ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl30c08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue 521 e-145
2gb|BT016887.1| Zea mays clone Contig720 mRNA sequence 109 7e-21
3gb|AY103537.1| Zea mays PCO098403 mRNA sequence 109 7e-21
4gb|BT018707.1| Zea mays clone EL01N0516A06.d mRNA sequence 105 1e-19
5gb|BT018144.1| Zea mays clone EL01N0555C04.c mRNA sequence 105 1e-19
6gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic ... 101 2e-18
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
8dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
9dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
10dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
11dbj|AK102478.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
12gb|BT024056.1| Zea mays clone EL01N0440A11 mRNA sequence 101 2e-18
13dbj|AK062023.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
14dbj|AB037681.1| Oryza sativa HSP90 mRNA for heat shock protein 9... 94 4e-16
15gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome... 48 0.022
16dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 44 0.35
17gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 44 0.35
18gb|CP000087.1| Rickettsia bellii RML369-C, complete genome 42 1.4
19emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, stra... 42 1.4
20gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cance... 42 1.4
21ref|NR_002839.1| Mus musculus distal-less homeobox 6, antisense ... 42 1.4
22ref|XM_318677.2| Anopheles gambiae str. PEST ENSANGP00000004639 ... 42 1.4
23gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, comple... 42 1.4
24gb|AF022079.1|AF022079 Mus musculus antisense Dlx-6 mRNA, partia... 42 1.4
25gb|AC122240.4| Mus musculus BAC clone RP23-145L9 from 6, complet... 42 1.4
26gb|AC146297.3| Mus musculus BAC clone RP23-260F15 from chromosom... 40 5.4
27gb|AC125049.3| Mus musculus BAC clone RP23-367C15 from chromosom... 40 5.4
28gb|AC115355.3| Mus musculus BAC clone RP23-14J16 from 9, complet... 40 5.4
29gb|AC007656.2| Homo sapiens 12q22 BAC RPCI11-534P6 (Rowswell Par... 40 5.4
30gb|AC104820.4| Homo sapiens BAC clone RP11-739A13 from 2, comple... 40 5.4
31dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
32dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
33gb|AC002460.1|AC002460 Human BAC clone CTB-191D16, complete sequ... 40 5.4
34emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 i... 40 5.4
35dbj|AP000785.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 5.4
36gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 5.4
37emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 5.4
38emb|AL807382.8| Mouse DNA sequence from clone RP23-434B7 on chro... 40 5.4 
>emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue
          Length = 2682

 Score =  521 bits (263), Expect = e-145
 Identities = 263/263 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    gcacgctaattccaactagctagggtatcgtcattaaacaagaaactaggtacagtagta 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2681 gcacgctaattccaactagctagggtatcgtcattaaacaagaaactaggtacagtagta 2622

                                                                        
Query: 61   cattacacggacaaaaccccccgtatcacgatcgatgattaatcgtcttccgcgcggtaa 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2621 cattacacggacaaaaccccccgtatcacgatcgatgattaatcgtcttccgcgcggtaa 2562

                                                                        
Query: 121  aaatggacgtccctcaaaaccatcacatttccagtccaacatttctttctaatgaaatga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2561 aaatggacgtccctcaaaaccatcacatttccagtccaacatttctttctaatgaaatga 2502

                                                                        
Query: 181  aagctaaatgggcgatatgagcaactacagctcgtccttgtcgtactgctcgtgttccgg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2501 aagctaaatgggcgatatgagcaactacagctcgtccttgtcgtactgctcgtgttccgg 2442

                                   
Query: 241  ctcctccgcctcctgcttggccg 263
            |||||||||||||||||||||||
Sbjct: 2441 ctcctccgcctcctgcttggccg 2419



 Score =  180 bits (91), Expect = 2e-42
 Identities = 94/95 (98%)
 Strand = Plus / Minus

                                                                        
Query: 311  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2371 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 2312

                                               
Query: 371  gagtccttggggtccggcaggttgaacccgctctc 405
             ||||||||||||||||||||||||||||||||||
Sbjct: 2311 aagtccttggggtccggcaggttgaacccgctctc 2277
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>gb|BT016887.1| Zea mays clone Contig720 mRNA sequence
          Length = 719

 Score =  109 bits (55), Expect = 7e-21
 Identities = 85/95 (89%)
 Strand = Plus / Plus

                                                                       
Query: 311 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 370
           ||||| |||||||||||||||||||||||||| |||||||||  ||||||||| ||||| 
Sbjct: 339 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 398

