ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl30c08 |
|---|---|
| Clone Library Name | barley_pub |
>ENPL_HORVU (P36183) Endoplasmin homolog precursor (GRP94 homolog)| Length = 809 Score = 62.4 bits (150), Expect = 2e-10 Identities = 36/65 (55%), Positives = 36/65 (55%) Frame = -1 Query: 405 ESGFNLPDPKDSASSIYRSVQKSLDLSPDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 226 ESGFNLPDPKD ASSIYRSVQKSLDLSPDAA Q Sbjct: 744 ESGFNLPDPKDFASSIYRSVQKSLDLSPDAAVEEEEEVEEPEVEEKESAKQEAEEPEHEQ 803 Query: 225 YDKDE 211 YDKDE Sbjct: 804 YDKDE 808
>ENPL_CATRO (P35016) Endoplasmin homolog precursor (GRP94 homolog)| Length = 817 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/30 (70%), Positives = 24/30 (80%) Frame = -1 Query: 405 ESGFNLPDPKDSASSIYRSVQKSLDLSPDA 316 ESGF L DPK+ ASSIY SV+ SL +SPDA Sbjct: 751 ESGFMLNDPKEFASSIYDSVKSSLKISPDA 780
>ENPL_ARATH (Q9STX5) Endoplasmin homolog precursor (GRP94 homolog) (Protein| SHEPHERD) (HSP90-like protein 7) Length = 823 Score = 41.2 bits (95), Expect = 6e-04 Identities = 19/30 (63%), Positives = 23/30 (76%) Frame = -1 Query: 405 ESGFNLPDPKDSASSIYRSVQKSLDLSPDA 316 ESGF L DPKD A+ IY SV+ L++SPDA Sbjct: 747 ESGFILTDPKDFAARIYNSVKSGLNISPDA 776
>HSP90_BRUPA (O61998) Heat shock protein 90| Length = 717 Score = 32.0 bits (71), Expect = 0.36 Identities = 14/28 (50%), Positives = 20/28 (71%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPD 319 SGF+L DP+ AS IYR ++ LD++ D Sbjct: 656 SGFSLEDPQLHASRIYRMIKLGLDITED 683
>HSP90_CAEEL (Q18688) Heat shock protein 90 (Abnormal dauer formation protein| 21) Length = 702 Score = 31.6 bits (70), Expect = 0.47 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPD 319 SGF+L +P+ AS IYR ++ LD+ D Sbjct: 644 SGFSLEEPQSHASRIYRMIKLGLDIGDD 671
>PQQD_SILPO (Q5LTB3) Coenzyme PQQ synthesis protein D (Pyrroloquinoline quinone| biosynthesis protein D) Length = 95 Score = 30.8 bits (68), Expect = 0.80 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = -1 Query: 129 RPFLPRGRRLIIDRDTGGFV 70 RP+LPRG RL+ DR GG V Sbjct: 10 RPYLPRGVRLVTDRVRGGIV 29
>HSP90_CAEBR (Q61W58) Heat shock protein 90 (Abnormal dauer formation protein| 21) Length = 706 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPD 319 SGF+L +P+ AS IYR ++ LD+ + Sbjct: 648 SGFSLEEPQSHASRIYRMIKLGLDIGDE 675
>HSP82_MAIZE (Q08277) Heat shock protein 82| Length = 715 Score = 29.3 bits (64), Expect = 2.3 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPDAA 313 SGF+L DP A+ I+R ++ L++ DAA Sbjct: 662 SGFSLDDPNTFAARIHRMLKLGLNIDEDAA 691
>HS90A_CHICK (P11501) Heat shock protein HSP 90-alpha| Length = 728 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPD 319 SGF+L DP+ A+ IYR ++ L + D Sbjct: 670 SGFSLEDPQTHANRIYRMIKLGLGIDED 697
>HS90A_HUMAN (P07900) Heat shock protein HSP 90-alpha (HSP 86) (NY-REN-38| antigen) Length = 731 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPD 319 SGF+L DP+ A+ IYR ++ L + D Sbjct: 673 SGFSLEDPQTHANRIYRMIKLGLGIDED 700
