ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl30d05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ATX1_ARATH (Q9C5X4) Histone-lysine N-methyltransferase, H3 lysin... 33 0.27
2ATX2_ARATH (Q9MA43) Histone-lysine N-methyltransferase ATX2 (EC ... 31 1.3

>ATX1_ARATH (Q9C5X4) Histone-lysine N-methyltransferase, H3 lysine-4 specific|
            ATX1 (EC 2.1.1.43) (H3-K4-HMTase) (Trithorax-homolog
            protein 1) (TRX-homolog protein 1) (Protein SET DOMAIN
            GROUP 27)
          Length = 1062

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 16/24 (66%), Positives = 17/24 (70%)
 Frame = -2

Query: 458  CRGVVNDVEAEVQSTKIRVTRSEL 387
            CRGVVND EAE Q  KI V R +L
Sbjct: 1033 CRGVVNDTEAEEQHAKICVPRCDL 1056



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>ATX2_ARATH (Q9MA43) Histone-lysine N-methyltransferase ATX2 (EC 2.1.1.43)|
            (Trithorax-homolog protein 2) (TRX-homolog protein 2)
            (Protein SET DOMAIN GROUP 30)
          Length = 1193

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -2

Query: 461  KCRGVVNDVEAEVQSTKIRVTRS 393
            +CRGVVND EAE +   I  +RS
Sbjct: 1030 RCRGVVNDTEAEERQANIHASRS 1052


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,815,944
Number of Sequences: 219361
Number of extensions: 1173319
Number of successful extensions: 2107
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2107
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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