                                              
Query: 371 gagtccttggggtccggcaggttgaacccgctctc 405
            | ||||||||||| || |||||||||||||||||
Sbjct: 399 aactccttggggtcggggaggttgaacccgctctc 433
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>gb|AY103537.1| Zea mays PCO098403 mRNA sequence
          Length = 2806

 Score =  109 bits (55), Expect = 7e-21
 Identities = 85/95 (89%)
 Strand = Plus / Minus

                                                                        
Query: 311  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 370
            ||||| |||||||||||||||||||||||||| |||||||||  ||||||||| ||||| 
Sbjct: 2402 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 2343

                                               
Query: 371  gagtccttggggtccggcaggttgaacccgctctc 405
             | ||||||||||| || |||||||||||||||||
Sbjct: 2342 aactccttggggtcggggaggttgaacccgctctc 2308



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  actacagctcgtccttgtcg 223
            ||||||||||||||||||||
Sbjct: 2503 actacagctcgtccttgtcg 2484
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>gb|BT018707.1| Zea mays clone EL01N0516A06.d mRNA sequence
          Length = 1546

 Score =  105 bits (53), Expect = 1e-19
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                        
Query: 317  gcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgcagagtcc 376
            |||||||||||||||||||||| |||||||||||||  ||||||||| |||||  | |||
Sbjct: 1240 gcgtcggggctcaggtccaggcccttctgcaccgacttgtagatgctggacgcgaactcc 1181

                                         
Query: 377  ttggggtccggcaggttgaacccgctctc 405
            |||||||| || |||||||||||||||||
Sbjct: 1180 ttggggtcggggaggttgaacccgctctc 1152
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>gb|BT018144.1| Zea mays clone EL01N0555C04.c mRNA sequence
          Length = 1544

 Score =  105 bits (53), Expect = 1e-19
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                        
Query: 317  gcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgcagagtcc 376
            |||||||||||||||||||||| |||||||||||||  ||||||||| |||||  | |||
Sbjct: 1226 gcgtcggggctcaggtccaggcccttctgcaccgacttgtagatgctggacgcgaactcc 1167

                                         
Query: 377  ttggggtccggcaggttgaacccgctctc 405
            |||||||| || |||||||||||||||||
Sbjct: 1166 ttggggtcggggaggttgaacccgctctc 1138
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>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete
            sequence
          Length = 143507

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                        
Query: 311  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 370
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 9601 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 9660

                                               
Query: 371  gagtccttggggtccggcaggttgaacccgctctc 405
             |||||||||| || || |||||||| ||||||||
Sbjct: 9661 aagtccttgggatcaggaaggttgaagccgctctc 9695



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 119  aaaaatggacgtccctcaaaaccatcacattt 150
            ||||||||||||||||| ||||||||||||||
Sbjct: 9409 aaaaatggacgtccctcgaaaccatcacattt 9440
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                            
Query: 311      acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 370
                ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 29928895 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 29928954

                                                   
Query: 371      gagtccttggggtccggcaggttgaacccgctctc 405
                 |||||||||| || || |||||||| ||||||||
Sbjct: 29928955 aagtccttgggatcaggaaggttgaagccgctctc 29928989



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                                
Query: 119      aaaaatggacgtccctcaaaaccatcacattt 150
                ||||||||||||||||| ||||||||||||||
Sbjct: 29928703 aaaaatggacgtccctcgaaaccatcacattt 29928734



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 236      tccggctcctccgcctcctgcttggccg 263
                ||||||||||||||||||| ||| ||||
Sbjct: 15914667 tccggctcctccgcctcctccttcgccg 15914694
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>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0541C02
          Length = 150660

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                        
Query: 311  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 370
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 5043 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 5102

                                               
Query: 371  gagtccttggggtccggcaggttgaacccgctctc 405
             |||||||||| || || |||||||| ||||||||
Sbjct: 5103 aagtccttgggatcaggaaggttgaagccgctctc 5137



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 119  aaaaatggacgtccctcaaaaccatcacattt 150
            ||||||||||||||||| ||||||||||||||
Sbjct: 4851 aaaaatggacgtccctcgaaaccatcacattt 4882
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>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0481E08
          Length = 171965

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                          
Query: 311    acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 370
              ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 124408 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 124467

                                                 
Query: 371    gagtccttggggtccggcaggttgaacccgctctc 405
               |||||||||| || || |||||||| ||||||||
Sbjct: 124468 aagtccttgggatcaggaaggttgaagccgctctc 124502



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                              
Query: 119    aaaaatggacgtccctcaaaaccatcacattt 150
              ||||||||||||||||| ||||||||||||||
Sbjct: 124216 aaaaatggacgtccctcgaaaccatcacattt 124247
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>dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F01, full
            insert sequence
          Length = 1944

