ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl30e08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 129 bits (65), Expect = 9e-27 Identities = 245/305 (80%) Strand = Plus / Minus Query: 136 gcaacaatttcagctctagccttctctagggcatccggcaagttctctggcttccgaccg 195 |||||||||||| | | |||||||| || ||| ||||||||||||| |||||||| || Sbjct: 7592027 gcaacaatttcatcccgtgccttctcgagcgcacccggcaagttctccggcttccgtcca 7591968 Query: 196 ccagcctgcgcaaagttcggtttgccgccaccacctccgccgcaaagtttcgctattcca 255 || || || ||||| || || |||||||| || ||||||||||| ||||| ||||| || Sbjct: 7591967 ccggcttgggcaaaattgggcttgccgccgccgcctccgccgcagagtttggctatgccg 7591908 Query: 256 cccacaaacttgcctgcttgcactcccattttcacgactccaggactgaaggcagcgacc 315 || || ||||| ||||| || | ||||| || ||||| || || |||||||| || ||| Sbjct: 7591907 ccgacgaacttccctgcctggatacccatcttgacgacgccggggctgaaggccgcaacc 7591848 Query: 316 aggctcaccttaccgtctcctggacttgaacctaaaatcaccgcggctgggtcttggaga 375 | ||| ||||| || || || || ||||| ||||| ||||||||||| ||||||| || Sbjct: 7591847 aagctgaccttgccatcgcccgggcttgagcctaagatcaccgcggcagggtcttcaagg 7591788 Query: 376 gttcccacaagatgctcggctgcgcttttcagcccatcagcatccacatcccccatgttc 435 || |||| |||| ||| || ||||| ||||| ||||| || |||||||| ||||||||| Sbjct: 7591787 gtgtccacgagatactccgcggcgctcttcagaccatcggcgtccacatcacccatgttc 7591728 Query: 436 tcaac 440 ||||| Sbjct: 7591727 tcaac 7591723
>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_C11 Length = 124827 Score = 129 bits (65), Expect = 9e-27 Identities = 245/305 (80%) Strand = Plus / Minus Query: 136 gcaacaatttcagctctagccttctctagggcatccggcaagttctctggcttccgaccg 195 |||||||||||| | | |||||||| || ||| ||||||||||||| |||||||| || Sbjct: 15282 gcaacaatttcatcccgtgccttctcgagcgcacccggcaagttctccggcttccgtcca 15223 Query: 196 ccagcctgcgcaaagttcggtttgccgccaccacctccgccgcaaagtttcgctattcca 255 || || || ||||| || || |||||||| || ||||||||||| ||||| ||||| || Sbjct: 15222 ccggcttgggcaaaattgggcttgccgccgccgcctccgccgcagagtttggctatgccg 15163 Query: 256 cccacaaacttgcctgcttgcactcccattttcacgactccaggactgaaggcagcgacc 315 || || ||||| ||||| || | ||||| || ||||| || || |||||||| || ||| Sbjct: 15162 ccgacgaacttccctgcctggatacccatcttgacgacgccggggctgaaggccgcaacc 15103 Query: 316 aggctcaccttaccgtctcctggacttgaacctaaaatcaccgcggctgggtcttggaga 375 | ||| ||||| || || || || ||||| ||||| ||||||||||| ||||||| || Sbjct: 15102 aagctgaccttgccatcgcccgggcttgagcctaagatcaccgcggcagggtcttcaagg 15043 Query: 376 gttcccacaagatgctcggctgcgcttttcagcccatcagcatccacatcccccatgttc 435 || |||| |||| ||| || ||||| ||||| ||||| || |||||||| ||||||||| Sbjct: 15042 gtgtccacgagatactccgcggcgctcttcagaccatcggcgtccacatcacccatgttc 14983 Query: 436 tcaac 440 ||||| Sbjct: 14982 tcaac 14978
>dbj|AK066714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088K03, full insert sequence Length = 3176 Score = 129 bits (65), Expect = 9e-27 Identities = 245/305 (80%) Strand = Plus / Minus Query: 136 gcaacaatttcagctctagccttctctagggcatccggcaagttctctggcttccgaccg 195 |||||||||||| | | |||||||| || ||| ||||||||||||| |||||||| || Sbjct: 2923 gcaacaatttcatcccgtgccttctcgagcgcacccggcaagttctccggcttccgtcca 2864 Query: 196 ccagcctgcgcaaagttcggtttgccgccaccacctccgccgcaaagtttcgctattcca 255 || || || ||||| || || |||||||| || ||||||||||| ||||| ||||| || Sbjct: 2863 ccggcttgggcaaaattgggcttgccgccgccgcctccgccgcagagtttggctatgccg 2804 Query: 256 cccacaaacttgcctgcttgcactcccattttcacgactccaggactgaaggcagcgacc 315 || || ||||| ||||| || | ||||| || ||||| || || |||||||| || ||| Sbjct: 2803 ccgacgaacttccctgcctggatacccatcttgacgacgccggggctgaaggccgcaacc 2744 Query: 316 aggctcaccttaccgtctcctggacttgaacctaaaatcaccgcggctgggtcttggaga 375 | ||| ||||| || || || || ||||| ||||| ||||||||||| ||||||| || Sbjct: 2743 aagctgaccttgccatcgcccgggcttgagcctaagatcaccgcggcagggtcttcaagg 2684 Query: 376 gttcccacaagatgctcggctgcgcttttcagcccatcagcatccacatcccccatgttc 435 || |||| |||| ||| || ||||| ||||| ||||| || |||||||| ||||||||| Sbjct: 2683 gtgtccacgagatactccgcggcgctcttcagaccatcggcgtccacatcacccatgttc 2624 Query: 436 tcaac 440 ||||| Sbjct: 2623 tcaac 2619
