Clone Name | rbastl30c05 |
---|---|
Clone Library Name | barley_pub |
>emb|AL021919.4|HS1045J21 Human DNA sequence from clone RP5-1045J21 on chromosome 1q23.3-24.3 Contains part of the TNR gene for tenascin R (restrictin, janusin), a novel gene and one CpG island, complete sequence Length = 138636 Score = 42.1 bits (21), Expect = 0.63 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 atttttctccagggctttgtg 183 ||||||||||||||||||||| Sbjct: 20262 atttttctccagggctttgtg 20282
>emb|AL805951.6| Mouse DNA sequence from clone RP23-326P3 on chromosome 4, complete sequence Length = 197080 Score = 42.1 bits (21), Expect = 0.63 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 aaatatgaaacaaatttttct 170 ||||||||||||||||||||| Sbjct: 15017 aaatatgaaacaaatttttct 14997
>gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0092N01, complete sequence Length = 161741 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 cacaaatatacaagaaaata 44 |||||||||||||||||||| Sbjct: 138339 cacaaatatacaagaaaata 138358
>gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genomic sequence, complete sequence Length = 130193 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 cacaaatatacaagaaaata 44 |||||||||||||||||||| Sbjct: 60436 cacaaatatacaagaaaata 60417
>ref|XM_676129.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7952.2), mRNA Length = 2985 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gcttccacctcccagaccaa 112 |||||||||||||||||||| Sbjct: 1062 gcttccacctcccagaccaa 1043
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 cacaaatatacaagaaaata 44 |||||||||||||||||||| Sbjct: 25242272 cacaaatatacaagaaaata 25242291
>gb|AC162936.3| Mus musculus BAC clone RP23-108K5 from chromosome 14, complete sequence Length = 236917 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 caaacacaaatatacaagaa 40 |||||||||||||||||||| Sbjct: 130247 caaacacaaatatacaagaa 130266
>gb|AC015983.7| Homo sapiens BAC clone RP11-560I19 from 7, complete sequence Length = 177476 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gctagaagcaccgaactact 67 |||||||||||||||||||| Sbjct: 168312 gctagaagcaccgaactact 168293
>gb|AC101811.3| Mus musculus chromosome 19, clone RP24-295O9, complete sequence Length = 146963 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 agaacaccaaacacaaatat 33 |||||||||||||||||||| Sbjct: 58489 agaacaccaaacacaaatat 58470
>gb|AC109280.9| Mus musculus chromosome 18, clone RP23-400B7, complete sequence Length = 213683 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cagggctttgtgcattctgg 191 |||||||||||||||||||| Sbjct: 75708 cagggctttgtgcattctgg 75727
>gb|AC162444.2| Mus musculus chromosome 19, clone RP24-75M1, complete sequence Length = 197112 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 agaacaccaaacacaaatat 33 |||||||||||||||||||| Sbjct: 25664 agaacaccaaacacaaatat 25683
>emb|AL451048.13| Human DNA sequence from clone RP11-298A8 on chromosome Xq26.3-27.3 Contains the gene for a novel protein similar to SPANX family member B1 (SPANXB1) and a novel gene, complete sequence Length = 99793 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 caaacacaaatatacaagaaaata 44 |||||| ||||||||||||||||| Sbjct: 66692 caaacaaaaatatacaagaaaata 66715
>emb|AL136169.6| Human DNA sequence from clone RP4-809E13 on chromosome Xq26.1-27.1 Contains the CXX1 gene for CAAX box 1, two CAAX box 1 (CXX1) pseudogenes and three CpG islands, complete sequence Length = 67201 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 tacagaacaccaaacacaaa 30 |||||||||||||||||||| Sbjct: 38758 tacagaacaccaaacacaaa 38739
>gb|AC096310.9| Rattus norvegicus 1 BAC CH230-121B19 (Children's Hospital Oakland Research Institute) complete sequence Length = 218258 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 aatatgaaacaaatttttct 170 |||||||||||||||||||| Sbjct: 32814 aatatgaaacaaatttttct 32795