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                        
Query: 311  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 370
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 1656 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 1597

                                               
Query: 371  gagtccttggggtccggcaggttgaacccgctctc 405
             |||||||||| || || |||||||| ||||||||
Sbjct: 1596 aagtccttgggatcaggaaggttgaagccgctctc 1562



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 119  aaaaatggacgtccctcaaaaccatcacattt 150
            ||||||||||||||||| ||||||||||||||
Sbjct: 1848 aaaaatggacgtccctcgaaaccatcacattt 1817
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>dbj|AK102478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094I10, full
            insert sequence
          Length = 2708

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                        
Query: 311  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 370
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 2416 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 2357

                                               
Query: 371  gagtccttggggtccggcaggttgaacccgctctc 405
             |||||||||| || || |||||||| ||||||||
Sbjct: 2356 aagtccttgggatcaggaaggttgaagccgctctc 2322



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 119  aaaaatggacgtccctcaaaaccatcacattt 150
            ||||||||||||||||| ||||||||||||||
Sbjct: 2608 aaaaatggacgtccctcgaaaccatcacattt 2577
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>gb|BT024056.1| Zea mays clone EL01N0440A11 mRNA sequence
          Length = 2511

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                        
Query: 311  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 370
            ||||| |||||||||||||||||||||||||| |||||||||  ||||||||| ||||| 
Sbjct: 2172 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 2113

                                               
Query: 371  gagtccttggggtccggcaggttgaacccgctctc 405
             | ||||||||||| || ||| |||||||||||||
Sbjct: 2112 aactccttggggtcggggagggtgaacccgctctc 2078
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>dbj|AK062023.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-G02, full
            insert sequence
          Length = 2026

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                        
Query: 311  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 370
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 1738 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 1679

                                               
Query: 371  gagtccttggggtccggcaggttgaacccgctctc 405
             |||||||||| || || |||||||| ||||||||
Sbjct: 1678 aagtccttgggatcaggaaggttgaagccgctctc 1644



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 119  aaaaatggacgtccctcaaaaccatcacattt 150
            ||||||||||||||||| ||||||||||||||
Sbjct: 1930 aaaaatggacgtccctcgaaaccatcacattt 1899
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>dbj|AB037681.1| Oryza sativa HSP90 mRNA for heat shock protein 90, complete cds
          Length = 2731

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 83/95 (87%)
 Strand = Plus / Minus

                                                                        
Query: 311  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 370
            ||||| ||||||||||||||||| ||||||||||||||||||| |||||||||  | || 
Sbjct: 2410 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctgaaggcg 2351

                                               
Query: 371  gagtccttggggtccggcaggttgaacccgctctc 405
             |||||||||| || || |||||||| ||||||||
Sbjct: 2350 aagtccttgggatcagggaggttgaagccgctctc 2316



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 119  aaaaatggacgtccctcaaaaccatcacattt 150
            ||||||||||||||||| ||||||||||||||
Sbjct: 2602 aaaaatggacgtccctcgaaaccatcacattt 2571
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>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence
          Length = 199737

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 226    ctgctcgtgttccggctcctccgcctcctgct 257
              |||||| ||||||||||||||| |||||||||
Sbjct: 178788 ctgctcctgttccggctcctcctcctcctgct 178819
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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 161     atttctttctaatgaaatgaaa 182
               ||||||||||||||||||||||
Sbjct: 1261169 atttctttctaatgaaatgaaa 1261148
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 241     ctcctccgcctcctgcttggcc 262
               ||||||||||||||||||||||
Sbjct: 2035901 ctcctccgcctcctgcttggcc 2035922
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>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome
          Length = 1522076

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 169     ctaatgaaatgaaagctaaat 189
               |||||||||||||||||||||
Sbjct: 1421262 ctaatgaaatgaaagctaaat 1421242
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>emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 2/11
          Length = 346357

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 372    agtccttggggtccggcaggt 392
              |||||||||||||||||||||
Sbjct: 266763 agtccttggggtccggcaggt 266743
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>gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 222553

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 167    ttctaatgaaatgaaagctaa 187
              |||||||||||||||||||||
Sbjct: 112594 ttctaatgaaatgaaagctaa 112614
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>ref|NR_002839.1| Mus musculus distal-less homeobox 6, antisense (Dlx6as) on chromosome
            6
          Length = 1351

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 239  ggctcctccgcctcctgcttg 259
            |||||||||||||||||||||
Sbjct: 1084 ggctcctccgcctcctgcttg 1064
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>ref|XM_318677.2| Anopheles gambiae str. PEST ENSANGP00000004639 (ENSANGG00000003636),
            partial mRNA
          Length = 3264