>emb|BX284619.11| Zebrafish DNA sequence from clone DKEY-251E24 in linkage group 1, complete sequence Length = 196931 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 10 gaataaacaatttatataaacccagaa 36 |||||||||||||||||| |||||||| Sbjct: 106075 gaataaacaatttatatatacccagaa 106101
>emb|BX005212.7| Zebrafish DNA sequence from clone DKEY-221H2 in linkage group 1, complete sequence Length = 272535 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 10 gaataaacaatttatataaacccagaa 36 |||||||||||||||||| |||||||| Sbjct: 123951 gaataaacaatttatatatacccagaa 123977
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgca 239 ||||||||||||||||||||| Sbjct: 118745 gccgccaccacctccgccgca 118725
>ref|XM_677403.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9226.2), mRNA Length = 7680 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 58 gcttgtgaatgcatgctctatttcc 82 ||||||||||||| ||||||||||| Sbjct: 6279 gcttgtgaatgcaggctctatttcc 6255
>emb|AL596166.1| Listeria innocua Clip11262 complete genome, segment 4/12 Length = 260050 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 agataccgctgcaacaatttc 146 ||||||||||||||||||||| Sbjct: 209768 agataccgctgcaacaatttc 209748
>emb|BX323590.8| Zebrafish DNA sequence from clone CH211-42I9 in linkage group 1, complete sequence Length = 178876 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 tatataaacccagaaaatggcaaca 46 |||||||||| |||||||||||||| Sbjct: 67215 tatataaacctagaaaatggcaaca 67191
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 acaagatgctcggctgcgctt 402 ||||||||||||||||||||| Sbjct: 2807893 acaagatgctcggctgcgctt 2807913
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgca 239 ||||||||||||||||||||| Sbjct: 2342746 gccgccaccacctccgccgca 2342726
>emb|BX001036.12| Zebrafish DNA sequence from clone CH211-155G22 in linkage group 1, complete sequence Length = 178860 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 tatataaacccagaaaatggcaaca 46 |||||||||| |||||||||||||| Sbjct: 72536 tatataaacctagaaaatggcaaca 72512
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgca 239 ||||||||||||||||||||| Sbjct: 2350527 gccgccaccacctccgccgca 2350507
>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence Length = 181148 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 179156 gccgccaccacctccgccgc 179137
>ref|NM_105066.1| Arabidopsis thaliana unknown protein AT1G63930 mRNA, complete cds Length = 1248 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 573 gccgccaccacctccgccgc 554
>ref|NM_104593.3| Arabidopsis thaliana DNA binding / transcription factor AT1G58110 transcript variant AT1G58110.1 mRNA, complete cds Length = 1631 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 cagaaaatggcaacaattttacat 55 |||||||||||||||| ||||||| Sbjct: 1593 cagaaaatggcaacaactttacat 1570
>ref|NM_001036128.1| Arabidopsis thaliana DNA binding / transcription factor AT1G58110 transcript variant AT1G58110.2 mRNA, complete cds Length = 1725 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 cagaaaatggcaacaattttacat 55 |||||||||||||||| ||||||| Sbjct: 1687 cagaaaatggcaacaactttacat 1664
>gb|AC127375.3| Mus musculus chromosome UNKNOWN clone RP23-48J17, complete sequence Length = 160811 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 aataaacaatttatataaac 30 |||||||||||||||||||| Sbjct: 98686 aataaacaatttatataaac 98705
>gb|BT023938.1| Drosophila melanogaster RE04201 full insert cDNA Length = 6378 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 ttgccgccaccacctccgccgcaa 240 |||||||||||||| ||||||||| Sbjct: 2013 ttgccgccaccaccgccgccgcaa 2036
