>WRT1_CAEEL (Q94128) Warthog protein 1 precursor [Contains: Warthog protein 1|
           N-product; Warthog protein 1 C-product]
          Length = 485

 Score = 32.7 bits (73), Expect = 0.37
 Identities = 18/61 (29%), Positives = 25/61 (40%)
 Frame = +2

Query: 242 SAHLGPELLPAKIEQFPQGASLIHAGAPACFGRLQHRREFAHQDIGHPCVSFWNQSDASS 421
           SA  G   +P + E  P G  ++  G+P CFG     R+  H        SF   +D   
Sbjct: 21  SASCGSSGIPFRFEVLPSGQPVLGCGSPTCFGAENGGRDLRHDS------SFMAGADGDD 74

Query: 422 G 424
           G
Sbjct: 75  G 75

>TOP3_SALTI (Q8Z6F5) DNA topoisomerase 3 (EC 5.99.1.2) (DNA topoisomerase III)|
          Length = 649

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 356 PGGAEASQSTPEHRHGSEKPPAE 288
           PGG E  +S P  R G + PPAE
Sbjct: 620 PGGGEKKKSAPRKRAGKKSPPAE 642

>HEMA_IAEN7 (P03440) Hemagglutinin precursor [Contains: Hemagglutinin HA1|
           chain; Hemagglutinin HA2 chain]
          Length = 566

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 48  QEGRSYKCKPVPDNRYFSKTN 110
           Q G SY CK  PDN +FS+ N
Sbjct: 148 QNGGSYACKRGPDNSFFSRLN 168

>KHSE_METGL (O32378) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)|
          Length = 318

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 20/66 (30%), Positives = 26/66 (39%)
 Frame = +2

Query: 179 AIHHIAQCTTMSLIAWP*FSPSAHLGPELLPAKIEQFPQGASLIHAGAPACFGRLQHRRE 358
           A H +   T     AWP     A +   L       FPQ   LIHA  PA F R+  +  
Sbjct: 246 AYHAVRPLTEEEHAAWPGMLRVAGIRFWLSRLNDLHFPQAGELIHAKDPAYFERILRKAI 305

Query: 359 FAHQDI 376
            A + +
Sbjct: 306 AAREQL 311

>CEF1_YEAST (Q03654) Pre-mRNA-splicing factor CEF1 (PRP19-associated complex|
           protein 85) (PRP nineteen-associated complex protein 85)
          Length = 590

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = -2

Query: 380 DRYLDEQTPGGAEASQSTPEHRHGSEKPPAETVQSLQAATQVPDELK---AKIRAMLLET 210
           +R L+ +  GGA  S    + + G   P AET  +      + DE K   A+ RA LL T
Sbjct: 103 NRLLESEDSGGAALSTGVTDLKAGDINPNAETQMARPDNGDLEDEEKEMLAEARARLLNT 162

>PSD2_MOUSE (Q8VDM4) 26S proteasome non-ATPase regulatory subunit 2 (26S|
           proteasome regulatory subunit RPN1) (26S proteasome
           regulatory subunit S2) (26S proteasome subunit p97)
          Length = 908

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 23/66 (34%), Positives = 31/66 (46%)
 Frame = -2

Query: 359 TPGGAEASQSTPEHRHGSEKPPAETVQSLQAATQVPDELKAKIRAMLLETL*YIVQCDVS 180
           TP GA+   S  E R   EK   + +   +   Q+ DEL+     ML+E L    + D S
Sbjct: 20  TPSGADEKSSGKERRDAGEKDKEQELS--EEDKQLQDELE-----MLVERL---GEKDTS 69

Query: 179 LYYPVL 162
           LY P L
Sbjct: 70  LYRPAL 75

>CCBP2_RAT (O09027) Chemokine-binding protein 2 (Chemokine-binding protein D6)|
           (C-C chemokine receptor D6) (CCR10-related receptor)
          Length = 382

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
 Frame = -2

Query: 167 VLLHSV--------LYLLKFSS---LFCSSICLAKISIVWHWFAFIASALLCWRTQKHYS 21
           VLLHSV        LYLL  +    LF  ++    IS+ WHW   +  + LC      YS
Sbjct: 69  VLLHSVPQRRRMIELYLLNLAVSNLLFVVTMPFWAISVAWHW---VFGSFLCKVVSTLYS 125

Query: 20  I 18
           I
Sbjct: 126 I 126

>HMEN_ANOGA (O02491) Segmentation polarity homeobox protein engrailed|
          Length = 596

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 344 EASQSTPEHRHGSEKPPAETVQSLQAATQVP 252
           +++ S P H H S+ P + T  ++  A+ VP
Sbjct: 10  QSAPSPPHHHHSSQSPTSTTTVTMATASPVP 40

>GLNE_RHOPA (Q6N8H0) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)|
           ([Glutamate--ammonia-ligase] adenylyltransferase)
           (Glutamine-synthetase adenylyltransferase) (ATase)
          Length = 990

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = -2

Query: 335 QSTPEHRHGSEKPPAETVQSLQAATQVPDELKAKIRAMLLETL*YIVQCDVSLYYPVL 162
           +  PE R       AET     AA    DE+ A +R +  E    I  CD+   +PV+
Sbjct: 90  RGAPEQRLAKLLEDAET---FVAAASAEDEVMAALRRLKAEAALLIALCDIGGIWPVM 144

>HEMA_IAEN6 (P04664) Hemagglutinin [Contains: Hemagglutinin HA1 chain]|
           (Fragment)
          Length = 328

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 48  QEGRSYKCKPVPDNRYFSKTNA*TK*GTEF*QIKHRMEKN 167
           Q G S  CK  PD+ +FS+ N  TK G+ +  +   M  N
Sbjct: 132 QNGGSNACKRGPDSGFFSRLNWLTKSGSTYPVLNVTMPNN 171

>HEMA_IANT6 (P03436) Hemagglutinin precursor [Contains: Hemagglutinin HA1|
           chain; Hemagglutinin HA2 chain]
          Length = 566

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 48  QEGRSYKCKPVPDNRYFSKTNA*TK*GTEF*QIKHRMEKN 167
           Q G S  CK  PD+ +FS+ N  TK G+ +  +   M  N
Sbjct: 148 QNGGSNACKRGPDSGFFSRLNWLTKSGSTYPVLNVTMPNN 187


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,183,535
Number of Sequences: 219361
Number of extensions: 1277189
Number of successful extensions: 3451
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3450
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)