>HS90A_HORSE (Q9GKX7) Heat shock protein HSP 90-alpha (HSP 86) (Fragment)| Length = 719 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPD 319 SGF+L DP+ A+ IYR ++ L + D Sbjct: 664 SGFSLEDPQTHANRIYRMIKLGLGIDED 691
>HS90A_PIG (O02705) Heat shock protein HSP 90-alpha (HSP 86)| Length = 732 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPD 319 SGF+L DP+ A+ IYR ++ L + D Sbjct: 674 SGFSLEDPQTHANRIYRMIKLGLGIDED 701
>HS90A_MOUSE (P07901) Heat shock protein HSP 90-alpha (HSP 86) (Tumor-specific| transplantation 86 kDa antigen) (TSTA) Length = 732 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPD 319 SGF+L DP+ A+ IYR ++ L + D Sbjct: 674 SGFSLEDPQTHANRIYRMIKLGLGIDED 701
>HS90A_CRIGR (P46633) Heat shock protein HSP 90-alpha (HSP 86)| Length = 732 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPD 319 SGF+L DP+ A+ IYR ++ L + D Sbjct: 674 SGFSLEDPQTHANRIYRMIKLGLGIDED 701
>HS90A_BRARE (Q90474) Heat shock protein HSP 90-alpha| Length = 726 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPD 319 SGF L DP+ A+ IYR ++ L + D Sbjct: 668 SGFTLDDPQTHANRIYRMIKLGLGIDDD 695
>ENPL_RABIT (O18750) Endoplasmin (Heat shock protein 90 kDa beta member 1) (94| kDa glucose-regulated protein) (GRP94) (Fragment) Length = 716 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPDA 316 SG+ LPD K I R V+ SL++ PDA Sbjct: 639 SGYLLPDTKAYGDRIERIVRLSLNIDPDA 667
>HS90B_CHICK (Q04619) Heat shock cognate protein HSP 90-beta| Length = 725 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPD 319 SGF+L DP+ ++ IYR ++ L + D Sbjct: 667 SGFSLEDPQTHSNRIYRMIKLGLGIDED 694
>HS90B_BRARE (O57521) Heat shock protein HSP 90-beta| Length = 725 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPD 319 SGF+L DP+ ++ IYR ++ L + D Sbjct: 665 SGFSLDDPQTHSNRIYRMIKLGLGIDED 692
>ENPL_MESAU (P08712) Endoplasmin (Heat shock protein 90 kDa beta member 1) (94| kDa glucose-regulated protein) (GRP94) (Fragment) Length = 400 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPDA 316 SG+ LPD K A I R ++ SL++ P+A Sbjct: 322 SGYLLPDTKAYADRIERMLRLSLNIDPEA 350
>SETD8_DROME (Q9VFK6) Histone-lysine N-methyltransferase, H4 lysine-20 specific| (EC 2.1.1.43) (Histone H4-K20 methyltransferase) (H4-K20-HMTase) (dSET8) Length = 691 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/25 (40%), Positives = 18/25 (72%) Frame = -1 Query: 162 MLDWKCDGFEGRPFLPRGRRLIIDR 88 +L+ +CDG + R F+ +GR ++ DR Sbjct: 549 VLEERCDGLQVRHFMGKGRGVVADR 573
>ENPL_HUMAN (P14625) Endoplasmin precursor (Heat shock protein 90 kDa beta| member 1) (94 kDa glucose-regulated protein) (GRP94) (gp96 homolog) (Tumor rejection antigen 1) Length = 803 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPDA 316 SG+ LPD K I R ++ SL++ PDA Sbjct: 725 SGYLLPDTKAYGDRIERMLRLSLNIDPDA 753
>HS90B_MOUSE (P11499) Heat shock protein HSP 90-beta (HSP 84) (Tumor-specific| transplantation 84 kDa antigen) (TSTA) Length = 723 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPD 319 SGF+L DP+ ++ IYR ++ L + D Sbjct: 665 SGFSLEDPQTHSNRIYRMIKLGLGIDED 692