>gb|AC132211.1| Caenorhabditis elegans cosmid Y108F1, complete sequence Length = 25545 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 4981 gccgccaccacctccgccgc 4962
>emb|CR751601.8| Zebrafish DNA sequence from clone CH211-162E3 in linkage group 14, complete sequence Length = 141943 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 cacaaacttgcctgcttgca 277 |||||||||||||||||||| Sbjct: 7847 cacaaacttgcctgcttgca 7828
>gb|AC129017.4| Mus musculus BAC clone RP24-414A24 from chromosome 15, complete sequence Length = 153547 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tctatttcctatgtatgtaa 93 |||||||||||||||||||| Sbjct: 45609 tctatttcctatgtatgtaa 45590
>emb|Z81008.1|HS369O24 Human DNA sequence from clone RP3-369O24 on chromosome X Contains part of the ODZ1 gene for odz, odd Oz/ten-m homolog 1(Drosophila), complete sequence Length = 110180 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 aataaacaatttatataaac 30 |||||||||||||||||||| Sbjct: 46229 aataaacaatttatataaac 46210
>emb|AL512292.5| Human DNA sequence from clone RP11-292O17 on chromosome 1 Contains a ribosomal protein L31 (RPL31) pseudogene, complete sequence Length = 135389 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 tataaacccagaaaatggca 43 |||||||||||||||||||| Sbjct: 91338 tataaacccagaaaatggca 91319
>emb|Y18475.1|OAY18475 Orycteropus afer complete mitochondrial genome Length = 16816 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 aatttatataaacccagaaa 37 |||||||||||||||||||| Sbjct: 2618 aatttatataaacccagaaa 2637
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 3913015 gccgccaccacctccgccgc 3912996
>emb|BX294145.1| Pirellula sp. strain 1 complete genome; segment 13/24 Length = 300350 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ccgcaaagtttcgctattcc 254 |||||||||||||||||||| Sbjct: 5791 ccgcaaagtttcgctattcc 5772
>emb|AL596256.14| Mouse DNA sequence from clone RP23-259D24 on chromosome 11, complete sequence Length = 169405 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 45066 gccgccaccacctccgccgc 45047
>emb|BX927401.14| Zebrafish DNA sequence from clone CH211-210H11 in linkage group 19, complete sequence Length = 137958 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 22212 gccgccaccacctccgccgc 22231
>dbj|D86546.1| Drosophila melanogaster mRNA for still life type 2, complete cds Length = 9233 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 849 gccgccaccacctccgccgc 830
>gb|AC023691.3| Drosophila melanogaster X BAC RP98-12H1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179892 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 51419 gccgccaccacctccgccgc 51400
>gb|AF107100.2| Ecotropis obliqua NPV Eo-Ld128, Eo-Ld127, ecdysteroid UDP-glucosyltransferase (egt), Eo-Ld124, late expression factor1 (Eo-lef1), 38.7K protein, ribonucleotide reductase (Eo-rr1), polyhedrin (Eo-ORF1), virus replication-essential protein (Eo-ORF2), protein kinase (Eo-ORF3), and hoar genes, complete cds Length = 15528 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 13714 gccgccaccacctccgccgc 13695
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 3399177 gccgccaccacctccgccgc 3399158
>ref|NM_165168.1| Drosophila melanogaster CG31738-RA, transcript variant A (CG31738), mRNA Length = 4772 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 ttgccgccaccacctccgccgcaa 240 |||||||||||||| ||||||||| Sbjct: 406 ttgccgccaccaccgccgccgcaa 429
>ref|NM_135957.2| Drosophila melanogaster CG31738-RB, transcript variant B (CG31738), mRNA Length = 5425 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 ttgccgccaccacctccgccgcaa 240 |||||||||||||| ||||||||| Sbjct: 1059 ttgccgccaccaccgccgccgcaa 1082
