Clone Name | rbastl30c07 |
---|---|
Clone Library Name | barley_pub |
>PLD1_CRIGR (O08684) Phospholipase D1 (EC 3.1.4.4) (PLD 1) (Choline phosphatase| 1) (Phosphatidylcholine-hydrolyzing phospholipase D1) Length = 1036 Score = 34.3 bits (77), Expect = 0.12 Identities = 15/54 (27%), Positives = 28/54 (51%) Frame = -1 Query: 424 VDLDRSPSPQEQDDKSAPYSPVYNGEGGRGSMSPNVEPVVDAKPVEVSVSSTKR 263 V+ D SP + +K P+S +YN +G + PN++ + P++ V +R Sbjct: 40 VEFDTSPGDPKAQEKYIPFSSIYNTQGFK---EPNIQTYLSGCPIKAQVLEVER 90
>PLD1_HUMAN (Q13393) Phospholipase D1 (EC 3.1.4.4) (PLD 1) (Choline phosphatase| 1) (Phosphatidylcholine-hydrolyzing phospholipase D1) (hPLD1) Length = 1074 Score = 32.7 bits (73), Expect = 0.36 Identities = 16/54 (29%), Positives = 28/54 (51%) Frame = -1 Query: 424 VDLDRSPSPQEQDDKSAPYSPVYNGEGGRGSMSPNVEPVVDAKPVEVSVSSTKR 263 VD D SPS + + P+S +YN +G + PN++ + P++ V +R Sbjct: 40 VDYDVSPSDPKIQEVYIPFSAIYNTQGFK---EPNIQTYLSGCPIKAQVLEVER 90
>PLD1_MOUSE (Q9Z280) Phospholipase D1 (EC 3.1.4.4) (PLD 1) (Choline phosphatase| 1) (Phosphatidylcholine-hydrolyzing phospholipase D1) (mPLD1) Length = 1074 Score = 31.6 bits (70), Expect = 0.79 Identities = 14/54 (25%), Positives = 27/54 (50%) Frame = -1 Query: 424 VDLDRSPSPQEQDDKSAPYSPVYNGEGGRGSMSPNVEPVVDAKPVEVSVSSTKR 263 V+ D SP + + P+S +YN +G + PN++ + P++ V +R Sbjct: 40 VEYDASPGDPKAQEGCIPFSSIYNTQGFK---EPNIQTYLSGCPIKAQVLEVER 90
>PLD1_RAT (P70496) Phospholipase D1 (EC 3.1.4.4) (PLD 1) (Choline phosphatase| 1) (Phosphatidylcholine-hydrolyzing phospholipase D1) (rPLD1) Length = 1074 Score = 30.8 bits (68), Expect = 1.4 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = -1 Query: 424 VDLDRSPSPQEQDDKSAPYSPVYNGEGGRGSMSPNVEPVVDAKPVEVSVSSTKR 263 V+ D SP + P+S +YN +G + PN++ + PV+ V +R Sbjct: 40 VEYDASPGDPTAQEACIPFSSIYNTQGFK---EPNIQIYLSGCPVKAQVLEVER 90
>SP5G_SYMTH (Q67JC7) Putative septation protein spoVG| Length = 140 Score = 28.5 bits (62), Expect = 6.7 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -1 Query: 406 PSPQEQDDKSAPYSPVYNGEGGR 338 P+PQ QD+ P+ P +GEG R Sbjct: 106 PAPQLQDESELPWEPGDDGEGAR 128
>FOLR1_HUMAN (P15328) Folate receptor alpha precursor (FR-alpha) (Folate| receptor 1) (Folate receptor, adult) (Adult folate-binding protein) (FBP) (Ovarian tumor-associated antigen MOv18) (KB cells FBP) Length = 257 Score = 28.1 bits (61), Expect = 8.8 Identities = 12/35 (34%), Positives = 14/35 (40%) Frame = +1 Query: 319 H*GSLTPCLLRHYTQDYMEQTCHPAPADWATDPDQ 423 H G + P RH+ QD C P W DQ Sbjct: 88 HCGEMAPACKRHFIQDTCLYECSPNLGPWIQQVDQ 122 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,880,502 Number of Sequences: 219361 Number of extensions: 914333 Number of successful extensions: 2232 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2199 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2232 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)