>emb|AL731726.11| Mouse DNA sequence from clone RP23-97P13 on chromosome 11 Contains a novel gene and a CpG island, complete sequence Length = 47745 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 tccagggctttgtgcattct 189 |||||||||||||||||||| Sbjct: 6685 tccagggctttgtgcattct 6666
>gb|AC117392.4| Homo sapiens 3 BAC RP11-6F2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147520 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 aaatatacaagaaaataggg 47 |||||||||||||||||||| Sbjct: 107141 aaatatacaagaaaataggg 107122
>gb|AC110025.4| Homo sapiens chromosome 8, clone CTD-2294G15, complete sequence Length = 108074 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 atatgaaacaaatttttctc 171 |||||||||||||||||||| Sbjct: 97295 atatgaaacaaatttttctc 97314
>gb|AC069359.5| Homo sapiens chromosome 8, clone CTD-2003P13, complete sequence Length = 86991 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 atatgaaacaaatttttctc 171 |||||||||||||||||||| Sbjct: 26971 atatgaaacaaatttttctc 26990
>gb|AC010321.8| Homo sapiens chromosome 16 clone CTD-2540M10, complete sequence Length = 207256 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 agaacaccaaacacaaatatacaa 37 ||||||| |||||||||||||||| Sbjct: 196518 agaacacaaaacacaaatatacaa 196495
>gb|AC093179.1| Homo sapiens chromosome 3 clone RP11-983J7 map 3p, complete sequence Length = 181321 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gaccaagttacacggagcta 126 |||||||||||||||||||| Sbjct: 169863 gaccaagttacacggagcta 169882
>ref|NM_070143.2| Caenorhabditis elegans JC8.6a (JC8.6) mRNA, complete cds Length = 1534 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 agtaaatatgaaacaaatttttct 170 |||||| ||||||||||||||||| Sbjct: 1501 agtaaaaatgaaacaaatttttct 1478
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 cacaaatatacaagaaaata 44 |||||||||||||||||||| Sbjct: 25333672 cacaaatatacaagaaaata 25333691
>gb|AC157911.5| Mus musculus chromosome 19, clone RP24-192F3, complete sequence Length = 168559 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 agaacaccaaacacaaatat 33 |||||||||||||||||||| Sbjct: 25105 agaacaccaaacacaaatat 25086
>gb|AC008938.9| Homo sapiens chromosome 16 clone CTD-2313J23, complete sequence Length = 99486 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 agaacaccaaacacaaatatacaa 37 ||||||| |||||||||||||||| Sbjct: 59716 agaacacaaaacacaaatatacaa 59693
>gb|AC019330.3| Homo sapiens BAC clone RP11-81N16 from 2, complete sequence Length = 167777 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 aacacaaatatacaagaaaa 42 |||||||||||||||||||| Sbjct: 43577 aacacaaatatacaagaaaa 43558
>gb|AC090937.2| Homo sapiens chromosome 3 clone RP11-316A10 map 3p, complete sequence Length = 160702 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 gaccaagttacacggagcta 126 |||||||||||||||||||| Sbjct: 48377 gaccaagttacacggagcta 48358
>emb|Z82274.1|CEJC8 Caenorhabditis elegans Cosmid JC8, complete sequence Length = 39553 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 agtaaatatgaaacaaatttttct 170 |||||| ||||||||||||||||| Sbjct: 17374 agtaaaaatgaaacaaatttttct 17351
>gb|AC161879.5| Mus musculus BAC clone RP23-264A15 from chromosome 1, complete sequence Length = 206995 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 acaaatttttctccagggctttgt 182 ||||| |||||||||||||||||| Sbjct: 136285 acaaacttttctccagggctttgt 136262
>emb|AL732538.6| Mouse DNA sequence from clone RP23-242O9 on chromosome 4, complete sequence Length = 172802 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 cagggctttgtgcattctgg 191 |||||||||||||||||||| Sbjct: 37548 cagggctttgtgcattctgg 37529
>gb|AC101978.6| Mus musculus chromosome 3, clone RP24-335I21, complete sequence Length = 185025 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 ccagggctttgtgcattct 189 ||||||||||||||||||| Sbjct: 21147 ccagggctttgtgcattct 21129
>gb|AC163610.4| Mus musculus BAC clone RP23-59P17 from chromosome 13, complete sequence Length = 237111 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 203545 gcatacagaacaccaaaca 203527