>gb|AY094813.1| Drosophila melanogaster LD30602 full insert cDNA Length = 4758 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 ttgccgccaccacctccgccgcaa 240 |||||||||||||| ||||||||| Sbjct: 376 ttgccgccaccaccgccgccgcaa 399
>ref|NM_132535.2| Drosophila melanogaster Selenoprotein G CG1844-RA (SelG), mRNA Length = 835 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 336 gccgccaccacctccgccgc 317
>gb|AC008158.16| Homo sapiens chromosome 17, clone RP11-42F20, complete sequence Length = 148110 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 48612 gccgccaccacctccgccgc 48593
>dbj|AK141597.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630038K16 product:sarcolemma associated protein, full insert sequence Length = 4617 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 82 gccgccaccacctccgccgc 63
>dbj|AK166396.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length enriched library, clone:G930008I16 product:sarcolemma associated protein, full insert sequence Length = 2418 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 82 gccgccaccacctccgccgc 63
>dbj|AK164911.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030019G02 product:sarcolemma associated protein, full insert sequence Length = 2417 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 81 gccgccaccacctccgccgc 62
>dbj|AK221458.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL07-28-D21 Length = 1453 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 609 gccgccaccacctccgccgc 590
>emb|CR390511.1| Gallus gallus finished cDNA, clone ChEST788a9 Length = 932 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 46 aattttacatatgcttgtgaatgcatgc 73 |||||||||| ||| ||||||||||||| Sbjct: 891 aattttacatctgcatgtgaatgcatgc 918
>gb|AC093097.1| Drosophila melanogaster, chromosome 2L, region 36A-36B, BAC clone BACR26O03, complete sequence Length = 175413 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 ttgccgccaccacctccgccgcaa 240 |||||||||||||| ||||||||| Sbjct: 30679 ttgccgccaccaccgccgccgcaa 30702
>gb|AF396454.1|AF396454 Drosophila melanogaster G-rich selenoprotein mRNA, complete cds Length = 849 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 336 gccgccaccacctccgccgc 317
>gb|BT023455.1| Arabidopsis thaliana At1g63930 gene, complete cds Length = 1382 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 583 gccgccaccacctccgccgc 564
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 2443745 gccgccaccacctccgccgc 2443726
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 caatttcagctctagccttctcta 163 ||||||||||||||||||| |||| Sbjct: 7062777 caatttcagctctagccttttcta 7062754
>emb|BX816740.1|CNS0AELN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZD05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1726 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 cagaaaatggcaacaattttacat 55 |||||||||||||||| ||||||| Sbjct: 1685 cagaaaatggcaacaactttacat 1662
>gb|AC010852.7|AC010852 Arabidopsis thaliana chromosome 1 BAC T12P18 genomic sequence, complete sequence Length = 79469 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 12213 gccgccaccacctccgccgc 12232
>gb|AC079131.4|AC079131 Arabidopsis thaliana chromosome 1 BAC T18I24 genomic sequence, complete sequence Length = 85961 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 cagaaaatggcaacaattttacat 55 |||||||||||||||| ||||||| Sbjct: 4991 cagaaaatggcaacaactttacat 5014
>gb|AC079604.5|AC079604 Arabidopsis thaliana chromosome 1 BAC T15M6 genomic sequence, complete sequence Length = 103637 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 cagaaaatggcaacaattttacat 55 |||||||||||||||| ||||||| Sbjct: 77369 cagaaaatggcaacaactttacat 77392
>gb|AC006214.1|AC006214 Drosophila melanogaster, chromosome 2L, region 36A7-36A13, P1 clones DS04680 and DS00592, complete sequence Length = 129779 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 ttgccgccaccacctccgccgcaa 240 |||||||||||||| ||||||||| Sbjct: 62588 ttgccgccaccaccgccgccgcaa 62611
