ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl30c06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB164396.1| Hordeum vulgare HvMS mRNA for methionine synthase, complete cds Length = 2558 Score = 858 bits (433), Expect = 0.0 Identities = 450/458 (98%) Strand = Plus / Minus Query: 18 tttgaaaccgtaacgtaacacaaactcagacacagatgaacaattcgccactcaagttta 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2557 tttgaaaccgtaacgtaacacaaactcagacacagatgaacaattcgccactcaagttta 2498 Query: 78 caatacacaccgacaaccgcctcaaaaagccaccgaatcaagggatgagcacatcctgcc 137 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2497 caatacacactgacaaccgcctcaaaaagccaccgaatcaagggatgagcacatcctgcc 2438 Query: 138 gagaaacaactaccctaataaccaacaagtggacacgaggtccagattattcaaagtaaa 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2437 gagaaacaactaccctaataaccaacaagtggacacgaggtccagattattcaaagtaaa 2378 Query: 198 acgccggccatggcaacggtgacatcctccttgcaattaaaannnnnnnagagctgctat 257 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2377 acgccggccatggcaacggtgacatcctccttgcaattaaaagggggggagagctgctat 2318 Query: 258 acgagcactgcttactgcgccttggcgagctcggcgcggatctgcttggcggcctcgacc 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2317 acgagcactgcttactgcgccttggcgagctcggcgcggatctgcttggcggcctcgacc 2258 Query: 318 atgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcgggg 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2257 atgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcgggg 2198 Query: 378 ttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggcaatc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2197 ttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggcaatc 2138 Query: 438 tcctccttggacgggatcctgggggagtggatgtcgta 475 |||||||||||||||||||||||||||||||||||||| Sbjct: 2137 tcctccttggacgggatcctgggggagtggatgtcgta 2100
>emb|AM039904.1| Hordeum vulgare mRNA for methionine synthase 1 enzyme (ms1 gene) Length = 2642 Score = 846 bits (427), Expect = 0.0 Identities = 447/456 (98%) Strand = Plus / Minus Query: 20 tgaaaccgtaacgtaacacaaactcagacacagatgaacaattcgccactcaagtttaca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2600 tgaaaccgtaacgtaacacaaactcagacacagatgaacaattcgccactcaagtttaca 2541 Query: 80 atacacaccgacaaccgcctcaaaaagccaccgaatcaagggatgagcacatcctgccga 139 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2540 atacacactgacaaccgcctcaaaaagccaccgaatcaagggatgagcacatcctgccga 2481 Query: 140 gaaacaactaccctaataaccaacaagtggacacgaggtccagattattcaaagtaaaac 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2480 gaaacaactaccctaataaccaacaagtggacacgaggtccagattattcaaagtaaaac 2421 Query: 200 gccggccatggcaacggtgacatcctccttgcaattaaaannnnnnnagagctgctatac 259 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2420 gccggccatggcaacggtgacatcctccttgcaattaaaagggggggagagctgctatac 2361 Query: 260 gagcactgcttactgcgccttggcgagctcggcgcggatctgcttggcggcctcgaccat 319 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2360 gagcactgcttactgcgccttggcgagctcggcgcggatttgcttggcggcctcgaccat 2301 Query: 320 gttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcggggtt 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2300 gttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcggggtt 2241 Query: 380 cacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggcaatctc 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2240 cacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggcaatctc 2181 Query: 440 ctccttggacgggatcctgggggagtggatgtcgta 475 |||||||||||||||||||||||||||||||||||| Sbjct: 2180 ctccttggacgggatcctgggggagtggatgtcgta 2145
>emb|AM039905.1| Hordeum vulgare mRNA for methionine synthase 2 enzyme (ms2 gene) Length = 2675 Score = 262 bits (132), Expect = 9e-67 Identities = 180/196 (91%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| ||||||| || |||||||||| || ||||||||||| | Sbjct: 2373 tggcgagctgggtgcggatgagcttggccgcagcgaccatgttagtcagggcgggcttca 2314 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 2313 cctcggtgtacttgcgggtcttgaggccgcagtcagggttcacccagaggatgttggtgt 2254 Query: 400 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 459 ||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 2253 cgagcaccgcgagcatcttgttgacgcggtcggcaatctcctccgtggaggggatcctgg 2194 Query: 460 gggagtggatgtcgta 475 |||||||||||||||| Sbjct: 2193 gggagtggatgtcgta 2178
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 242 bits (122), Expect = 9e-61 Identities = 176/194 (90%) Strand = Plus / Minus Query: 282 gcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttgacc 341 ||||||| || |||||| ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 26696168 gcgagctgggtgcggatgagcttggcggccaaaaccatgttggtgagggcaggcttcacc 26696109 Query: 342 tcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcg 401 |||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 26696108 tcggtgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgtcg 26696049 Query: 402 agcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggg 461 ||||| || ||||||||||||| |||||| |||||||||||| ||||||||||||||||| Sbjct: 26696048 agcaccgcaagcatcttgttgatgcggtccgcaatctcctccgtggacgggatcctgggg 26695989 Query: 462 gagtggatgtcgta 475 |||||||||||||| Sbjct: 26695988 gagtggatgtcgta 26695975 Score = 240 bits (121), Expect = 3e-60 Identities = 175/193 (90%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct: 26684320 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 26684261 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 26684260 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 26684201 Query: 400 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 459 ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| | Sbjct: 26684200 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcctctgtggacgggatccttg 26684141 Query: 460 gggagtggatgtc 472 ||||||||||||| Sbjct: 26684140 gggagtggatgtc 26684128
>dbj|AK067726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O11, full insert sequence Length = 2783 Score = 242 bits (122), Expect = 9e-61 Identities = 176/194 (90%) Strand = Plus / Minus Query: 282 gcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttgacc 341 ||||||| || |||||| ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 2474 gcgagctgggtgcggatgagcttggcggccaaaaccatgttggtgagggcaggcttcacc 2415 Query: 342 tcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcg 401 |||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 2414 tcggtgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgtcg 2355 Query: 402 agcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggg 461 ||||| || ||||||||||||| |||||| |||||||||||| ||||||||||||||||| Sbjct: 2354 agcaccgcaagcatcttgttgatgcggtccgcaatctcctccgtggacgggatcctgggg 2295 Query: 462 gagtggatgtcgta 475 |||||||||||||| Sbjct: 2294 gagtggatgtcgta 2281
