>gb|AY106536.1| Zea mays PCO128034 mRNA sequence
          Length = 814

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                       
Query: 374 cagatggggcaggtgttcttgatcaccagccactgcttgatgcattccgtgtggaagtag 433
           |||||||||||   |||||| | ||||||||| |||||||||||  | | |||||||| |
Sbjct: 448 cagatggggcacacgttcttcaccaccagccattgcttgatgcagccagcgtggaagtcg 389

                        
Query: 434 tgcccgcactcca 446
           |||||||| ||||
Sbjct: 388 tgcccgcagtcca 376

>gb|AC158987.3| Mus musculus BAC clone RP23-366K1 from chromosome 9, complete sequence
          Length = 222125

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 24     caatgtcatttcaataaattttg 46
              |||||||||||||||||||||||
Sbjct: 133817 caatgtcatttcaataaattttg 133795

>emb|AL158075.11| Human DNA sequence from clone RP11-348K2 on chromosome 9q33.1-34.13
             Contains two novel genes and part of the NR6A1 gene for
             nuclear receptor (subfamily 6, group A) member 1, complete
             sequence
          Length = 102867

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 208   tcttgggaggaggaaaagagg 228
             |||||||||||||||||||||
Sbjct: 32245 tcttgggaggaggaaaagagg 32265

>gb|AC113352.2| Homo sapiens chromosome 5 clone CTD-2613O8, complete sequence
          Length = 133668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 13     ttaaaatggaacaatgtcatt 33
              |||||||||||||||||||||
Sbjct: 104111 ttaaaatggaacaatgtcatt 104131

>gb|AC005966.2|T2K10 Arabidopsis thaliana chromosome 1 BAC T2K10 sequence, complete sequence
          Length = 90284

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 31    atttcaataaattttgaatat 51
             |||||||||||||||||||||
Sbjct: 50723 atttcaataaattttgaatat 50703

>gb|AC017031.10| Homo sapiens BAC clone RP11-289K3 from 2, complete sequence
          Length = 151903

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 275   aggggggaacaggggagggag 295
             |||||||||||||||||||||
Sbjct: 41465 aggggggaacaggggagggag 41485

>emb|AL929433.10| Mouse DNA sequence from clone RP23-193M23 on chromosome 4, complete
             sequence
          Length = 198426

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 74    aagcagaaaccaactccatcc 94
             |||||||||||||||||||||
Sbjct: 80779 aagcagaaaccaactccatcc 80799

>gb|AC162799.4| Mus musculus BAC clone RP24-392E13 from chromosome 3, complete sequence
          Length = 177586

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    atgtcatttcaataaatttt 45
             ||||||||||||||||||||
Sbjct: 93508 atgtcatttcaataaatttt 93527

>gb|AC097023.6| Rattus norvegicus BAC CH230-35L12 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 228433

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    caatgtcatttcaataaatt 43
             ||||||||||||||||||||
Sbjct: 34327 caatgtcatttcaataaatt 34308

>gb|AC105968.14| Mus musculus chromosome 18, clone RP23-265P4, complete sequence
          Length = 210819

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     tcatttcaataaattttgaa 48
              ||||||||||||||||||||
Sbjct: 208398 tcatttcaataaattttgaa 208379

>ref|XM_584630.2| PREDICTED: Bos taurus similar to Protein C8orf1 (hT41), transcript
            variant 1 (LOC539073), mRNA
          Length = 2535

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 30   catttcaataaattttgaat 49
            ||||||||||||||||||||
Sbjct: 2511 catttcaataaattttgaat 2530

>ref|XM_876550.1| PREDICTED: Bos taurus similar to Protein C8orf1 (hT41), transcript
            variant 4 (LOC539073), mRNA
          Length = 2478

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 30   catttcaataaattttgaat 49
            ||||||||||||||||||||
Sbjct: 2454 catttcaataaattttgaat 2473

>ref|XM_876488.1| PREDICTED: Bos taurus similar to Protein C8orf1 (hT41), transcript
            variant 3 (LOC539073), mRNA
          Length = 2533

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 30   catttcaataaattttgaat 49
            ||||||||||||||||||||
Sbjct: 2509 catttcaataaattttgaat 2528

>gb|AC132351.3| Mus musculus BAC clone RP24-95F24 from chromosome 18, complete sequence
          Length = 186726

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     tcatttcaataaattttgaa 48
              ||||||||||||||||||||
Sbjct: 103438 tcatttcaataaattttgaa 103419

>gb|AC109247.14| Mus musculus chromosome 9, clone RP23-462C14, complete sequence
          Length = 225020

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 87     ctccatccaggtctactacagcca 110
              ||||||||| ||||||||||||||
Sbjct: 127544 ctccatccatgtctactacagcca 127521

>gb|AC108799.9| Mus musculus, clone RP23-119G12, complete sequence
          Length = 228349

