ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl30c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105953.1| Zea mays PCO124678 mRNA sequence 70 6e-09
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
3dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
4dbj|AK122104.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
5dbj|AK102720.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
6dbj|AK066294.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
7dbj|AK062222.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
8gb|AC116529.16| Mus musculus chromosome 8, clone RP24-380O18, co... 46 0.092
9gb|AC114589.30| Mus musculus chromosome 8, clone RP23-365O13, co... 46 0.092
10emb|AL138731.10| Human DNA sequence from clone RP1-23E21 on chro... 44 0.36
11gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility l... 42 1.4
12gb|AC132474.3| Mus musculus BAC clone RP23-114G13 from chromosom... 42 1.4
13gb|AC122726.21| Medicago truncatula clone mth2-23o24, complete s... 42 1.4
14emb|BX276092.9| Human DNA sequence from clone RP11-402P6 on chro... 42 1.4
15gb|AC068394.14| Homo sapiens chromosome 8, clone RP11-340H8, com... 42 1.4
16gb|AC087664.5| Homo sapiens chromosome 8, clone RP11-379I19, com... 42 1.4
17gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 1.4
18dbj|AK041557.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 42 1.4
19gb|AC126673.3| Mus musculus BAC clone RP24-491A6 from chromosome... 42 1.4
20emb|AL590763.2|HSXDPB Homo sapiens chromosome X sequence from 6... 42 1.4
21emb|AJ341503.1|HSA341503 Homo sapiens genomic sequence surroundi... 42 1.4
22emb|AJ341491.1|HSA341491 Homo sapiens genomic sequence surroundi... 42 1.4
23emb|AJ342137.1|HSA342137 Homo sapiens genomic sequence surroundi... 42 1.4
24ref|NM_209457.1| Eremothecium gossypii ADR008Wp (ADR008W), mRNA 42 1.4
25emb|CT025759.14| Mouse DNA sequence from clone RP24-317H19 on ch... 42 1.4
26gb|AC170913.2| Mus musculus BAC clone RP23-197F6 from chromosome... 42 1.4
27gb|M64933.1|MUSSLPSEXB Mouse nonfunctional sex-limited protein, ... 42 1.4
28dbj|AB047949.1| Macaca fascicularis brain cDNA, clone:QnpA-12094 42 1.4
29emb|AL591763.14| Mouse DNA sequence from clone RP23-480D17 on ch... 42 1.4
30gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 5.7
31gb|AC123998.7| Mus musculus chromosome 5, clone RP24-421H18, com... 40 5.7
32gb|AC186170.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 5.7
33gb|AC117234.4| Mus musculus BAC clone RP23-410J2 from chromosome... 40 5.7
34gb|AC098738.2| Mus musculus BAC clone RP23-122F7 from 8, complet... 40 5.7
35gb|AC122048.2| Mus musculus BAC clone RP24-456G2 from 2, complet... 40 5.7
36gb|AC163330.4| Mus musculus chromosome 5, clone RP23-167H23, com... 40 5.7
37emb|AL513215.7| Human DNA sequence from clone RP11-530P14 on chr... 40 5.7
38emb|AL160281.17| Human DNA sequence from clone RP11-21M7 on chro... 40 5.7
39gb|AC092695.8| Homo sapiens 3 BAC RP11-81E19 (Roswell Park Cance... 40 5.7
40emb|CR384105.16| Zebrafish DNA sequence from clone CH211-186K13 ... 40 5.7
41gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome 40 5.7
42emb|BX530719.4| Zebrafish DNA sequence from clone DKEYP-51D11 in... 40 5.7
43emb|X81842.1|SAPYPSUL S.acidoladarius PYPSUL gene 40 5.7
44emb|AJ325292.1|HSA325292 Homo sapiens genomic sequence surroundi... 40 5.7
45gb|AC004857.1|AC004857 Homo sapiens PAC clone RP4-685A2 from 7p2... 40 5.7
46gb|AC155075.10| Mus musculus chromosome 5, clone RP24-82B9, comp... 40 5.7
47gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 5.7
48emb|AL845373.12| Mouse DNA sequence from clone RP23-211L7 on chr... 40 5.7 
>gb|AY105953.1| Zea mays PCO124678 mRNA sequence
          Length = 1781

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                   
Query: 350  gccattatacacaggactatatggagcagacttgtcatc 388
            |||||| ||||||||||||||||||||||||||||||||
Sbjct: 1252 gccattgtacacaggactatatggagcagacttgtcatc 1214
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 224      ctctccctcttcatctatcataccttcctcttgatcctccct 265
                |||||| |||||||||||||||||||||||||  ||||||||
Sbjct: 20523934 ctctccatcttcatctatcataccttcctcttcgtcctccct 20523893
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>dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1156H12
          Length = 159509

