Clone Name | rbastl30d01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | UR2R_MACMU (Q8HYC3) Urotensin II receptor (UR-II-R) | 29 | 6.2 | 2 | CET1_DEBHA (Q6BND2) mRNA capping enzyme beta subunit (EC 3.1.3.3... | 28 | 8.1 |
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>UR2R_MACMU (Q8HYC3) Urotensin II receptor (UR-II-R)| Length = 389 Score = 28.9 bits (63), Expect = 6.2 Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 10/74 (13%) Frame = +1 Query: 217 WKKQAHYNY-----RTAKLTTVITRHRLVQTSWS---LTS*LKRAYQRACPGSEADPG-- 366 W+ A Y RTA++ +T S + L + L R Y+ G PG Sbjct: 277 WQLLAQYREAPLAPRTARIVNYLTTCLTYGNSCANPFLYTLLTRNYRDHLRGRVRSPGSG 336 Query: 367 GVQGPVPVLLPEAR 408 GV+GPVP L P AR Sbjct: 337 GVRGPVPSLQPRAR 350
>CET1_DEBHA (Q6BND2) mRNA capping enzyme beta subunit (EC 3.1.3.33)| (Polynucleotide 5'-triphosphatase) (mRNA 5'-triphosphatase) (TPase) Length = 476 Score = 28.5 bits (62), Expect = 8.1 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +1 Query: 157 NLLNIPCPSPHHITNSTYQAWKKQAHYNYR 246 NLLN P P+ T T + W + H N+R Sbjct: 40 NLLNDPAPNNELKTKETKKDWSEDEHSNFR 69 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,186,034 Number of Sequences: 219361 Number of extensions: 1071203 Number of successful extensions: 2400 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2341 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2400 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)