (0%) Frame = -3 Query: 449 RILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLVAAFSPGVVK-MGVQ 273 +ILV ++G VD + LK+AAE L L + +AV+L S P +GKVSLVAAFSP +VK ++ Sbjct: 770 KILVADLGTVDGESLKTAAERLQQKLGE-SAVVLASIPEEGKVSLVAAFSPQLVKTKQLK 828 Query: 272 AGKFVXXXXXXXXXXXXXXXXXXXXXGRKPENLPDALEKAR 150 AG+F+ GR LP+AL A+ Sbjct: 829 AGQFIGAIAKICGGGGGGRPNLAQAGGRDASKLPEALATAK 869
>SYA_SYNPX (Q7U3R9) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 889 Score = 57.4 bits (137), Expect = 2e-08 Identities = 45/117 (38%), Positives = 58/117 (49%), Gaps = 3/117 (2%) Frame = -3 Query: 491 SLASKAVLVEPHNVRILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGS--SPGD-GKV 321 +LA+KA V ++LVE + V+ GL+ AA+ L L D AAV++G PGD GKV Sbjct: 765 ALAAKAEAVG--EFQLLVERLDGVEGAGLQGAAQSLADQLGDGAAVVIGGLPDPGDLGKV 822 Query: 320 SLVAAFSPGVVKMGVQAGKFVXXXXXXXXXXXXXXXXXXXXXGRKPENLPDALEKAR 150 LVAAF V+ +QAGKF+ GR LP AL AR Sbjct: 823 ILVAAFGKQVIAAKLQAGKFIGGIAKQCGGGGGGRPNLAQAGGRDGAALPGALAAAR 879
>SYA_PROMM (Q7V419) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 892 Score = 57.0 bits (136), Expect = 3e-08 Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 3/81 (3%) Frame = -3 Query: 491 SLASKAVLVEPHNVRILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSP---GDGKV 321 +LA++AV V + ++LV + V+ GL++AA+ L+ L D AAV+LG P +GKV Sbjct: 770 ALATQAVAVGEY--QLLVARLDGVEGAGLQNAAQGLLDQLGDGAAVVLGGLPDPSDEGKV 827 Query: 320 SLVAAFSPGVVKMGVQAGKFV 258 LVAAF ++ G QAGKF+ Sbjct: 828 ILVAAFGKQLIAQGQQAGKFI 848
>SYA_SYNEL (Q8DH56) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 882 Score = 52.4 bits (124), Expect = 7e-07 Identities = 35/101 (34%), Positives = 49/101 (48%) Frame = -3 Query: 455 NVRILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLVAAFSPGVVKMGV 276 N +L+ ++ VD GLK+AAE L+ L AV+L + P KV+L+ A S VV+ GV Sbjct: 773 NSHVLIASLAGVDPQGLKTAAEWLLNKL-GSGAVVLATQPAADKVNLLVAASQDVVQRGV 831 Query: 275 QAGKFVXXXXXXXXXXXXXXXXXXXXXGRKPENLPDALEKA 153 AG+ V G +P L +ALE A Sbjct: 832 HAGQLVAALAQVCGGRGGGRPNFAQAGGSQPAKLAEALELA 872
>SYA_PROMA (Q7VEG5) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 892 Score = 52.0 bits (123), Expect = 9e-07 Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 3/117 (2%) Frame = -3 Query: 491 SLASKAVLVEPHNVRILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSP---GDGKV 321 +L+ K +V N + L+E + V D ++S + LV L D AAV+L P KV Sbjct: 768 ALSLKNKVVSLTNSQYLIERLDGVTGDAIQSVVKTLVDELGDNAAVVLAGMPDLNDQKKV 827 Query: 320 SLVAAFSPGVVKMGVQAGKFVXXXXXXXXXXXXXXXXXXXXXGRKPENLPDALEKAR 150 LVAAF ++ G+ AG+F+ GR P L DAL+ A+ Sbjct: 828 ILVAAFGSEIIAQGLHAGQFLGPIAEICGGGGGGRPNFAQAGGRDPTKLDDALDLAK 884
>SYA_CLOPE (Q8XJH6) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 879 Score = 45.1 bits (105), Expect = 1e-04 Identities = 32/106 (30%), Positives = 49/106 (46%) Frame = -3 Query: 467 VEPHNVRILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLVAAFSPGVV 288 VE + V ++ + DVD + L+ A+ + L + V+L S G GKV+LVA + + Sbjct: 768 VEINGVELVTAELKDVDGNSLRDLADKVRNKLNN-GIVVLASDNG-GKVNLVAMATKNSL 825 Query: 287 KMGVQAGKFVXXXXXXXXXXXXXXXXXXXXXGRKPENLPDALEKAR 150 GV GK + G+ PEN+ ALEKA+ Sbjct: 826 ANGVHCGKVIKEVAAVVGGGGGGRPDMAQAGGKNPENIAKALEKAK 871