>HS90B_HUMAN (P08238) Heat shock protein HSP 90-beta (HSP 84) (HSP 90)| Length = 723 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPD 319 SGF+L DP+ ++ IYR ++ L + D Sbjct: 665 SGFSLEDPQTHSNRIYRMIKLGLGIDED 692
>HS90B_HORSE (Q9GKX8) Heat shock protein HSP 90-beta (HSP 84)| Length = 723 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPD 319 SGF+L DP+ ++ IYR ++ L + D Sbjct: 665 SGFSLEDPQTHSNRIYRMIKLGLGIDED 692
>ENPL_PONPY (Q5R6F7) Endoplasmin precursor (Heat shock protein 90 kDa beta| member 1) Length = 804 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPDA 316 SG+ LPD K I R ++ SL++ PDA Sbjct: 725 SGYLLPDTKAYGDRIERMLRLSLNIDPDA 753
>ENPL_PIG (Q29092) Endoplasmin precursor (Heat shock protein 90 kDa beta| member 1) (94 kDa glucose-regulated protein) (GRP94) (gp96 homolog) (98 kDa protein kinase) (PPK 98) (ppk98) Length = 804 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPDA 316 SG+ LPD K I R ++ SL++ PDA Sbjct: 725 SGYLLPDTKAYGDRIERMLRLSLNIDPDA 753
>ENPL_MACFA (Q4R520) Endoplasmin precursor (Heat shock protein 90 kDa beta| member 1) Length = 804 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPDA 316 SG+ LPD K I R ++ SL++ PDA Sbjct: 725 SGYLLPDTKAYGDRIERMLRLSLNIDPDA 753
>ENPL_CANFA (P41148) Endoplasmin precursor (Heat shock protein 90 kDa beta| member 1) (94 kDa glucose-regulated protein) (GRP94) Length = 804 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPDA 316 SG+ LPD K I R ++ SL++ PDA Sbjct: 725 SGYLLPDTKAYGDRIERMLRLSLNIDPDA 753
>ENPL_BOVIN (Q95M18) Endoplasmin precursor (Heat shock protein 90 kDa beta| member 1) (94 kDa glucose-regulated protein) (GRP94) Length = 804 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPDA 316 SG+ LPD K I R ++ SL++ PDA Sbjct: 725 SGYLLPDTKAYGDRIERMLRLSLNIDPDA 753
>HSP83_ANOGA (Q7PT10) Heat shock protein 83| Length = 689 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPD 319 SGF+L +P AS IYR ++ L + D Sbjct: 623 SGFSLDEPGTHASRIYRMIKLGLGIDED 650
>HSP83_TRYBB (P12861) Heat shock protein 83| Length = 703 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -1 Query: 402 SGFNLPDPKDSASSIYRSVQKSLDLSPDA 316 SGF L DP A I+R ++ L L DA Sbjct: 649 SGFTLDDPTAYADRIHRMIKLGLSLDDDA 677
>SUV3_SACDO (O74727) ATP-dependent RNA helicase SUV3, mitochondrial precursor| (EC 3.6.1.-) Length = 737 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +3 Query: 81 PYHDR*LIVFRAVKMDVPQNHHISSPTFLSNEMKAK 188 P+HD+ IV R +++P+N H F N K+K Sbjct: 36 PFHDKNWIVKRPKFLNLPKNEHSKLDVFQFNFNKSK 71
>PGKG_TRYCO (P41762) Phosphoglycerate kinase, glycosomal (EC 2.7.2.3)| Length = 509 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = -2 Query: 152 GNVMVLRDVHFYRAED 105 GNVM+L +V FYR ED Sbjct: 215 GNVMLLENVRFYREED 230 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,088,678 Number of Sequences: 219361 Number of extensions: 539703 Number of successful extensions: 1251 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 1223 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1251 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
