>PDCD1_HUMAN (Q15116) Programmed cell death protein 1 precursor (Protein PD-1)|
           (hPD-1) (CD279 antigen)
          Length = 288

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +2

Query: 89  WIPEIKRQALKIIVQYSHHT-TCSMNNATK-FVLNWYKILVNNGT 217
           W P     AL ++ +  + T TCS +N ++ FVLNWY++  +N T
Sbjct: 32  WNPPTFFPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQT 76

>ATX1_PLAFA (Q04956) Probable cation-transporting ATPase 1 (EC 3.6.3.-)|
          Length = 1956

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
 Frame = +1

Query: 22   NETNSRWYRSISRTVNNDTTVPLDTRNQTPGSQNYSTILPSYDMLNEQ--CDQICTQLVQ 195
            N  N  ++R     +N D +  +        +     I  +Y +L E   C    +++  
Sbjct: 755  NNCNDTYHRLEYHNINKDNSFNIPPEKNKSYNNISEHIKINYPLLFEALACCHTLSKVNN 814

Query: 196  NISQQWYKILTVSFVICKITLGSNSYFLILTYSTCKFNFPRL 321
             I     +IL  +F  C + + +NS+ +      C ++F ++
Sbjct: 815  KIMGDVLEILMFNFTNCDMLINNNSFIIKEKKKNCSYDFQKI 856

>NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 precursor (Notch 2)|
            (hN2) [Contains: Notch 2 extracellular truncation; Notch
            2 intracellular domain]
          Length = 2471

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 121  NYSTILPSYDMLNEQCDQIC 180
            N S+ LP +D +N QCD++C
Sbjct: 1465 NCSSPLPCWDYINNQCDELC 1484

>ATM_ARATH (Q9M3G7) Serine/threonine-protein kinase ATM (EC 2.7.11.1) (Ataxia|
            telangiectasia mutated homolog) (AtATM)
          Length = 3856

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
 Frame = +1

Query: 115  SQNYSTIL-----PSYDMLNEQCDQICTQLVQNISQQWYKI 222
            S N  TIL     P+  +  EQ  +IC +LV   SQ W+ +
Sbjct: 3166 SSNSRTILEKYLRPAVSLAEEQSSKICKRLVDRQSQTWFHL 3206

>YE86_MYCAV (O07402) Hypothetical protein MAV321|
          Length = 306

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +1

Query: 1   SLMPTKRNETNSRWYRSISRTVNNDTTVPLDTRNQTPGSQ 120
           +L+ T R++  +   R+ +RT+N    VP D R   PG+Q
Sbjct: 63  TLLQTARHDRRAGGLRTDARTINVVLPVPGDVRGLAPGTQ 102

>T2R39_PAPHA (Q646F0) Taste receptor type 2 member 39 (T2R39)|
          Length = 338

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +2

Query: 8   CPRNETKQTAAGIEVFLELSTMTLQSLWIPEI 103
           C +N++  T+  I VFL +S + LQSL + EI
Sbjct: 63  CVQNKSVSTSGRILVFLSVSRIALQSLMMLEI 94

>BZZ1_YEAST (P38822) Protein BZZ1|
          Length = 633

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
 Frame = +1

Query: 70  NDTTVPL---DTRNQTPGSQN------YSTILPSYDMLNEQCDQICTQLVQNISQQWYKI 222
           + T+VP+   DT   TPGS        ++ IL   DM+++  DQ+ T    +++ Q   +
Sbjct: 62  SSTSVPISVGDTPTTTPGSIEAAGVVAWNEILSQTDMISKDHDQLSTDFENHVANQLSGL 121

Query: 223 LT 228
            T
Sbjct: 122 FT 123


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,948,355
Number of Sequences: 219361
Number of extensions: 911018
Number of successful extensions: 2088
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2087
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)