>gb|BT003980.1| Arabidopsis thaliana clone RAFL15-22-D03 (R20596) putative bZIP family transcription factor (At1g58110) mRNA, complete cds Length = 1648 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 cagaaaatggcaacaattttacat 55 |||||||||||||||| ||||||| Sbjct: 1595 cagaaaatggcaacaactttacat 1572
>gb|AY060611.1| Drosophila melanogaster GH03581 full insert cDNA Length = 849 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 336 gccgccaccacctccgccgc 317
>dbj|AP005516.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066H10 Length = 200968 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 caatttcagctctagccttctcta 163 ||||||||||||||||||| |||| Sbjct: 89466 caatttcagctctagccttttcta 89443
>dbj|AK122055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114K20, full insert sequence Length = 1545 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 176 gccgccaccacctccgccgc 157
>ref|XM_308787.2| Anopheles gambiae str. PEST ENSANGP00000015166 (ENSANGG00000012677), mRNA Length = 1096 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 244 gccgccaccacctccgccgc 225
>emb|BX539333.2| Mouse DNA sequence from clone RP23-138J24 on chromosome X, complete sequence Length = 212455 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 aataaacaatttatataaac 30 |||||||||||||||||||| Sbjct: 162465 aataaacaatttatataaac 162484
>gb|L33180.1|NPHT3COMP Bombyx mori nuclear polyhedrosis virus isolate T3, complete genome Length = 128413 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 1554 gccgccaccacctccgccgc 1535
>gb|AE003652.2| Drosophila melanogaster chromosome 2L, section 61 of 83 of the complete sequence Length = 262525 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 ttgccgccaccacctccgccgcaa 240 |||||||||||||| ||||||||| Sbjct: 41713 ttgccgccaccaccgccgccgcaa 41736
>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete sequence Length = 308317 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 178860 gccgccaccacctccgccgc 178841
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 2443689 gccgccaccacctccgccgc 2443670
>emb|AL928755.5|CNS08CBS Oryza sativa chromosome 12, . BAC OSJNBb0050K10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 122901 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 99747 gccgccaccacctccgccgc 99766
>gb|AC132111.4| Mus musculus BAC clone RP24-200H19 from 14, complete sequence Length = 174164 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 gccgccaccacctccgccgc 238 |||||||||||||||||||| Sbjct: 79625 gccgccaccacctccgccgc 79644
>gb|U97338.1|OAU97338 Orycteropus afer 12S ribosomal RNA, tRNA-Val and 16S ribosomal RNA genes, mitochondrial genes encoding mitochondrial RNAs, complete sequence Length = 2601 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 aatttatataaacccagaaa 37 |||||||||||||||||||| Sbjct: 2551 aatttatataaacccagaaa 2570
>emb|AL672208.11| Mouse DNA sequence from clone RP23-318H23 on chromosome 9, complete sequence Length = 117535 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 agaaaatggcaacaatttta 52 |||||||||||||||||||| Sbjct: 103034 agaaaatggcaacaatttta 103015 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,349,981 Number of Sequences: 3902068 Number of extensions: 4349981 Number of successful extensions: 89357 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89010 Number of HSP's gapped (non-prelim): 347 length of query: 493 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 471 effective length of database: 17,147,199,772 effective search space: 8076331092612 effective search space used: 8076331092612 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