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 242 bits (122), Expect = 9e-61 Identities = 176/194 (90%) Strand = Plus / Minus Query: 282 gcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttgacc 341 ||||||| || |||||| ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 26624337 gcgagctgggtgcggatgagcttggcggccaaaaccatgttggtgagggcaggcttcacc 26624278 Query: 342 tcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcg 401 |||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 26624277 tcggtgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgtcg 26624218 Query: 402 agcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggg 461 ||||| || ||||||||||||| |||||| |||||||||||| ||||||||||||||||| Sbjct: 26624217 agcaccgcaagcatcttgttgatgcggtccgcaatctcctccgtggacgggatcctgggg 26624158 Query: 462 gagtggatgtcgta 475 |||||||||||||| Sbjct: 26624157 gagtggatgtcgta 26624144 Score = 240 bits (121), Expect = 3e-60 Identities = 175/193 (90%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct: 26612489 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 26612430 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 26612429 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 26612370 Query: 400 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 459 ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| | Sbjct: 26612369 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcctctgtggacgggatccttg 26612310 Query: 460 gggagtggatgtc 472 ||||||||||||| Sbjct: 26612309 gggagtggatgtc 26612297
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 242 bits (122), Expect = 9e-61 Identities = 176/194 (90%) Strand = Plus / Plus Query: 282 gcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttgacc 341 ||||||| || |||||| ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 74959 gcgagctgggtgcggatgagcttggcggccaaaaccatgttggtgagggcaggcttcacc 75018 Query: 342 tcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcg 401 |||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 75019 tcggtgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgtcg 75078 Query: 402 agcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggg 461 ||||| || ||||||||||||| |||||| |||||||||||| ||||||||||||||||| Sbjct: 75079 agcaccgcaagcatcttgttgatgcggtccgcaatctcctccgtggacgggatcctgggg 75138 Query: 462 gagtggatgtcgta 475 |||||||||||||| Sbjct: 75139 gagtggatgtcgta 75152
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 242 bits (122), Expect = 9e-61 Identities = 176/194 (90%) Strand = Plus / Plus Query: 282 gcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttgacc 341 ||||||| || |||||| ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 102810 gcgagctgggtgcggatgagcttggcggccaaaaccatgttggtgagggcaggcttcacc 102869 Query: 342 tcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcg 401 |||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 102870 tcggtgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgtcg 102929 Query: 402 agcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggg 461 ||||| || ||||||||||||| |||||| |||||||||||| ||||||||||||||||| Sbjct: 102930 agcaccgcaagcatcttgttgatgcggtccgcaatctcctccgtggacgggatcctgggg 102989 Query: 462 gagtggatgtcgta 475 |||||||||||||| Sbjct: 102990 gagtggatgtcgta 103003
>dbj|AK099069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163D13, full insert sequence Length = 2640 Score = 240 bits (121), Expect = 3e-60 Identities = 175/193 (90%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct: 2357 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 2298 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 2297 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 2238 Query: 400 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 459 ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| | Sbjct: 2237 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcctctgtggacgggatccttg 2178 Query: 460 gggagtggatgtc 472 ||||||||||||| Sbjct: 2177 gggagtggatgtc 2165
>dbj|AK067958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128E22, full insert sequence Length = 2058 Score = 240 bits (121), Expect = 3e-60 Identities = 175/193 (90%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct: 1724 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 1665 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 1664 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 1605 Query: 400 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 459 ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| | Sbjct: 1604 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcctctgtggacgggatccttg 1545 Query: 460 gggagtggatgtc 472 ||||||||||||| Sbjct: 1544 gggagtggatgtc 1532
>dbj|AK065255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J12, full insert sequence Length = 2668 Score = 240 bits (121), Expect = 3e-60 Identities = 175/193 (90%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct: 2356 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 2297 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 2296 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 2237 Query: 400 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 459 ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| | Sbjct: 2236 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcctctgtggacgggatccttg 2177 Query: 460 gggagtggatgtc 472 ||||||||||||| Sbjct: 2176 gggagtggatgtc 2164
>dbj|AK062198.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-G02, full insert sequence Length = 1064 Score = 240 bits (121), Expect = 3e-60 Identities = 175/193 (90%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct: 781 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 722 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 721 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 662 Query: 400 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 459 ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| | Sbjct: 661 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcctctatggacgggatccttg 602 Query: 460 gggagtggatgtc 472 ||||||||||||| Sbjct: 601 gggagtggatgtc 589