>SYA_PROMP (Q7V3N0) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 886 Score = 44.3 bits (103), Expect = 2e-04 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 2/101 (1%) Frame = -3 Query: 446 ILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPG--DGKVSLVAAFSPGVVKMGVQ 273 +++ + +D + L+SAA L L D + VILG P + K+ V +F +VK G+ Sbjct: 773 LIISQLDGLDGNSLQSAALDLTSKLGDKSVVILGGIPDKENRKLLFVVSFGEDLVKRGMH 832 Query: 272 AGKFVXXXXXXXXXXXXXXXXXXXXXGRKPENLPDALEKAR 150 AGK + + + L DALE AR Sbjct: 833 AGKLINDISRICSGGGGGKPNFAQAGAKDIDKLNDALEYAR 873
>SYA_BACHD (Q9KDE6) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 879 Score = 43.9 bits (102), Expect = 2e-04 Identities = 31/110 (28%), Positives = 51/110 (46%) Frame = -3 Query: 491 SLASKAVLVEPHNVRILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLV 312 SL ++ +E V +L + + D DGL+S + L + P+ VI+ + +GKV++V Sbjct: 763 SLVNEVQKIE--GVPVLAKAISGADMDGLRSIVDKLKQEI--PSVVIVLGTASEGKVNIV 818 Query: 311 AAFSPGVVKMGVQAGKFVXXXXXXXXXXXXXXXXXXXXXGRKPENLPDAL 162 A + ++ G AGK V G++PE L DAL Sbjct: 819 AGVTKDLINKGYHAGKLVKEVATRCGGGGGGRPDMAQAGGKQPEKLQDAL 868
>SYA_BORPE (Q7VXE1) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 874 Score = 41.2 bits (95), Expect = 0.002 Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%) Frame = -3 Query: 467 VEPHNVRILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLVAAFS---P 297 VE +++L ++GDVD L+ ++L L+ PA V+L + DGK+SLV + Sbjct: 764 VEVKGIKVLAASIGDVDPKALRGMVDNLKDRLK-PAVVLLAAGSADGKISLVGGVTADLT 822 Query: 296 GVVKMGVQAG 267 G +K G G Sbjct: 823 GRIKAGDLVG 832
>SYA_BORPA (Q7W6N4) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 874 Score = 41.2 bits (95), Expect = 0.002 Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%) Frame = -3 Query: 467 VEPHNVRILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLVAAFS---P 297 VE +++L ++GDVD L+ ++L L+ PA V+L + DGK+SLV + Sbjct: 764 VEVKGIKVLAASIGDVDPKALRGMVDNLKDRLK-PAVVLLAAGSADGKISLVGGVTADLT 822 Query: 296 GVVKMGVQAG 267 G +K G G Sbjct: 823 GRIKAGDLVG 832
>SYA_BORBR (Q7WHL6) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 874 Score = 41.2 bits (95), Expect = 0.002 Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%) Frame = -3 Query: 467 VEPHNVRILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLVAAFS---P 297 VE +++L ++GDVD L+ ++L L+ PA V+L + DGK+SLV + Sbjct: 764 VEVKGIKVLAASIGDVDPKALRGMVDNLKDRLK-PAVVLLAAGSADGKISLVGGVTADLT 822 Query: 296 GVVKMGVQAG 267 G +K G G Sbjct: 823 GRIKAGDLVG 832
>SYA_CHLTE (Q8KG04) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 885 Score = 38.5 bits (88), Expect = 0.010 Identities = 36/110 (32%), Positives = 47/110 (42%), Gaps = 1/110 (0%) Frame = -3 Query: 485 ASKAVLVEPHNVRILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLVAA 306 AS A E + RI+ E + V D L+ AA L + P AV L DGKVSLVA Sbjct: 767 ASLAGGEEVNGCRIMTERLDGVSGDELRQAAVALRERV--PCAVGLLCGVADGKVSLVAF 824 Query: 305 FSPGVVK-MGVQAGKFVXXXXXXXXXXXXXXXXXXXXXGRKPENLPDALE 159 S VK + + AGK V G++P + A+E Sbjct: 825 ASDEAVKSLKLDAGKLVKEAAASVKGGGGGKLELATAGGKEPAGIDKAIE 874
>SYA_GEOKA (Q5KWU5) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 887 Score = 35.4 bits (80), Expect = 0.084 Identities = 24/67 (35%), Positives = 37/67 (55%) Frame = -3 Query: 458 HNVRILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLVAAFSPGVVKMG 279 + V +L + D + L++ A+ L L A ++L S+ G GKV L+AA + +VK G Sbjct: 780 NGVPVLAAKVQANDMNQLRAMADDLKQKL-GTAVIVLASAQG-GKVQLIAAVTDDLVKKG 837 Query: 278 VQAGKFV 258 AGK V Sbjct: 838 FHAGKLV 844