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 277    gggggaacaggggagggagg 296
              ||||||||||||||||||||
Sbjct: 123841 gggggaacaggggagggagg 123860

>emb|AL023581.1|HS45I4 Human DNA sequence from clone RP1-45I4 on chromosome 6q24.1-24.3 Contains
              part of a novel gene (FLJ32928), two novel genes, and the
              5' end of the gene for androgen induced protein (AIG-1,
              CGI-103) (includes FLJ10485). Contains a CpG island,
              complete sequence
          Length = 137947

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 25     aatgtcatttcaataaattttgaa 48
              |||||||||| |||||||||||||
Sbjct: 122811 aatgtcatttaaataaattttgaa 122788

>gb|AY509253.1| Ostreid herpesvirus 1, complete genome
          Length = 207439

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    aatgtcatttcaataaattt 44
             ||||||||||||||||||||
Sbjct: 45709 aatgtcatttcaataaattt 45728

>emb|Z38061.1|SC9168 S.cerevisiae chromosome IX cosmid 9168
          Length = 42793

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 4540 accaactccatccagctctactac 4517



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 4342 accaactccatccagctctactac 4319



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 4153 accaactccatccagctctactac 4130



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 4072 accaactccatccagctctactac 4049



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 3991 accaactccatccagctctactac 3968



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 3865 accaactccatccagctctactac 3842



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 3613 accaactccatccagctctactac 3590



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 3523 accaactccatccagctctactac 3500



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 3406 accaactccatccagctctactac 3383



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 3361 accaactccatccagctctactac 3338



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 3316 accaactccatccagctctactac 3293



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 3235 accaactccatccagctctactac 3212

>dbj|AK133247.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4932422C18 product:unclassifiable, full
            insert sequence
          Length = 4367

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 87   ctccatccaggtctactacagcca 110
            ||||||||| ||||||||||||||
Sbjct: 3543 ctccatccatgtctactacagcca 3520

>gb|AC155843.6| Mus musculus 6 BAC RP24-89H23 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 210908

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 31     atttcaataaattttgaatatcat 54
              ||||||||||| ||||||||||||
Sbjct: 169403 atttcaataaagtttgaatatcat 169426

>gb|AC084667.1|CBRG47D17 Caenorhabditis briggsae cosmid G47D17, complete sequence
          Length = 41003

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   gttgcatgcttgttttgccg 249
             ||||||||||||||||||||
Sbjct: 11466 gttgcatgcttgttttgccg 11447

>gb|AE004906.1| Pseudomonas aeruginosa PAO1, section 467 of 529 of the complete
            genome
          Length = 13045

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 393  tgatcaccagccactgcttg 412
            ||||||||||||||||||||
Sbjct: 4324 tgatcaccagccactgcttg 4305

>emb|CR855387.11| Zebrafish DNA sequence from clone DKEY-282H22 in linkage group 3,
             complete sequence
          Length = 106466

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 389   ttcttgatcaccagccactg 408
             ||||||||||||||||||||
Sbjct: 72952 ttcttgatcaccagccactg 72933

>gb|U30626.1|SCU30626 Saccharomyces cerevisiae var. diastaticus glucoamylase (MUC1) gene,
            complete cds
          Length = 7295

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 4839 accaactccatccagctctactac 4862



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 4758 accaactccatccagctctactac 4781



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 4713 accaactccatccagctctactac 4736



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 4668 accaactccatccagctctactac 4691



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 4551 accaactccatccagctctactac 4574



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 4461 accaactccatccagctctactac 4484



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 4209 accaactccatccagctctactac 4232



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 4083 accaactccatccagctctactac 4106



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 4002 accaactccatccagctctactac 4025



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 3921 accaactccatccagctctactac 3944



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 3732 accaactccatccagctctactac 3755



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 82   accaactccatccaggtctactac 105
            ||||||||||||||| ||||||||
Sbjct: 3534 accaactccatccagctctactac 3557

>gb|AC153617.3| Mus musculus 6 BAC RP23-177G20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 199525

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 31     atttcaataaattttgaatatcat 54
              ||||||||||| ||||||||||||
Sbjct: 182794 atttcaataaagtttgaatatcat 182771

>dbj|AP006354.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT16F22, TM0349b,
             complete sequence
          Length = 74471

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 36    aataaattttgaatatcatcaaat 59
             |||||||||| |||||||||||||
Sbjct: 58027 aataaatttttaatatcatcaaat 58004

>gb|M16165.1|YSCS22 Yeast (S.cerevisiae) S1 protein gene, partial
          Length = 1710

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 82  accaactccatccaggtctactac 105
           ||||||||||||||| ||||||||
Sbjct: 9   accaactccatccagctctactac 32


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,029,320
Number of Sequences: 3902068
Number of extensions: 4029320
Number of successful extensions: 86751
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86680
Number of HSP's gapped (non-prelim): 71
length of query: 452
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 430
effective length of database: 17,147,199,772
effective search space: 7373295901960
effective search space used: 7373295901960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)