>emb|BX072547.2|CNS09S4Q Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0090N22 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 8623 Score = 240 bits (121), Expect = 3e-60 Identities = 175/193 (90%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct: 2904 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 2845 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 2844 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 2785 Query: 400 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 459 ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| | Sbjct: 2784 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcctctgtggacgggatccttg 2725 Query: 460 gggagtggatgtc 472 ||||||||||||| Sbjct: 2724 gggagtggatgtc 2712
>dbj|AK067757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116H17, full insert sequence Length = 2627 Score = 234 bits (118), Expect = 2e-58 Identities = 175/194 (90%) Strand = Plus / Minus Query: 282 gcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttgacc 341 ||||||| || |||||| ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 2355 gcgagctgggtgcggatgagcttggcggccaaaaccatgttggtgagggcaggcttcacc 2296 Query: 342 tcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcg 401 || | ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 2295 tctgtgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgtcg 2236 Query: 402 agcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggg 461 ||||| || ||||||||||||| |||||| |||||||||||| ||||||||||||||||| Sbjct: 2235 agcaccgcaagcatcttgttgatgcggtccgcaatctcctccgtggacgggatcctgggg 2176 Query: 462 gagtggatgtcgta 475 |||||||||||||| Sbjct: 2175 gagtggatgtcgta 2162
>gb|BT009353.1| Triticum aestivum clone wlm96.pk0018.c10:fis, full insert mRNA sequence Length = 2634 Score = 232 bits (117), Expect = 8e-58 Identities = 174/193 (90%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| ||||||| || | ||||||||||| ||||||||||| | Sbjct: 2364 tggcgagctgggtgcggatgagcttggccgcggcaaccatgttggtcagggcgggcttca 2305 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||| | |||||||||||||||||| |||||||| ||||||||||| ||||||||||||| Sbjct: 2304 cctccgtgtacttgcgggtcttgaggccgcagtcagggttcacccacaggatgttggtgt 2245 Query: 400 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 459 |||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 2244 cgaggaccgcgagcatcttgttgacgcggtcggcaatctcctccgtggaggggatcctgg 2185 Query: 460 gggagtggatgtc 472 ||||||||||||| Sbjct: 2184 gggagtggatgtc 2172
>gb|AF439723.1|AF439723 Zea mays methionine synthase mRNA, partial cds Length = 2300 Score = 210 bits (106), Expect = 3e-51 Identities = 148/162 (91%) Strand = Plus / Minus Query: 314 gaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 373 |||||||||||| ||||||||||||||||| | |||||||||||||||||| |||||||| Sbjct: 2256 gaccatgttggtcagggcgggcttgacctccgtgtacttgcgggtcttgaggccgcagtc 2197 Query: 374 ggggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggc 433 ||||||||||||||||||||||||||| ||||| || |||||||||| || ||||||||| Sbjct: 2196 ggggttcacccagaggatgttggtgtccagcaccgccagcatcttgtcgatgcggtcggc 2137 Query: 434 aatctcctccttggacgggatcctgggggagtggatgtcgta 475 |||||||| ||||||||||||||||||||||||||||| Sbjct: 2136 gatctcctcagccgacgggatcctgggggagtggatgtcgta 2095
>gb|AY111481.1| Zea mays CL598_4 mRNA sequence Length = 664 Score = 210 bits (106), Expect = 3e-51 Identities = 148/162 (91%) Strand = Plus / Plus Query: 314 gaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 373 |||||||||||| ||||| ||||| ||||| | ||||||||| ||||||||||||||||| Sbjct: 334 gaccatgttggtcagggcaggcttcacctccgtgtacttgcgtgtcttgagaccgcagtc 393 Query: 374 ggggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggc 433 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 394 agggttcacccagaggatgttggtgtcgagcacggcgagcatcttgttgacgcggtccgc 453 Query: 434 aatctcctccttggacgggatcctgggggagtggatgtcgta 475 |||||||| |||| ||||||||||| |||||||||||||| Sbjct: 454 gatctcctcggtggaggggatcctgggcgagtggatgtcgta 495
>gb|AY109415.1| Zea mays CL598_2 mRNA sequence Length = 3017 Score = 206 bits (104), Expect = 5e-50 Identities = 173/196 (88%) Strand = Plus / Plus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| |||| ||||| |||||||||||| ||||||||||||| Sbjct: 641 tggcgagctgggtgcggatgagcttagcggcggagaccatgttggtcagggcgggcttga 700 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 701 cctccgtgtacttgcgggtcttgaggccgcagtcggggttcacccagaggatgttggtgt 760 Query: 400 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 459 | ||||| || |||||||||| || ||||||||| |||||||| ||||||||||||| Sbjct: 761 ccagcaccgccagcatcttgtcgatgcggtcggcgatctcctcagccgacgggatcctgg 820 Query: 460 gggagtggatgtcgta 475 | |||||||||||||| Sbjct: 821 gcgagtggatgtcgta 836
>gb|BT016781.1| Zea mays clone Contig614 mRNA sequence Length = 1759 Score = 202 bits (102), Expect = 7e-49 Identities = 147/162 (90%) Strand = Plus / Minus Query: 314 gaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 373 |||||||||||| ||||| ||||| ||||| | ||||||||| ||||||||||||||||| Sbjct: 1359 gaccatgttggtcagggcaggcttcacctccgtgtacttgcgtgtcttgagaccgcagtc 1300 Query: 374 ggggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggc 433 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 1299 agggttcacccagaggatgttggtgtccagcacggcgagcatcttgttgacgcggtccgc 1240 Query: 434 aatctcctccttggacgggatcctgggggagtggatgtcgta 475 |||||||| |||| ||||||||||| |||||||||||||| Sbjct: 1239 gatctcctcggtggaggggatcctgggcgagtggatgtcgta 1198
>gb|AY104793.1| Zea mays PCO079166 mRNA sequence Length = 2720 Score = 190 bits (96), Expect = 3e-45 Identities = 171/196 (87%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 |||| |||| || |||||| |||||| |||| |||||||||||| ||||||||||||| Sbjct: 2399 tggcaagctgggtgcggatgagcttggtggccgagaccatgttggtcagggcgggcttga 2340 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||| | ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 2339 cctccgtgtacttgcgtgtcttgagaccacagtcagggttcacccagaggatgttggtgt 2280 Query: 400 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 459 ||||||| ||||||||||| | ||||||||| || |||||||| |||| || ||||| | Sbjct: 2279 cgagcacggcgagcatcttctcgacgcggtctgcgatctcctctgtggagggaatcctag 2220 Query: 460 gggagtggatgtcgta 475 | |||||||||||||| Sbjct: 2219 gagagtggatgtcgta 2204
>gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cytochrome P450-like protein, putative DNA-binding protein homolog, TATA-binding protein, hypothetical protein M3E9.200, 3-glucanase, K-exchanger-like protein, small heat shock-like protein, methionine synthase protein, putative far-red impaired response protein, and putative vegetative storage protein genes, complete cds Length = 100773 Score = 186 bits (94), Expect = 4e-44 Identities = 142/158 (89%) Strand = Plus / Plus Query: 315 accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcg 374 ||||||||||| ||||||||||||||||| | ||||||||| ||||||||||| ||||| Sbjct: 72721 accatgttggtcagggcgggcttgacctccgtgtacttgcgtgtcttgagaccacagtcc 72780 Query: 375 gggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggca 434 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 72781 gggttcacccagaggatgttggtgtcaagcacagcaagcatcttgttgacgcggtccgca 72840 Query: 435 atctcctccttggacgggatcctgggggagtggatgtc 472 |||||||| | | || |||||||| ||||||||||| Sbjct: 72841 atctcctcggtagtgggaatcctgggagagtggatgtc 72878