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                       
Query: 224   ctctccctcttcatctatcataccttcctcttgatcctccct 265
             |||||| |||||||||||||||||||||||||  ||||||||
Sbjct: 47756 ctctccatcttcatctatcataccttcctcttcgtcctccct 47715
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>dbj|AK122104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125P18, full
            insert sequence
          Length = 2776

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 224  ctctccctcttcatctatcataccttcctcttgatcctccct 265
            |||||| |||||||||||||||||||||||||  ||||||||
Sbjct: 2437 ctctccatcttcatctatcataccttcctcttcgtcctccct 2396
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>dbj|AK102720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105G04, full
            insert sequence
          Length = 2745

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 224  ctctccctcttcatctatcataccttcctcttgatcctccct 265
            |||||| |||||||||||||||||||||||||  ||||||||
Sbjct: 2439 ctctccatcttcatctatcataccttcctcttcgtcctccct 2398
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>dbj|AK066294.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059F16, full
            insert sequence
          Length = 2208

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 224  ctctccctcttcatctatcataccttcctcttgatcctccct 265
            |||||| |||||||||||||||||||||||||  ||||||||
Sbjct: 1869 ctctccatcttcatctatcataccttcctcttcgtcctccct 1828
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>dbj|AK062222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-B09, full
           insert sequence
          Length = 1245

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 224 ctctccctcttcatctatcataccttcctcttgatcctccct 265
           |||||| |||||||||||||||||||||||||  ||||||||
Sbjct: 906 ctctccatcttcatctatcataccttcctcttcgtcctccct 865
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>gb|AC116529.16| Mus musculus chromosome 8, clone RP24-380O18, complete sequence
          Length = 166863

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 217   taccctcctctccctcttcatct 239
             |||||||||||||||||||||||
Sbjct: 43817 taccctcctctccctcttcatct 43839
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>gb|AC114589.30| Mus musculus chromosome 8, clone RP23-365O13, complete sequence
          Length = 213866

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 217  taccctcctctccctcttcatct 239
            |||||||||||||||||||||||
Sbjct: 3867 taccctcctctccctcttcatct 3845
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>emb|AL138731.10| Human DNA sequence from clone RP1-23E21 on chromosome 6 Contains a
             novel gene and a 26S proteasome-associated PAD1 homolog
             POH1 pseudogene, complete sequence
          Length = 72312

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 88    tgtttgtagaatagcatatgct 109
             ||||||||||||||||||||||
Sbjct: 21125 tgtttgtagaatagcatatgct 21104
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>gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility locus class III region:
             complement C4 (C4) and cytochrome P450 hydroxylase A
             (CYP21OH-A) genes, complete cds; slp pseudogene, complete
             sequence; NG6, SKI, and complement factor B (Bf) genes,
             complete cds; and complement factor C2 (C2) gene, partial
             cds
          Length = 149886

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 219   ccctcctctccctcttcatct 239
             |||||||||||||||||||||
Sbjct: 92813 ccctcctctccctcttcatct 92793
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>gb|AC132474.3| Mus musculus BAC clone RP23-114G13 from chromosome 9, complete sequence
          Length = 220976

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 220   cctcctctccctcttcatctatcatacct 248
             |||||||||||||||| |||||| |||||
Sbjct: 64593 cctcctctccctcttcttctatcctacct 64565
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>gb|AC122726.21| Medicago truncatula clone mth2-23o24, complete sequence
          Length = 130999

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 23    gcaaatgaaagttcaatgttacata 47
             ||||||||||||||||| |||||||
Sbjct: 48645 gcaaatgaaagttcaatattacata 48669
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>emb|BX276092.9| Human DNA sequence from clone RP11-402P6 on chromosome X Contains five
             novel genes, five NADH dehydrogenase (ubiquinone) 1 alpha
             subcomplex, 4, 9kDa (NDUFA4) pseudogenes and two CpG
             islands, complete sequence
          Length = 201575

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 218   accctcctctccctcttcatc 238
             |||||||||||||||||||||
Sbjct: 14131 accctcctctccctcttcatc 14111
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>gb|AC068394.14| Homo sapiens chromosome 8, clone RP11-340H8, complete sequence
          Length = 177005

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 41     ttacataaaaacaacagcaca 61
              |||||||||||||||||||||
Sbjct: 147818 ttacataaaaacaacagcaca 147838
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>gb|AC087664.5| Homo sapiens chromosome 8, clone RP11-379I19, complete sequence
          Length = 199456