>SYA_BACLD (Q65GS5) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 878 Score = 33.5 bits (75), Expect = 0.32 Identities = 25/104 (24%), Positives = 46/104 (44%) Frame = -3 Query: 464 EPHNVRILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLVAAFSPGVVK 285 E +++L E + D + L++ + L L A ++LG+ + KV++ A + +++ Sbjct: 769 EIDGIKLLAEKVNAKDMNHLRTMVDDLKAKLGS-AVIVLGAVQNE-KVNISAGVTKDLIE 826 Query: 284 MGVQAGKFVXXXXXXXXXXXXXXXXXXXXXGRKPENLPDALEKA 153 G AGK V G++PE L +AL A Sbjct: 827 RGFHAGKLVKQVAEACGGGGGGRPDMAQAGGKQPERLAEALASA 870
>SYA_BACSU (O34526) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 878 Score = 33.1 bits (74), Expect = 0.42 Identities = 25/101 (24%), Positives = 44/101 (43%) Frame = -3 Query: 464 EPHNVRILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLVAAFSPGVVK 285 E V +L + D + L++ + L L A ++LG+ D KV++ A + +++ Sbjct: 769 EVDGVNVLAAKVNAKDMNHLRTMVDELKAKLGS-AVIVLGAVQND-KVNISAGVTKDLIE 826 Query: 284 MGVQAGKFVXXXXXXXXXXXXXXXXXXXXXGRKPENLPDAL 162 G+ AGK V G++PE L +AL Sbjct: 827 KGLHAGKLVKQAAEVCGGGGGGRPDMAQAGGKQPEKLEEAL 867
>SYA_SHIFL (Q7UBU3) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 876 Score = 32.3 bits (72), Expect = 0.71 Identities = 24/78 (30%), Positives = 45/78 (57%) Frame = -3 Query: 491 SLASKAVLVEPHNVRILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLV 312 +L+SKA+ V + V++LV + V+ L++ + L L + +I+ ++ +GKVSL+ Sbjct: 760 NLSSKAIDV--NGVKLLVSELSGVEPKMLRTMVDDLKNQLG--STIIVLATVAEGKVSLI 815 Query: 311 AAFSPGVVKMGVQAGKFV 258 A S V V+AG+ + Sbjct: 816 AGVSKDVTDR-VKAGELI 832
>SYA_ECO57 (Q8X3W8) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 876 Score = 32.3 bits (72), Expect = 0.71 Identities = 24/78 (30%), Positives = 45/78 (57%) Frame = -3 Query: 491 SLASKAVLVEPHNVRILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLV 312 +L+SKA+ V + V++LV + V+ L++ + L L + +I+ ++ +GKVSL+ Sbjct: 760 NLSSKAIDV--NGVKLLVSELSGVEPKMLRTMVDDLKNQLG--STIIVLATVAEGKVSLI 815 Query: 311 AAFSPGVVKMGVQAGKFV 258 A S V V+AG+ + Sbjct: 816 AGVSKDVTDR-VKAGELI 832
>SYA_RALEJ (Q474F4) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 874 Score = 31.2 bits (69), Expect = 1.6 Identities = 30/109 (27%), Positives = 46/109 (42%) Frame = -3 Query: 488 LASKAVLVEPHNVRILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLVA 309 LA +AV V+ +++L + D L+ + L LQ A V+ ++ DGKVSL+A Sbjct: 760 LAEQAVDVK--GLKVLAAQLEGADVKTLRETMDKLKDKLQSAAIVL--AAVADGKVSLIA 815 Query: 308 AFSPGVVKMGVQAGKFVXXXXXXXXXXXXXXXXXXXXXGRKPENLPDAL 162 + V+AG+ V G +P LP AL Sbjct: 816 GVTADATGK-VKAGELVNFVAQQVGGKGGGRPDMAQAGGTEPGKLPQAL 863
>CBIO4_BACHK (Q6HG98) Putative cobalt import ATP-binding protein cbiO 4| Length = 551 Score = 31.2 bits (69), Expect = 1.6 Identities = 15/58 (25%), Positives = 30/58 (51%) Frame = -3 Query: 440 VENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLVAAFSPGVVKMGVQAG 267 + N+ V AD + A +H+ ++Q ++L G GK +L+ F ++ +G + G Sbjct: 7 INNLSFVYADENEYALQHISLSIQKGEFIVLAGGSGSGKTTLLKHFKKELLPIGKRTG 64