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 168 bits (85), Expect = 1e-38 Identities = 166/193 (86%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 |||| |||| || |||||| ||||||| || || ||||||||||| || || || || | Sbjct: 25306437 tggcaagctgggtgcggatgagcttggcagcatctaccatgttggttagtgcaggtttca 25306378 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| ||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||| Sbjct: 25306377 cctcggtgtatttgcgggtcttgagaccgcggtcagggttcacctagaggatgttggtgt 25306318 Query: 400 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 459 | ||||| || ||||||||||||| |||||| || |||||||| |||| |||||||||| Sbjct: 25306317 caagcacggcaagcatcttgttgatgcggtccgcgatctcctcggtggaggggatcctgg 25306258 Query: 460 gggagtggatgtc 472 ||||||||||||| Sbjct: 25306257 gggagtggatgtc 25306245
>gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete sequence Length = 152828 Score = 168 bits (85), Expect = 1e-38 Identities = 166/193 (86%) Strand = Plus / Plus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 |||| |||| || |||||| ||||||| || || ||||||||||| || || || || | Sbjct: 136923 tggcaagctgggtgcggatgagcttggcagcatctaccatgttggttagtgcaggtttca 136982 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| ||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||| Sbjct: 136983 cctcggtgtatttgcgggtcttgagaccgcggtcagggttcacctagaggatgttggtgt 137042 Query: 400 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 459 | ||||| || ||||||||||||| |||||| || |||||||| |||| |||||||||| Sbjct: 137043 caagcacggcaagcatcttgttgatgcggtccgcgatctcctcggtggaggggatcctgg 137102 Query: 460 gggagtggatgtc 472 ||||||||||||| Sbjct: 137103 gggagtggatgtc 137115
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 168 bits (85), Expect = 1e-38 Identities = 166/193 (86%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 |||| |||| || |||||| ||||||| || || ||||||||||| || || || || | Sbjct: 25397746 tggcaagctgggtgcggatgagcttggcagcatctaccatgttggttagtgcaggtttca 25397687 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| ||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||| Sbjct: 25397686 cctcggtgtatttgcgggtcttgagaccgcggtcagggttcacctagaggatgttggtgt 25397627 Query: 400 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 459 | ||||| || ||||||||||||| |||||| || |||||||| |||| |||||||||| Sbjct: 25397626 caagcacggcaagcatcttgttgatgcggtccgcgatctcctcggtggaggggatcctgg 25397567 Query: 460 gggagtggatgtc 472 ||||||||||||| Sbjct: 25397566 gggagtggatgtc 25397554
>ref|XM_469072.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1149 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Plus Query: 339 acctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtg 398 ||||||| ||| ||||||||||||||||||| ||| ||||||||| |||||||||||||| Sbjct: 944 acctcggtgtatttgcgggtcttgagaccgcggtcagggttcacctagaggatgttggtg 1003 Query: 399 tcgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctg 458 || ||||| || ||||||||||||| |||||| || |||||||| |||| ||||||||| Sbjct: 1004 tcaagcacggcaagcatcttgttgatgcggtccgcgatctcctcggtggaggggatcctg 1063 Query: 459 ggggagtggatgtc 472 |||||||||||||| Sbjct: 1064 ggggagtggatgtc 1077
>emb|Z49150.1|CBKPMETGN C.blumei kinetoplast met gene for cobalamine-independent methionine synthase Length = 2795 Score = 117 bits (59), Expect = 3e-23 Identities = 122/143 (85%) Strand = Plus / Minus Query: 333 ggcttgacctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatg 392 ||||| ||||| ||||| ||||||||||||||||| ||||| ||||||||||| | |||| Sbjct: 2412 ggcttcacctcagcgtatttgcgggtcttgagaccacagtcagggttcacccacaagatg 2353 Query: 393 ttggtgtcgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacggg 452 ||||| || || ||||| ||||||||||||| | ||| |||||||| || | || ||| Sbjct: 2352 ttggtttcaaggacagcaagcatcttgttgatcctgtcagcaatctcttctgttgatggg 2293 Query: 453 atcctgggggagtggatgtcgta 475 || |||||||||||||||||||| Sbjct: 2292 attctgggggagtggatgtcgta 2270
>emb|X83499.1|CRMETS C.roseus MetE mRNA for methionine synthase Length = 2602 Score = 107 bits (54), Expect = 3e-20 Identities = 87/98 (88%) Strand = Plus / Minus Query: 345 gcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcgagc 404 ||||||||||||||||||||||| ||||||||||| ||||| | |||||||||||| | | Sbjct: 2272 gcgtacttgcgggtcttgagaccacagtcggggttaacccacaagatgttggtgtccaac 2213 Query: 405 acagcgagcatcttgttgacgcggtcggcaatctcctc 442 || || ||||||||||||| | ||||||||||||||| Sbjct: 2212 actgcaagcatcttgttgattctgtcggcaatctcctc 2175
>gb|AF096261.1|AF096261 Lycopersicon esculentum ethylene-responsive methionine synthase (ER69) mRNA, partial cds Length = 206 Score = 105 bits (53), Expect = 1e-19 Identities = 125/149 (83%) Strand = Plus / Minus Query: 327 agggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccag 386 ||||| ||||| ||||||| ||||||||| ||||||||||| ||||||||||||||||| Sbjct: 171 agggctggcttcacctcggtgtacttgcgagtcttgagaccacagtcggggttcacccac 112 Query: 387 aggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttg 446 | |||||||||||| || || || ||||||||||| || | | |||||||||| || | Sbjct: 111 aagatgttggtgtcaaggactgcaagcatcttgttaactctgacggcaatctcttcggtt 52 Query: 447 gacgggatcctgggggagtggatgtcgta 475 || || || || || |||||||||||||| Sbjct: 51 gatggtattcttggagagtggatgtcgta 23
>gb|AF082893.1| Solanum tuberosum methionine synthase (MS) mRNA, complete cds Length = 2644 Score = 97.6 bits (49), Expect = 3e-17 Identities = 124/149 (83%) Strand = Plus / Minus Query: 327 agggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccag 386 ||||| ||||| ||||||| ||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2296 agggctggcttcacctcggtgtacttgcgagtcttgagaccacagtcagggttcacccat 2237 Query: 387 aggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttg 446 | |||||||||||| || || || ||||||||||| || | ||| |||||||| || | Sbjct: 2236 aagatgttggtgtcaagaactgcaagcatcttgttaactctgtcagcaatctcttcggtt 2177 Query: 447 gacgggatcctgggggagtggatgtcgta 475 || || || || || |||||||||||||| Sbjct: 2176 gatggtattcttggagagtggatgtcgta 2148