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 41     ttacataaaaacaacagcaca 61
              |||||||||||||||||||||
Sbjct: 182169 ttacataaaaacaacagcaca 182149
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>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV,
              complete sequence
          Length = 1466886

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 249    tcctcttgatcctccctcttc 269
              |||||||||||||||||||||
Sbjct: 717459 tcctcttgatcctccctcttc 717439
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>dbj|AK041557.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630020M12 product:unclassifiable, full
            insert sequence
          Length = 4690

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 219  ccctcctctccctcttcatct 239
            |||||||||||||||||||||
Sbjct: 1545 ccctcctctccctcttcatct 1565
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>gb|AC126673.3| Mus musculus BAC clone RP24-491A6 from chromosome 13, complete sequence
          Length = 123585

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 351   ccattatacacaggactatat 371
             |||||||||||||||||||||
Sbjct: 38998 ccattatacacaggactatat 38978
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>emb|AL590763.2|HSXDPB Homo sapiens chromosome X  sequence from 6 PACs 1 BAC and 1 cosmid,
              region GJB1-DXS559 map Xq13.1, complete sequence
          Length = 248968

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 218    accctcctctccctcttcatc 238
              |||||||||||||||||||||
Sbjct: 207100 accctcctctccctcttcatc 207080
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>emb|AJ341503.1|HSA341503 Homo sapiens genomic sequence surrounding NotI site, clone
           NR3-BE1RS
          Length = 695

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 218 accctcctctccctcttcatc 238
           |||||||||||||||||||||
Sbjct: 163 accctcctctccctcttcatc 183
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>emb|AJ341491.1|HSA341491 Homo sapiens genomic sequence surrounding NotI site, clone
           NR3-BE4RS
          Length = 694

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 218 accctcctctccctcttcatc 238
           |||||||||||||||||||||
Sbjct: 163 accctcctctccctcttcatc 183
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>emb|AJ342137.1|HSA342137 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ-4AJ2RS
          Length = 717

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 218 accctcctctccctcttcatc 238
           |||||||||||||||||||||
Sbjct: 163 accctcctctccctcttcatc 183
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>ref|NM_209457.1| Eremothecium gossypii ADR008Wp (ADR008W), mRNA
          Length = 1545

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 249 tcctcttgatcctccctcttc 269
           |||||||||||||||||||||
Sbjct: 224 tcctcttgatcctccctcttc 204
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>emb|CT025759.14| Mouse DNA sequence from clone RP24-317H19 on chromosome 17, complete
             sequence
          Length = 171682

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 219   ccctcctctccctcttcatct 239
             |||||||||||||||||||||
Sbjct: 46341 ccctcctctccctcttcatct 46321
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>gb|AC170913.2| Mus musculus BAC clone RP23-197F6 from chromosome 13, complete sequence
          Length = 199317

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 351    ccattatacacaggactatat 371
              |||||||||||||||||||||
Sbjct: 142654 ccattatacacaggactatat 142634
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>gb|M64933.1|MUSSLPSEXB Mouse nonfunctional sex-limited protein, and cytochrome P-450 (Cyp21)
            genes, complete cds
          Length = 26307

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 219  ccctcctctccctcttcatct 239
            |||||||||||||||||||||
Sbjct: 9088 ccctcctctccctcttcatct 9108
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>dbj|AB047949.1| Macaca fascicularis brain cDNA, clone:QnpA-12094
          Length = 1794

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 97   aatagcatatgctgctgcttacagg 121
            ||||||||||| |||||||||||||
Sbjct: 1038 aatagcatatgatgctgcttacagg 1014
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>emb|AL591763.14| Mouse DNA sequence from clone RP23-480D17 on chromosome 2, complete
             sequence
          Length = 153847

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 219   ccctcctctccctcttcatct 239
             |||||||||||||||||||||
Sbjct: 21150 ccctcctctccctcttcatct 21130
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 213     atcataccctcctctccctc 232
               ||||||||||||||||||||
Sbjct: 2297105 atcataccctcctctccctc 2297086
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>gb|AC123998.7| Mus musculus chromosome 5, clone RP24-421H18, complete sequence
          Length = 151344

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   ccctcctctccctcttcatc 238
             ||||||||||||||||||||
Sbjct: 72140 ccctcctctccctcttcatc 72121
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>gb|AC186170.1| Ornithorhynchus anatinus chromosome UNK clone OABb-12B13, complete
             sequence
          Length = 134720

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   ccctcctctccctcttcatc 238
             ||||||||||||||||||||
Sbjct: 14916 ccctcctctccctcttcatc 14897
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>gb|AC117234.4| Mus musculus BAC clone RP23-410J2 from chromosome 6, complete sequence
          Length = 193027