>gb|AC153727.6| Mus musculus BAC clone RP23-354L15 from chromosome 12, complete sequence Length = 202733 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 171 ccagggctttgtgcattctggtc 193 ||||||||| ||||||||||||| Sbjct: 80563 ccagggcttcgtgcattctggtc 80541
>gb|AC130542.4| Mus musculus chromosome 6 clone RP24-167F4, complete sequence Length = 192106 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 171 ccagggctttgtgcattct 189 ||||||||||||||||||| Sbjct: 172400 ccagggctttgtgcattct 172418
>gb|AC159309.2| Mus musculus BAC clone RP23-157H14 from chromosome 16, complete sequence Length = 201546 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 144633 gcatacagaacaccaaaca 144651
>gb|AC166331.5| Mus musculus chromosome 3, clone RP23-277D9, complete sequence Length = 187537 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 ccagggctttgtgcattct 189 ||||||||||||||||||| Sbjct: 170053 ccagggctttgtgcattct 170035
>gb|AC151808.1| Homo sapiens chromosome X clone RP11-1148L6 map p11.23, complete sequence Length = 37971 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 170 tccagggctttgtgcattctggt 192 |||| |||||||||||||||||| Sbjct: 19850 tccaaggctttgtgcattctggt 19872
>gb|AC115618.3| Homo sapiens chromosome X clone RP11-1148L6 map p11.23, complete sequence Length = 158454 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 170 tccagggctttgtgcattctggt 192 |||| |||||||||||||||||| Sbjct: 30520 tccaaggctttgtgcattctggt 30542
>gb|AC115793.14| Mus musculus chromosome 9, clone RP23-400G18, complete sequence Length = 199109 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 atacagaacaccaaacaca 28 ||||||||||||||||||| Sbjct: 81034 atacagaacaccaaacaca 81052
>gb|AC105164.12| Mus musculus chromosome 6, clone RP24-296I7, complete sequence Length = 178877 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 171 ccagggctttgtgcattct 189 ||||||||||||||||||| Sbjct: 97739 ccagggctttgtgcattct 97757
>gb|BC072945.1| Xenopus laevis MGC80528 protein, mRNA (cDNA clone MGC:80528 IMAGE:5157298), complete cds Length = 3302 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 aacacatgaccagtaaata 154 ||||||||||||||||||| Sbjct: 1793 aacacatgaccagtaaata 1811
>gb|AC103406.7| Mus musculus chromosome 9, clone RP23-106O8, complete sequence Length = 174604 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 171 ccagggctttgtgcattctggtc 193 |||||||||||||||| |||||| Sbjct: 10189 ccagggctttgtgcatgctggtc 10167
>gb|AC084315.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-353M17, complete sequence Length = 92644 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 46286 gcatacagaacaccaaaca 46268
>gb|AC147320.2| Pan troglodytes BAC clone RP43-44E12 from 7, complete sequence Length = 141313 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 aacaccaaacacaaatata 34 ||||||||||||||||||| Sbjct: 48661 aacaccaaacacaaatata 48679
>gb|AC121119.12| Mus musculus chromosome 1, clone RP23-395D10, complete sequence Length = 221436 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 141 atgaccagtaaatatgaaa 159 ||||||||||||||||||| Sbjct: 116641 atgaccagtaaatatgaaa 116659
>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome Length = 920079 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 aaatatgaaacaaattttt 168 ||||||||||||||||||| Sbjct: 913471 aaatatgaaacaaattttt 913453 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 aaatatgaaacaaattttt 168 ||||||||||||||||||| Sbjct: 856324 aaatatgaaacaaattttt 856306 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 aaatatgaaacaaattttt 168 ||||||||||||||||||| Sbjct: 646720 aaatatgaaacaaattttt 646702 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 150 aaatatgaaacaaattttt 168 ||||||||||||||||||| Sbjct: 397392 aaatatgaaacaaattttt 397410 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 150 aaatatgaaacaaattttt 168 ||||||||||||||||||| Sbjct: 282338 aaatatgaaacaaattttt 282356 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 aaatatgaaacaaattttt 168 ||||||||||||||||||| Sbjct: 266471 aaatatgaaacaaattttt 266453 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 aaatatgaaacaaattttt 168 ||||||||||||||||||| Sbjct: 152495 aaatatgaaacaaattttt 152477
>gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome Length = 897405 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 150 aaatatgaaacaaattttt 168 ||||||||||||||||||| Sbjct: 729649 aaatatgaaacaaattttt 729667 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 aaatatgaaacaaattttt 168 ||||||||||||||||||| Sbjct: 711056 aaatatgaaacaaattttt 711038 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 aaatatgaaacaaattttt 168 ||||||||||||||||||| Sbjct: 698096 aaatatgaaacaaattttt 698078 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 150 aaatatgaaacaaattttt 168 ||||||||||||||||||| Sbjct: 663260 aaatatgaaacaaattttt 663278 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 aaatatgaaacaaattttt 168 ||||||||||||||||||| Sbjct: 397968 aaatatgaaacaaattttt 397950 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 aaatatgaaacaaattttt 168 ||||||||||||||||||| Sbjct: 378504 aaatatgaaacaaattttt 378486
>gb|AC164155.2| Mus musculus BAC clone RP24-548I6 from chromosome 14, complete sequence Length = 215419 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 acgcatacagaacaccaaa 24 ||||||||||||||||||| Sbjct: 73721 acgcatacagaacaccaaa 73739
>gb|AC147376.4| Mus musculus BAC clone RP23-425F8 from chromosome 5, complete sequence Length = 199885 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 8 gcatacagaacaccaaacacaaa 30 ||||||||||||| ||||||||| Sbjct: 139885 gcatacagaacacgaaacacaaa 139863
>emb|CR937050.2| Rattus norvegicus chromosome 5 BAC CH230-339J16, complete sequence Length = 163260 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 22943 gcatacagaacaccaaaca 22925
>gb|AC109153.13| Mus musculus chromosome 15, clone RP23-51J23, complete sequence Length = 222164 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 144 accagtaaatatgaaacaa 162 ||||||||||||||||||| Sbjct: 98351 accagtaaatatgaaacaa 98369
>emb|AJ866288.1| Saccopteryx bilineata partial prkc1 gene for putative Protein Kinase C, iota type, exon 9 Length = 453 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 aaatatgaaacaaattttt 168 ||||||||||||||||||| Sbjct: 434 aaatatgaaacaaattttt 416
>gb|AC122485.3| Mus musculus BAC clone RP24-377J10 from chromosome 3, complete sequence Length = 157739 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 146 cagtaaatatgaaacaaat 164 ||||||||||||||||||| Sbjct: 143114 cagtaaatatgaaacaaat 143096
>gb|AC079325.10| Homo sapiens chromosome 17, clone RP11-194J3, complete sequence Length = 191746 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 acagaacaccaaacacaaa 30 ||||||||||||||||||| Sbjct: 143309 acagaacaccaaacacaaa 143327
>gb|AC084054.12| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-137N6, complete sequence Length = 231589 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 ccagggctttgtgcattct 189 ||||||||||||||||||| Sbjct: 8751 ccagggctttgtgcattct 8733
>gb|AC122191.4| Mus musculus BAC clone RP23-42J4 from 6, complete sequence Length = 250147 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 47281 gcatacagaacaccaaaca 47299
>gb|AC122258.4| Mus musculus BAC clone RP23-182F18 from 7, complete sequence Length = 186441 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 143 gaccagtaaatatgaaacaaatt 165 |||||||||||||||| |||||| Sbjct: 71984 gaccagtaaatatgaatcaaatt 72006
>emb|CR937053.2|RN476F3 Rattus norvegicus chromosome 1 BAC CH230-476F3, complete sequence Length = 139452 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 85217 gcatacagaacaccaaaca 85199
>gb|AC122045.3| Mus musculus BAC clone RP24-449H18 from 5, complete sequence Length = 142673 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 8 gcatacagaacaccaaacacaaa 30 ||||||||||||| ||||||||| Sbjct: 10094 gcatacagaacacgaaacacaaa 10072
