>BRCA2_RAT (O35923) Breast cancer type 2 susceptibility protein homolog (Fanconi|
            anemia group D1 protein homolog)
          Length = 3343

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 78   LMPHVASTSQTKLHGATVTEHMTSKYETNFSP 173
            + P +++T + KLH  TV E    K ETN SP
Sbjct: 1772 IFPKISATKEIKLHPQTVNEECVQKLETNASP 1803

>BRCA2_MOUSE (P97929) Breast cancer type 2 susceptibility protein homolog (Fanconi|
            anemia group D1 protein homolog)
          Length = 3329

 Score = 32.3 bits (72), Expect = 0.35
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 78   LMPHVASTSQTKLHGATVTEHMTSKYETNFSP 173
            + P V++T +  LH  T+ E+   K ETN SP
Sbjct: 1757 ISPRVSATKERNLHPQTINEYCVQKLETNTSP 1788

>MTFA_XYLFT (Q87AC0) Putative RNA 2'-O-ribose methyltransferase mtfA (EC|
           2.1.1.-)
          Length = 351

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 72  LKLMPHVASTSQTKLHGATVTEHMTSKYETNFSPGLCA 185
           LKL+P   S S  KL  A +T    ++ E    PG+CA
Sbjct: 176 LKLLPEAPSRSALKLEEALITLLTPNEREAKLRPGMCA 213

>GST3_SCHPO (Q9P6M1) Glutathione S-transferase III (EC 2.5.1.18) (GST-III)|
          Length = 242

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +3

Query: 18  HQTQIYKKIGARS----TELLLLKLMPHVASTSQTKLHGATVTEHMTSKYETNFSP 173
           ++ ++Y ++  R+    T+L  L   P V     T +  A + EH+  KY  +F P
Sbjct: 26  YEIKVYDRVDGRAPPAYTKLSPLGKSPIVVDDGVTYIESAAILEHLVRKYGPSFKP 81

>YHJ1_SCHPO (Q9C0V8) Probable transporter PB10D8.01|
          Length = 552

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 115 NLVWEVEATWGISFRSSSSVLLAPIFLYICVWCSV 11
           +L+  +EAT G+ F  S   LL P F   C  C++
Sbjct: 193 SLLPTMEATIGMFFPHSEQALLQPFFYISCYGCNI 227

>BRE1_YARLI (Q6CF78) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)|
          Length = 700

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 185 CTKPWRKICFIFTGHVFCH 129
           C+K W+       GHVFCH
Sbjct: 651 CSKNWKDTALKVCGHVFCH 669


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,120,432
Number of Sequences: 219361
Number of extensions: 398284
Number of successful extensions: 1270
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 80,573,946
effective HSP length: 41
effective length of database: 71,580,145
effective search space used: 1717923480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)