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    ataccctcctctccctcttc 235
              ||||||||||||||||||||
Sbjct: 111781 ataccctcctctccctcttc 111762
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>gb|AC098738.2| Mus musculus BAC clone RP23-122F7 from 8, complete sequence
          Length = 216974

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 220    cctcctctccctcttcatct 239
              ||||||||||||||||||||
Sbjct: 139314 cctcctctccctcttcatct 139295
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>gb|AC122048.2| Mus musculus BAC clone RP24-456G2 from 2, complete sequence
          Length = 153772

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    tcataacaaacagcaaatga 30
             ||||||||||||||||||||
Sbjct: 55636 tcataacaaacagcaaatga 55617
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>gb|AC163330.4| Mus musculus chromosome 5, clone RP23-167H23, complete sequence
          Length = 207781

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   ccctcctctccctcttcatc 238
             ||||||||||||||||||||
Sbjct: 32651 ccctcctctccctcttcatc 32670
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>emb|AL513215.7| Human DNA sequence from clone RP11-530P14 on chromosome 6, complete
            sequence
          Length = 43320

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 352  cattatacacaggactatat 371
            ||||||||||||||||||||
Sbjct: 5592 cattatacacaggactatat 5611
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>emb|AL160281.17| Human DNA sequence from clone RP11-21M7 on chromosome 1 Contains a
             novel gene, the 5' end of the RASAL2 gene for RAS protein
             activator like 2 and a CpG island, complete sequence
          Length = 180954

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    ttcaatgttacataaaaaca 53
             ||||||||||||||||||||
Sbjct: 80057 ttcaatgttacataaaaaca 80038
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>gb|AC092695.8| Homo sapiens 3 BAC RP11-81E19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166471

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    tgtttgtagaatagcatatg 107
             ||||||||||||||||||||
Sbjct: 49328 tgtttgtagaatagcatatg 49309
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>emb|CR384105.16| Zebrafish DNA sequence from clone CH211-186K13 in linkage group 14,
             complete sequence
          Length = 144285

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    gttacataaaaacaacagca 59
             ||||||||||||||||||||
Sbjct: 63670 gttacataaaaacaacagca 63651
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>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome
          Length = 2225959

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 222    tcctctccctcttcatctatcata 245
              |||||||||||||||||| |||||
Sbjct: 764068 tcctctccctcttcatctttcata 764045
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>emb|BX530719.4| Zebrafish DNA sequence from clone DKEYP-51D11 in linkage group 14,
             complete sequence
          Length = 197865

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    gttacataaaaacaacagca 59
             ||||||||||||||||||||
Sbjct: 53489 gttacataaaaacaacagca 53470
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>emb|X81842.1|SAPYPSUL S.acidoladarius PYPSUL gene
          Length = 547

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 222 tcctctccctcttcatctatcata 245
           |||||||||||||||||| |||||
Sbjct: 316 tcctctccctcttcatctttcata 293
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>emb|AJ325292.1|HSA325292 Homo sapiens genomic sequence surrounding NotI site, clone NR1-IH5R
          Length = 795

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 accctcctctccctcttcat 237
           ||||||||||||||||||||
Sbjct: 163 accctcctctccctcttcat 182
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>gb|AC004857.1|AC004857 Homo sapiens PAC clone RP4-685A2 from 7p21-p22, complete sequence
          Length = 109359

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   ctcttcatctatcatacctt 249
             ||||||||||||||||||||
Sbjct: 24895 ctcttcatctatcatacctt 24876
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>gb|AC155075.10| Mus musculus chromosome 5, clone RP24-82B9, complete sequence
          Length = 236335

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    ctctccctcttcatctatca 243
              ||||||||||||||||||||
Sbjct: 159490 ctctccctcttcatctatca 159509
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>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aacagcaaatgaaagttcaa 38
              ||||||||||||||||||||
Sbjct: 822283 aacagcaaatgaaagttcaa 822302
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>emb|AL845373.12| Mouse DNA sequence from clone RP23-211L7 on chromosome 2, complete
              sequence
          Length = 228651

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     tcataacaaacagcaaatga 30
              ||||||||||||||||||||
Sbjct: 206818 tcataacaaacagcaaatga 206799


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,968,340
Number of Sequences: 3902068
Number of extensions: 3968340
Number of successful extensions: 95019
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94838
Number of HSP's gapped (non-prelim): 181
length of query: 424
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 402
effective length of database: 17,147,199,772
effective search space: 6893174308344
effective search space used: 6893174308344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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