>gb|AF220054.1|AF220054 Coffea arabica methionine synthase mRNA, partial cds Length = 680 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/160 (82%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 |||| |||| || |||||| ||||||||||| | |||||||| |||||| ||||| | Sbjct: 646 tggcaagctgggtgcggatttgcttggcggcggcaaccatgttttggagggccggcttca 587 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||| ||||||||||||||||||||||| || || ||||| ||||| | |||||| || | Sbjct: 586 cctcagcgtacttgcgggtcttgagaccacaatcagggttgacccacaagatgttcgtat 527 Query: 400 cgagcacagcgagcatcttgttgacgcggtcggcaatctc 439 | ||||| || ||||||||||| || | ||| |||||||| Sbjct: 526 ccagcactgcaagcatcttgttaactctgtcagcaatctc 487
>ref|NM_121798.2| Arabidopsis thaliana ATCIMS (COBALAMIN-INDEPENDENT METHIONINE SYNTHASE); 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase AT5G17920 (ATCIMS) mRNA, complete cds Length = 2682 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2379 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2320 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2319 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2260 Query: 400 cgagcacagcgagcatcttgttgac 424 | || ||||| |||||||||||||| Sbjct: 2259 ctaggacagcaagcatcttgttgac 2235
>gb|AF518566.1| Glycine max methionine synthase mRNA, complete cds Length = 2695 Score = 89.7 bits (45), Expect = 8e-15 Identities = 93/109 (85%) Strand = Plus / Minus Query: 315 accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcg 374 |||||||| |||||||| ||||| ||||| | |||||| ||||||||||| || ||||| Sbjct: 2326 accatgtttgtgagggctggcttcacctcagtgtacttacgggtcttgagcccacagtca 2267 Query: 375 gggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttga 423 ||||||||||| | |||||| | |||||||| || ||||||||||||| Sbjct: 2266 gggttcacccacaagatgttcttctcgagcactgccagcatcttgttga 2218
>gb|BT000691.1| Arabidopsis thaliana clone RAFL08-16-E05 (R11047) putative 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (At5g17920) mRNA, complete cds Length = 2585 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2372 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2313 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2312 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2253 Query: 400 cgagcacagcgagcatcttgttgac 424 | || ||||| |||||||||||||| Sbjct: 2252 ctaggacagcaagcatcttgttgac 2228
>gb|AY091692.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2298 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2287 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2228 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2227 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2168 Query: 400 cgagcacagcgagcatcttgttgac 424 | || ||||| |||||||||||||| Sbjct: 2167 ctaggacagcaagcatcttgttgac 2143
>gb|AY070771.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2648 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 400 cgagcacagcgagcatcttgttgac 424 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>gb|AY069876.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2594 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 400 cgagcacagcgagcatcttgttgac 424 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>emb|AJ608673.1| Arabidopsis thaliana mRNA for cobalamin-independent methionine synthase (atms1 gene) Length = 2326 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2292 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagcgcaggcttga 2233 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2232 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2173 Query: 400 cgagcacagcgagcatcttgttgac 424 | || ||||| |||||||||||||| Sbjct: 2172 ctaggacagcaagcatcttgttgac 2148
>gb|AY057499.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2613 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 400 cgagcacagcgagcatcttgttgac 424 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>gb|AY057478.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2608 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 400 cgagcacagcgagcatcttgttgac 424 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>gb|AY056098.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2460 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 400 cgagcacagcgagcatcttgttgac 424 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>dbj|AK222123.1| Arabidopsis thaliana mRNA for 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase, complete cds, clone: RAFL22-94-C14 Length = 1684 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 1397 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 1338 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 1337 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 1278 Query: 400 cgagcacagcgagcatcttgttgac 424 | || ||||| |||||||||||||| Sbjct: 1277 ctaggacagcaagcatcttgttgac 1253
>gb|AY048201.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2549 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 400 cgagcacagcgagcatcttgttgac 424 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>gb|AF370522.1|AF370522 Arabidopsis thaliana cobalamin-independent methionine synthase (MPI7.9) mRNA, complete cds Length = 2646 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 400 cgagcacagcgagcatcttgttgac 424 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>emb|BX831470.1|CNS0A1W8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS94ZC02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1156 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 917 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 858 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 857 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 798 Query: 400 cgagcacagcgagcatcttgttgac 424 | || ||||| |||||||||||||| Sbjct: 797 ctaggacagcaagcatcttgttgac 773
>emb|BX833585.1|CNS09Z4M Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL64ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 601 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 319 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 260 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 259 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 200 Query: 400 cgagcacagcgagcatcttgttgac 424 | || ||||| |||||||||||||| Sbjct: 199 ctaggacagcaagcatcttgttgac 175
>dbj|AB011480.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPI7 Length = 40548 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 39733 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 39674 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 39673 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 39614 Query: 400 cgagcacagcgagcatcttgttgac 424 | || ||||| |||||||||||||| Sbjct: 39613 ctaggacagcaagcatcttgttgac 39589