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 243  cctccgcctcctgcttggccg 263
            |||||||||||||||||||||
Sbjct: 1432 cctccgcctcctgcttggccg 1412
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>gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, complete sequence
          Length = 183177

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 138    aaccatcacatttccagtcca 158
              |||||||||||||||||||||
Sbjct: 132650 aaccatcacatttccagtcca 132630
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>gb|AF022079.1|AF022079 Mus musculus antisense Dlx-6 mRNA, partial sequence
          Length = 1351

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 239  ggctcctccgcctcctgcttg 259
            |||||||||||||||||||||
Sbjct: 1084 ggctcctccgcctcctgcttg 1064
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>gb|AC122240.4| Mus musculus BAC clone RP23-145L9 from 6, complete sequence
          Length = 211740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 239    ggctcctccgcctcctgcttg 259
              |||||||||||||||||||||
Sbjct: 107299 ggctcctccgcctcctgcttg 107319
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>gb|AC146297.3| Mus musculus BAC clone RP23-260F15 from chromosome 9, complete sequence
          Length = 176549

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    aactaggtacagtagtacat 63
             ||||||||||||||||||||
Sbjct: 13547 aactaggtacagtagtacat 13528
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>gb|AC125049.3| Mus musculus BAC clone RP23-367C15 from chromosome 9, complete sequence
          Length = 211511

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    tcattaaacaagaaactagg 50
             ||||||||||||||||||||
Sbjct: 83603 tcattaaacaagaaactagg 83584
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>gb|AC115355.3| Mus musculus BAC clone RP23-14J16 from 9, complete sequence
          Length = 179362

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     aactaggtacagtagtacat 63
              ||||||||||||||||||||
Sbjct: 148078 aactaggtacagtagtacat 148059
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>gb|AC007656.2| Homo sapiens 12q22 BAC RPCI11-534P6 (Rowswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 171236

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   aatgaaatgaaagctaaatg 190
             ||||||||||||||||||||
Sbjct: 60679 aatgaaatgaaagctaaatg 60698
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>gb|AC104820.4| Homo sapiens BAC clone RP11-739A13 from 2, complete sequence
          Length = 161786

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 169   ctaatgaaatgaaagctaaatggg 192
             ||||||||| ||||||||||||||
Sbjct: 22238 ctaatgaaaagaaagctaaatggg 22261
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>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0031P18
          Length = 156535

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 236   tccggctcctccgcctcctgcttggccg 263
             ||||||||||||||||||| ||| ||||
Sbjct: 48116 tccggctcctccgcctcctccttcgccg 48143
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>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0026P23
          Length = 180188

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 236    tccggctcctccgcctcctgcttggccg 263
              ||||||||||||||||||| ||| ||||
Sbjct: 127670 tccggctcctccgcctcctccttcgccg 127697
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>gb|AC002460.1|AC002460 Human BAC clone CTB-191D16, complete sequence
          Length = 174952

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   ctaatgaaatgaaagctaaa 188
             ||||||||||||||||||||
Sbjct: 56061 ctaatgaaatgaaagctaaa 56080
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>emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 in linkage group 4,
             complete sequence
          Length = 99176

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   catttccagtccaacatttc 165
             ||||||||||||||||||||
Sbjct: 21017 catttccagtccaacatttc 21036
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>dbj|AP000785.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-619A14, complete
             sequence
          Length = 126000

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   ggggctcaggtccaggctct 341
             ||||||||||||||||||||
Sbjct: 18841 ggggctcaggtccaggctct 18822
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 241     ctcctccgcctcctgcttgg 260
               ||||||||||||||||||||
Sbjct: 1682827 ctcctccgcctcctgcttgg 1682846
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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 352     ccggtagatgctcgacgcagagtc 375
               ||||||||||||| ||||||||||
Sbjct: 1195828 ccggtagatgctcaacgcagagtc 1195851
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>emb|AL807382.8| Mouse DNA sequence from clone RP23-434B7 on chromosome 4, complete
             sequence
          Length = 190179

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    aactaggtacagtagtacat 63
             ||||||||||||||||||||
Sbjct: 70193 aactaggtacagtagtacat 70212


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,836,455
Number of Sequences: 3902068
Number of extensions: 2836455
Number of successful extensions: 69681
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69484
Number of HSP's gapped (non-prelim): 197
length of query: 405
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 383
effective length of database: 17,147,199,772
effective search space: 6567377512676
effective search space used: 6567377512676
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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