Clone Name | rbastl30d09 |
---|---|
Clone Library Name | barley_pub |
>MEF2C_MOUSE (Q8CFN5) Myocyte-specific enhancer factor 2C| Length = 474 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +2 Query: 233 GHHHQHFQKNPPLL*PQIGACPSLHLIKLNN 325 G QH PP Q+GAC S HL + +N Sbjct: 349 GWQQQHLHNMPPSALSQLGACTSTHLSQSSN 379
>MEF2C_HUMAN (Q06413) Myocyte-specific enhancer factor 2C| Length = 473 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +2 Query: 233 GHHHQHFQKNPPLL*PQIGACPSLHLIKLNN 325 G QH PP Q+GAC S HL + +N Sbjct: 349 GWQQQHLHNMPPSALSQLGACTSTHLSQSSN 379
>ALA6_ARATH (Q9SLK6) Putative phospholipid-transporting ATPase 6 (EC 3.6.3.1)| (Aminophospholipid flippase 6) Length = 1244 Score = 29.6 bits (65), Expect = 2.0 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Frame = -1 Query: 192 KSGKNYLGSHSSMSNVFAH-GISELVMRYTDAVSTVITLITSLFHPCK 52 KSGK YLG+ S NV+ G+ L + Y T S FH K Sbjct: 661 KSGKEYLGATSKHLNVYGEAGLRTLALGYRKLDETEYAAWNSEFHKAK 708
>FOXGB_CHICK (Q90964) Forkhead box protein G1B (Forkhead-related protein FKHL1)| (Transcription factor BF-1) (Brain factor 1) (BF1) (CBF-1) (Proto-oncogene C-QIN) (N-62-5) (CEQ 3-1) Length = 451 Score = 28.9 bits (63), Expect = 3.3 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = +2 Query: 218 NQKHPGHHHQHFQKNPP 268 N HP HHH H +PP Sbjct: 40 NSHHPHHHHHHHHHHPP 56
>QIN_AVIS3 (P56260) Transforming protein Qin (Oncogene Qin)| Length = 387 Score = 28.9 bits (63), Expect = 3.3 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = +2 Query: 218 NQKHPGHHHQHFQKNPP 268 N HP HHH H +PP Sbjct: 40 NSHHPHHHHHHHHHHPP 56
>YCF2_PSINU (Q8WHW9) Protein ycf2| Length = 2313 Score = 27.7 bits (60), Expect = 7.4 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -1 Query: 201 PH*KSGKNYLGSHSSMSNVFAHGISELVMRYTDAVSTVITLI 76 PH K KN+L +HSS+ F H S++ VS + L+ Sbjct: 912 PHLKYIKNFLFNHSSILEQFWHNRSDISRDLGSQVSNKLVLL 953
>METK_METKA (Q8TV85) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) Length = 397 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = -1 Query: 189 SGKNYLGSHSSMSNVFAHGISELVMRYTDAVSTVITLITSLFHPCKLP 46 +GKN + + NV AH ++ + T A + L++ + HP P Sbjct: 305 AGKNPVNHVGKLYNVLAHQMAREIYEETSADEVYVRLLSQIGHPIDDP 352
>WRK18_ARATH (Q9C5T4) WRKY transcription factor 18 (WRKY DNA-binding protein 18)| (AtWRKY18) Length = 310 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +2 Query: 209 ASTNQKHPGHHHQHFQKN 262 +S+N+ H HH QH QKN Sbjct: 124 SSSNEDHHHHHQQHEQKN 141
>TF2AA_MOUSE (Q99PM3) Transcription initiation factor IIA subunit 1 (General| transcription factor IIA1) [Contains: Transcription initiation factor IIA alpha chain (TFIIA p35 subunit); Transcription initiation factor IIA beta chain (TFIIA p19 subunit)] Length = 378 Score = 27.3 bits (59), Expect = 9.7 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = +2 Query: 221 QKHPGHHHQHFQKNPPLL*PQ 283 Q+H HHHQH Q P PQ Sbjct: 79 QQHHHHHHQHQQAQPQQTVPQ 99 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,871,008 Number of Sequences: 219361 Number of extensions: 602474 Number of successful extensions: 1468 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1318 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1431 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)