>gb|U97200.1|ATU97200 Arabidopsis thaliana cobalamin-independent methionine synthase (ATCIMS) mRNA, complete cds Length = 2595 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2295 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2236 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2235 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2176 Query: 400 cgagcacagcgagcatcttgttgac 424 | || ||||| |||||||||||||| Sbjct: 2175 ctaggacagcaagcatcttgttgac 2151
>gb|BT012108.1| Arabidopsis thaliana At5g17920 mRNA sequence Length = 2295 Score = 81.8 bits (41), Expect = 2e-12 Identities = 119/145 (82%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| |||| || || || |||||||| |||| || |||||| Sbjct: 2284 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttgg 2225 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 399 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2224 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2165 Query: 400 cgagcacagcgagcatcttgttgac 424 | || ||||| |||||||||||||| Sbjct: 2164 ctaggacagcaagcatcttgttgac 2140
>dbj|AK221003.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-65-M04 Length = 390 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 280 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 339 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 103 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 44 Query: 340 cctcggcgtacttgcgggtcttgagaccgcagtcggggtt 379 |||||| |||||| |||||||||||||| ||||| ||||| Sbjct: 43 cctcggtgtacttacgggtcttgagaccacagtcagggtt 4
>gb|U84889.1|MCU84889 Mesembryanthemum crystallinum methionine synthase (MetE) mRNA, complete cds Length = 2734 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Minus Query: 336 ttgacctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttg 395 |||||||| ||||||| |||||||||||||| ||||||||||||||||| | || |||| Sbjct: 2351 ttgacctcaccgtacttacgggtcttgagaccacagtcggggttcacccacaagacgttg 2292 Query: 396 gtgtcgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatc 455 | || | || || |||||||| ||| ||| || |||| |||||| ||| |||||| Sbjct: 2291 ctttccaagactgcaagcatcttcctgatgcgatcagcaagctcctcggtgggtgggatc 2232 Query: 456 ctgggggagtggatgtcgta 475 || || |||||||||||||| Sbjct: 2231 ctaggagagtggatgtcgta 2212
>ref|XM_952059.1| Neurospora crassa OR74A hypothetical protein (NCU06512.1) partial mRNA Length = 2310 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 302 cttggcggcctcgaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtctt 361 |||||||||||| ||||||| || |||||| ||||||||| | ||||||||||||| Sbjct: 2277 cttggcggcctcaaccatgtgggagagggcacccttgacctcatcccacttgcgggtctt 2218 Query: 362 gagaccgcagtcggggttcacccagag 388 ||||||||||||||||| | |||||| Sbjct: 2217 aagaccgcagtcggggttgatccagag 2191
>ref|XM_326366.1| Neurospora crassa OR74A hypothetical protein (NCU06512.1) partial mRNA Length = 2310 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 302 cttggcggcctcgaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtctt 361 |||||||||||| ||||||| || |||||| ||||||||| | ||||||||||||| Sbjct: 2277 cttggcggcctcaaccatgtgggagagggcacccttgacctcatcccacttgcgggtctt 2218 Query: 362 gagaccgcagtcggggttcacccagag 388 ||||||||||||||||| | |||||| Sbjct: 2217 aagaccgcagtcggggttgatccagag 2191
>gb|AF404820.1|AF404820 Neurospora crassa methionine synthase (met-8) gene, complete cds Length = 3269 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 302 cttggcggcctcgaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtctt 361 |||||||||||| ||||||| || |||||| ||||||||| | ||||||||||||| Sbjct: 2643 cttggcggcctcaaccatgtgggagagggcacccttgacctcatcccacttgcgggtctt 2584 Query: 362 gagaccgcagtcggggttcacccagag 388 ||||||||||||||||| | |||||| Sbjct: 2583 aagaccgcagtcggggttgatccagag 2557
>emb|AM158915.1| Plantago major partial mRNA for methionine synthase (met1 gene) Length = 772 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 356 ggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcgagcacagcgagcat 415 |||||| ||||| ||||| ||||| ||||| || |||||||| |||||||| || ||||| Sbjct: 400 ggtcttcagaccacagtcagggttgacccatagaatgttggtctcgagcacggcaagcat 341 Query: 416 cttgtt 421 |||||| Sbjct: 340 cttgtt 335
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 351 ttgcgggtcttgagaccgcagtcggggttcaccca 385 |||||||||||||| |||||||||||||| ||||| Sbjct: 2998441 ttgcgggtcttgagcccgcagtcggggttgaccca 2998407 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 cgccttggcgagctcggcgcg 295 ||||||||||||||||||||| Sbjct: 384455 cgccttggcgagctcggcgcg 384475
>gb|AY662341.1| Medicago sativa methionine synthase mRNA, partial cds Length = 552 Score = 52.0 bits (26), Expect = 0.002 Identities = 101/126 (80%) Strand = Plus / Minus Query: 347 gtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcgagcac 406 ||||||||||||||| || || ||||| ||||| ||||| | ||||| | || || || Sbjct: 549 gtacttgcgggtctttagcccacagtcagggttgacccacaaaatgttcttctcaaggac 490 Query: 407 agcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggggagtg 466 ||| ||||||||||||| | |||||| |||||||| | | ||||| || |||||||| Sbjct: 489 agcaagcatcttgttgatcctgtcggcgatctcctcagttggtgggattcttggggagtg 430 Query: 467 gatgtc 472 |||||| Sbjct: 429 gatgtc 424
>ref|XM_751988.1| Ustilago maydis 521 hypothetical protein (UM00934.1) partial mRNA Length = 2304 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 354 cgggtcttgagaccgcagtcggggttcacccaga 387 |||||||||||||| ||||||||||| ||||||| Sbjct: 2228 cgggtcttgagaccacagtcggggttgacccaga 2195
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 357 gtcttgagaccgcagtcggggttcaccca 385 ||||||||||||||||| ||||||||||| Sbjct: 1027924 gtcttgagaccgcagtccgggttcaccca 1027896
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 353 gcgggtcttgagaccgcagtcggggttcaccca 385 ||||||||| ||||||||||||||||| ||||| Sbjct: 136480 gcgggtcttcagaccgcagtcggggttgaccca 136448
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 353 gcgggtcttgagaccgcagtcggggttcaccca 385 |||||||||||| |||||||||||||| ||||| Sbjct: 3542175 gcgggtcttgaggccgcagtcggggttgaccca 3542207 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 306 gcggcctcgaccatgttggtgagggcgg 333 ||||||||||||||||||| |||||||| Sbjct: 3542128 gcggcctcgaccatgttggcgagggcgg 3542155
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 353 gcgggtcttgagaccgcagtcggggttcaccca 385 ||||||||| ||||||||||||||||| ||||| Sbjct: 2498626 gcgggtcttcagaccgcagtcggggttgaccca 2498594
>gb|AF263012.1|AF263011S2 Streptomyces griseus subsp. griseus macrotetrolide biosynthesis gene cluster, downstream region Length = 10029 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 353 gcgggtcttgagaccgcagtcggggttcaccca 385 ||||||||| || |||||||||||||||||||| Sbjct: 6613 gcgggtcttcaggccgcagtcggggttcaccca 6645
