ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl30d12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LGT_CITUN (Q9MB73) Limonoid UDP-glucosyltransferase (EC 2.4.1.21... 30 2.9
2LAC9_KLULA (P08657) Lactose regulatory protein LAC9 29 6.6

>LGT_CITUN (Q9MB73) Limonoid UDP-glucosyltransferase (EC 2.4.1.210) (Limonoid|
           glucosyltransferase) (Limonoid GTase) (LGTase)
          Length = 511

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
 Frame = +3

Query: 126 PFIP-----AEDISLTVL*RNNSNRINVP*CSCLAKYFHGASNLIDYPNKQRIEFKTSRN 290
           PFIP     AE + L       S  + V  C+C A Y+H    L+ +P+++  E     +
Sbjct: 122 PFIPWVSDVAESLGLP------SAMLWVQSCACFAAYYHYFHGLVPFPSEKEPEI----D 171

Query: 291 VASPCM 308
           V  PCM
Sbjct: 172 VQLPCM 177



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>LAC9_KLULA (P08657) Lactose regulatory protein LAC9|
          Length = 865

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +1

Query: 253 QTNNASNSKLPEMWHLLV*SLIPPSAYCSTKCRTH 357
           Q N+    +  E+WH+L+ +++   ++CS  C +H
Sbjct: 411 QYNDQIKPENVEIWHILLNAVLALGSWCSNSCSSH 445


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,315,801
Number of Sequences: 219361
Number of extensions: 1260997
Number of successful extensions: 3038
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3038
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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