>SYA_CHRVO (Q7NXM2) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 877 Score = 30.8 bits (68), Expect = 2.1 Identities = 30/110 (27%), Positives = 47/110 (42%) Frame = -3 Query: 491 SLASKAVLVEPHNVRILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLV 312 SLA A + + V++L + D L+ + L L A V+ ++ GDGKV+LV Sbjct: 762 SLADAAADI--NGVKVLAAELPGADNTALRETLDKLKDKLGSAAIVL--AAKGDGKVALV 817 Query: 311 AAFSPGVVKMGVQAGKFVXXXXXXXXXXXXXXXXXXXXXGRKPENLPDAL 162 A + + ++AG+ V G +PENL AL Sbjct: 818 AGVTADLTGK-LKAGELVNFVAQQVGGKGGGRPDMAQAGGTQPENLDAAL 866
>CBIO4_BACAN (Q81N53) Putative cobalt import ATP-binding protein cbiO 4| Length = 551 Score = 30.4 bits (67), Expect = 2.7 Identities = 15/58 (25%), Positives = 30/58 (51%) Frame = -3 Query: 440 VENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLVAAFSPGVVKMGVQAG 267 ++N+ V AD + A +H+ ++Q + L G GK +L+ F ++ +G + G Sbjct: 7 IKNLSFVYADENEKALQHISLSVQKGEFIALAGGSGSGKTTLLKHFKKELLPIGKRTG 64
>SYA_OCEIH (Q8EPS9) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 879 Score = 30.4 bits (67), Expect = 2.7 Identities = 24/102 (23%), Positives = 43/102 (42%) Frame = -3 Query: 464 EPHNVRILVENMGDVDADGLKSAAEHLVGTLQDPAAVILGSSPGDGKVSLVAAFSPGVVK 285 E V +L + + D + L+S + L L + VIL ++ +GKV LVA + +++ Sbjct: 769 EISGVPVLAQEVNVKDMNQLRSMMDELKQKLS--SGVILLAAENNGKVQLVAGVTKDMLE 826 Query: 284 MGVQAGKFVXXXXXXXXXXXXXXXXXXXXXGRKPENLPDALE 159 + AG V G+ P + +AL+ Sbjct: 827 KNMHAGNIVKQAATVCGGGGGGRPDMAQAGGKDPSKIKEALQ 868
>CRYD_GIBZE (Q4I1Q6) Putative crytochrome DASH| Length = 678 Score = 29.3 bits (64), Expect = 6.0 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 5/65 (7%) Frame = -2 Query: 411 WAEKRSRASCGNSPRPSRGDFRFKSRRR*GEPGRCLQSWSRENGSASR-----QVCGWNS 247 W + +ASCGN PR SR + K + GR ++W E S R Q+C Sbjct: 454 WGNWQYQASCGNDPR-SRSFNQVKQAFDYDQDGRFTRTWVNEVKSIDRLEHVFQICTCPK 512 Query: 246 ETLRR 232 + L + Sbjct: 513 QELEK 517
>CR1_HUMAN (P17927) Complement receptor type 1 precursor (C3b/C4b receptor)| (CD35 antigen) Length = 2039 Score = 28.9 bits (63), Expect = 7.8 Identities = 15/25 (60%), Positives = 15/25 (60%) Frame = +2 Query: 419 PHPPCSQLGS*HYEVQRVQLYLPGM 493 PHPP Q G HY V LYLPGM Sbjct: 1849 PHPPKIQNG--HYIGGHVSLYLPGM 1871
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 28.9 bits (63), Expect = 7.8 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Frame = +1 Query: 307 AATRLTLPSPGLEPKITAA--GSWRVPTRCSAALFSPSASTSPMF 435 AA + L SP L K A G R+ R SAA P+AS SP + Sbjct: 2 AAATMALSSPALAGKAAAKVFGEGRITMRKSAAKPKPAASGSPWY 46
>ZTOX_STRAG (P0A4M2) Zeta toxin| Length = 287 Score = 28.9 bits (63), Expect = 7.8 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -3 Query: 374 LQDPAAVILGSSPGDGKVSLVAAFS 300 ++ P A +LG PG GK SL +A S Sbjct: 30 VESPTAFLLGGQPGSGKTSLRSAIS 54
>ZTOX_ENTFA (P0A4M1) Zeta toxin| Length = 287 Score = 28.9 bits (63), Expect = 7.8 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -3 Query: 374 LQDPAAVILGSSPGDGKVSLVAAFS 300 ++ P A +LG PG GK SL +A S Sbjct: 30 VESPTAFLLGGQPGSGKTSLRSAIS 54 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,781,965 Number of Sequences: 219361 Number of extensions: 1504260 Number of successful extensions: 3953 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 3833 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3944 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