>ref|NM_122107.2| Arabidopsis thaliana 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase AT5G20980 mRNA, complete cds Length = 2728 Score = 46.1 bits (23), Expect = 0.10 Identities = 47/55 (85%) Strand = Plus / Minus Query: 369 cagtcggggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttga 423 ||||| ||||||||||| |||| ||| |||| || ||||| ||||||||||||| Sbjct: 2348 cagtcagggttcacccaaaggactttgctgtccagaacagcaagcatcttgttga 2294
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 351 ttgcgggtcttgagaccgcagtcggggttcaccca 385 ||||||||||| || |||||||||||||| ||||| Sbjct: 1258681 ttgcgggtcttcagtccgcagtcggggttgaccca 1258715
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 46.1 bits (23), Expect = 0.10 Identities = 59/71 (83%) Strand = Plus / Minus Query: 315 accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcg 374 ||||| |||||||| ||||| |||||||||| | | ||||||||| | ||||||||| Sbjct: 2773099 accatattggtgagcgcggggatgacctcggcccattggcgggtcttcaagccgcagtcg 2773040 Query: 375 gggttcaccca 385 || |||||||| Sbjct: 2773039 ggattcaccca 2773029
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 351 ttgcgggtcttgagaccgcagtcggggttcaccca 385 ||||||||||| || |||||||||||||| ||||| Sbjct: 225347 ttgcgggtcttcagtccgcagtcggggttgaccca 225381
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 351 ttgcgggtcttgagaccgcagtcggggttcaccca 385 ||||||||||| || |||||||||||||| ||||| Sbjct: 273505 ttgcgggtcttcagtccgcagtcggggttgaccca 273539
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 354 cgggtcttgagaccgcagtcggggttcacccagag 388 |||||||||||||||||||| ||||| | |||||| Sbjct: 2186998 cgggtcttgagaccgcagtcagggttgatccagag 2186964
>emb|AJ608675.1| Arabidopsis thaliana mRNA for cobalamin-independent methionine synthase (atms3 gene) Length = 2464 Score = 46.1 bits (23), Expect = 0.10 Identities = 47/55 (85%) Strand = Plus / Minus Query: 369 cagtcggggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttga 423 ||||| ||||||||||| |||| ||| |||| || ||||| ||||||||||||| Sbjct: 2343 cagtcagggttcacccaaaggactttgctgtccagaacagcaagcatcttgttga 2289
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 Length = 96102 Score = 46.1 bits (23), Expect = 0.10 Identities = 47/55 (85%) Strand = Plus / Plus Query: 369 cagtcggggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttga 423 ||||| ||||||||||| |||| ||| |||| || ||||| ||||||||||||| Sbjct: 68186 cagtcagggttcacccaaaggactttgctgtccagaacagcaagcatcttgttga 68240
>dbj|AK107388.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-C09, full insert sequence Length = 2566 Score = 46.1 bits (23), Expect = 0.10 Identities = 71/87 (81%) Strand = Plus / Minus Query: 302 cttggcggcctcgaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtctt 361 ||||||||| | ||||| |||||||||||||| |||| ||| ||| ||||||||| Sbjct: 2337 cttggcggcgttgaccaagttggtgagggcggtcttggtctccttccactggcgggtctt 2278 Query: 362 gagaccgcagtcggggttcacccagag 388 ||||||||| || ||||| | |||||| Sbjct: 2277 gagaccgcaatcagggttgatccagag 2251
>ref|NM_208514.1| Eremothecium gossypii ABR212Cp (ABR212C), mRNA Length = 2307 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 300 tgcttggcggcctcgaccatgttggtgaggg 330 ||||||||||| ||||||||||| ||||||| Sbjct: 2276 tgcttggcggcttcgaccatgtttgtgaggg 2246
>gb|U36197.1|CRU36197 Chlamydomonas reinhardtii cobalamin-independent methionine synthase mRNA, complete cds Length = 2927 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 357 gtcttgagaccgcagtcggggttcacccaga 387 |||||||| |||||||||||||| ||||||| Sbjct: 2355 gtcttgaggccgcagtcggggttgacccaga 2325
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 300 tgcttggcggcctcgaccatgttggtgaggg 330 ||||||||||| ||||||||||| ||||||| Sbjct: 802422 tgcttggcggcttcgaccatgtttgtgaggg 802452
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 354 cgggtcttgagaccgcagtcggggtt 379 |||||||||||||| ||||||||||| Sbjct: 674963 cgggtcttgagaccacagtcggggtt 674938
>ref|XM_567704.1| Cryptococcus neoformans var. neoformans JEC21 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase (CNK02310) partial mRNA Length = 2623 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 354 cgggtcttgagaccgcagtcggggtt 379 |||||||||||||| ||||||||||| Sbjct: 2252 cgggtcttgagaccacagtcggggtt 2227
>gb|BC034830.1| Mus musculus cDNA clone MGC:28753 IMAGE:4483004, complete cds Length = 2755 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Minus Query: 348 tacttgcgggtcttgagaccgcagtcggggttcaccca 385 ||||| |||||||||||||| || || ||||||||||| Sbjct: 2357 tacttacgggtcttgagaccacaatcagggttcaccca 2320
>gb|BC032196.1| Mus musculus cDNA clone MGC:38244 IMAGE:5324059, complete cds Length = 2766 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Minus Query: 348 tacttgcgggtcttgagaccgcagtcggggttcaccca 385 ||||| |||||||||||||| || || ||||||||||| Sbjct: 2368 tacttacgggtcttgagaccacaatcagggttcaccca 2331
>emb|AL672113.1|MLO672113 Mesorhizobium loti R7A symbiosis island; segment 2/4 Length = 152050 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 360 ttgagaccgcagtcggggttcaccca 385 ||||||||||||||||| |||||||| Sbjct: 45699 ttgagaccgcagtcgggattcaccca 45674
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 360 ttgagaccgcagtcggggttcaccca 385 ||||||||||||||||| |||||||| Sbjct: 4954785 ttgagaccgcagtcgggattcaccca 4954810
>gb|AC002983.1| Arabidopsis thaliana BAC T3F12 from chromosome IV near 24 cM, complete sequence Length = 107183 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 acaaactcagacacagatgaa 57 ||||||||||||||||||||| Sbjct: 44288 acaaactcagacacagatgaa 44308
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 atctgcttggcggcctcgacc 317 ||||||||||||||||||||| Sbjct: 428585 atctgcttggcggcctcgacc 428565
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 atctgcttggcggcctcgacc 317 ||||||||||||||||||||| Sbjct: 3276151 atctgcttggcggcctcgacc 3276131
>gb|AC146417.3| Pan troglodytes BAC clone RP43-29B12 from 7, complete sequence Length = 196843 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 ccagattattcaaagtaaaac 199 ||||||||||||||||||||| Sbjct: 160771 ccagattattcaaagtaaaac 160791
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 353 gcgggtcttgagaccgcagtcggggttcaccca 385 |||||||||||| |||||||| ||||| ||||| Sbjct: 4708286 gcgggtcttgaggccgcagtccgggttgaccca 4708318
>emb|AL390766.16| Human DNA sequence from clone RP13-348N17 on chromosome 10 Contains part of the PARD3 gene for par-3 partitioning defective 3 homolog (C.elegans), complete sequence Length = 193131 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 ccagattattcaaagtaaaac 199 ||||||||||||||||||||| Sbjct: 157149 ccagattattcaaagtaaaac 157169
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 atctgcttggcggcctcgacc 317 ||||||||||||||||||||| Sbjct: 3007326 atctgcttggcggcctcgacc 3007306
>emb|AL161512.2|ATCHRIV24 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 24 Length = 199362 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 acaaactcagacacagatgaa 57 ||||||||||||||||||||| Sbjct: 102892 acaaactcagacacagatgaa 102872
>emb|AL161501.2|ATCHRIV13 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 13 Length = 200001 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 acaaactcagacacagatgaa 57 ||||||||||||||||||||| Sbjct: 171894 acaaactcagacacagatgaa 171914
>gb|AE005950.1| Caulobacter crescentus CB15 section 276 of 359 of the complete genome Length = 12754 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 290 ggcgcggatctgcttggcggcctcg 314 ||||||||||| ||||||||||||| Sbjct: 7030 ggcgcggatctccttggcggcctcg 7006
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 296 gatctgcttggcggcctcgaccatg 320 ||||||||||||||| ||||||||| Sbjct: 4608560 gatctgcttggcggcttcgaccatg 4608536
>gb|AC006217.4| Arabidopsis thaliana chromosome 2 clone T13E11 map mi310, complete sequence Length = 95959 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 acaaactcagacacagatgaa 57 ||||||||||||||||||||| Sbjct: 66687 acaaactcagacacagatgaa 66707
>gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete genome Length = 335593 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 cggcaatctcctccttggacg 450 ||||||||||||||||||||| Sbjct: 249712 cggcaatctcctccttggacg 249692
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 tcttgagaccgcagtcggggt 378 ||||||||||||||||||||| Sbjct: 1287116 tcttgagaccgcagtcggggt 1287136
>dbj|AB017069.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNJ8 Length = 88128 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 acaaactcagacacagatgaa 57 ||||||||||||||||||||| Sbjct: 51659 acaaactcagacacagatgaa 51639
>gb|AF118223.2|T4B21 Arabidopsis thaliana BAC T4B21 Length = 91470 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 acaaactcagacacagatgaa 57 ||||||||||||||||||||| Sbjct: 60216 acaaactcagacacagatgaa 60236
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 357 gtcttgagaccgcagtcggggttcaccca 385 |||||||| |||||||||||||| ||||| Sbjct: 1601527 gtcttgaggccgcagtcggggttgaccca 1601499
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 414 atcttgttgacgcggtcggcaatc 437 |||||||||||||||||| ||||| Sbjct: 2475457 atcttgttgacgcggtcgccaatc 2475480
>ref|XM_659310.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6798.2), mRNA Length = 1620 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 cgagcacagcgagcatcttg 419 |||||||||||||||||||| Sbjct: 811 cgagcacagcgagcatcttg 792
>gb|AY502077.1| Venturia inaequalis microsatellite TG9/129 sequence Length = 542 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 353 gcgggtcttgagaccgcagtcggggttcacccagag 388 ||||||||||||||| ||||| ||||| | |||||| Sbjct: 53 gcgggtcttgagaccacagtctgggttgatccagag 18
>emb|Z94723.1|MLCB33 Mycobacterium leprae cosmid B33 Length = 42224 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 354 cgggtcttgagaccgcagtcggggttcaccca 385 |||||||| || |||||||||||||| ||||| Sbjct: 25598 cgggtcttcagcccgcagtcggggttaaccca 25567
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 cgccttggcgagctcggcgcggat 298 ||||||||||||||||| |||||| Sbjct: 61299 cgccttggcgagctcggggcggat 61276
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 cgccttggcgagctcggcgcggat 298 ||||||||||||||||| |||||| Sbjct: 344059 cgccttggcgagctcggggcggat 344036
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 cgccttggcgagctcggcgcggat 298 ||||||||||||||||| |||||| Sbjct: 134631 cgccttggcgagctcggggcggat 134654
>emb|AL583920.1|MLEPRTN4 Mycobacterium leprae strain TN complete genome; segment 4/10 Length = 348450 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 354 cgggtcttgagaccgcagtcggggttcaccca 385 |||||||| || |||||||||||||| ||||| Sbjct: 127850 cgggtcttcagcccgcagtcggggttaaccca 127881
>gb|AC105923.6| Homo sapiens BAC clone RP11-641A24 from 4, complete sequence Length = 154354 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 cagacacagatgaacaattc 63 |||||||||||||||||||| Sbjct: 6355 cagacacagatgaacaattc 6336
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cttggcggcctcgaccatgt 321 |||||||||||||||||||| Sbjct: 528455 cttggcggcctcgaccatgt 528436
>gb|AF226997.1| Cladosporium fulvum methionine synthase gene, complete cds Length = 2307 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 353 gcgggtcttgagaccgcagtcggggttcacccagag 388 ||||||||||||||| ||||| ||||| | |||||| Sbjct: 2232 gcgggtcttgagaccacagtctgggttgatccagag 2197
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 atgaacaattcgccactcaa 72 |||||||||||||||||||| Sbjct: 41912770 atgaacaattcgccactcaa 41912751
>dbj|AB221011.1| Beta vulgaris BvMS1 mRNA for methionine synthase, complete cds Length = 2720 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 354 cgggtcttgagaccgcagtcggggttcaccca 385 |||||||||||||| || || ||||||||||| Sbjct: 2305 cgggtcttgagaccacaatcagggttcaccca 2274
>gb|AC084449.1|AC084449 Caenorhabditis briggsae cosmid CB021P23, complete sequence Length = 90243 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 agaaattttgtaatttgaaa 24 |||||||||||||||||||| Sbjct: 72882 agaaattttgtaatttgaaa 72901
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 atgaacaattcgccactcaa 72 |||||||||||||||||||| Sbjct: 14847 atgaacaattcgccactcaa 14828
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 354 cgggtcttgagaccgcagtcggggttcaccca 385 |||||||| ||||||||||| ||||| ||||| Sbjct: 1265044 cgggtcttcagaccgcagtccgggttgaccca 1265075
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 gtcttgagaccgcagtcggg 376 |||||||||||||||||||| Sbjct: 1313139 gtcttgagaccgcagtcggg 1313158
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 328 gggcgggcttgacctcggcgtact 351 |||||| ||||||||||||||||| Sbjct: 1408386 gggcggccttgacctcggcgtact 1408363 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,173,237 Number of Sequences: 3902068 Number of extensions: 3173237 Number of successful extensions: 60435 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 114 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 59283 Number of HSP's gapped (non-prelim): 1129 length of query: 475 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 453 effective length of database: 17,147,199,772 effective search space: 7767681496716 effective search space used: 7767681496716 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