>gb|AC117255.3| Mus musculus BAC clone RP24-481E4 from 3, complete sequence Length = 209706 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 110764 gcatacagaacaccaaaca 110746
>gb|AC104675.3| Sus scrofa clone RP44-122H18, complete sequence Length = 176345 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 164 tttttctccagggctttgt 182 ||||||||||||||||||| Sbjct: 102122 tttttctccagggctttgt 102104
>gb|AC146265.2| Pan troglodytes BAC clone RP43-28O21 from 7, complete sequence Length = 170419 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 aacaccaaacacaaatata 34 ||||||||||||||||||| Sbjct: 59715 aacaccaaacacaaatata 59733
>gb|AC010908.3| Homo sapiens BAC clone CTD-3073A19 from 7, complete sequence Length = 127989 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 aacaccaaacacaaatata 34 ||||||||||||||||||| Sbjct: 12829 aacaccaaacacaaatata 12847
>gb|AC119831.6| Mus musculus chromosome 9, clone RP23-281F13, complete sequence Length = 195918 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 171 ccagggctttgtgcattctggtc 193 |||||||||||||||| |||||| Sbjct: 6890 ccagggctttgtgcatgctggtc 6912
>gb|AC137877.6| Mus musculus chromosome 10, clone RP23-72A1, complete sequence Length = 172812 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 38342 gcatacagaacaccaaaca 38324
>gb|AC161825.13| Mus musculus 10 BAC RP23-35O24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199841 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 171 ccagggctttgtgcattct 189 ||||||||||||||||||| Sbjct: 197987 ccagggctttgtgcattct 198005
>ref|XM_660645.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.80569) partial mRNA Length = 2739 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 26 acaaatatacaagaaaata 44 ||||||||||||||||||| Sbjct: 1867 acaaatatacaagaaaata 1885
>gb|AC158622.4| Mus musculus 10 BAC RP23-292G1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232339 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 ccagggctttgtgcattct 189 ||||||||||||||||||| Sbjct: 147942 ccagggctttgtgcattct 147924
>gb|AC160109.2| Mus musculus BAC clone RP24-169I22 from chromosome 13, complete sequence Length = 151819 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 171 ccagggctttgtgcattct 189 ||||||||||||||||||| Sbjct: 90985 ccagggctttgtgcattct 91003
>emb|AL355526.9| Human DNA sequence from clone RP11-152L7 on chromosome 1 Contains two novel genes (IMAGE:4831124) and a CpG island, complete sequence Length = 142179 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 aaatatgaaacaaattttt 168 ||||||||||||||||||| Sbjct: 132998 aaatatgaaacaaattttt 132980
>emb|AL160152.20| Human DNA sequence from clone RP11-360H15 on chromosome 13, complete sequence Length = 175151 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 26 acaaatatacaagaaaata 44 ||||||||||||||||||| Sbjct: 93840 acaaatatacaagaaaata 93858
>emb|AL133267.9| Human DNA sequence from clone RP3-408B20 on chromosome 6 Contains a gene and two pseudogenes for 7 transmembrane receptor (rhodopsin family) (olfactory receptor like) proteins and a 60S acidic ribosomal protein P2 (RPLP2) pseudogene, complete sequence Length = 44788 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 35 caagaaaataggggctagaagca 57 |||||||||||||||||| |||| Sbjct: 2012 caagaaaataggggctaggagca 2034
>gb|AC162797.6| Mus musculus chromosome 8, clone RP23-293E17, complete sequence Length = 142444 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 13716 gcatacagaacaccaaaca 13698
>gb|AF007261.1| Reclinomonas americana mitochondrion, complete genome Length = 69034 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 148 gtaaatatgaaacaaattt 166 ||||||||||||||||||| Sbjct: 6336 gtaaatatgaaacaaattt 6354
>gb|AC161513.5| Mus musculus chromosome 3, clone RP23-238A12, complete sequence Length = 160438 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 146 cagtaaatatgaaacaaat 164 ||||||||||||||||||| Sbjct: 26176 cagtaaatatgaaacaaat 26158
>gb|AC163356.2| Mus musculus BAC clone RP23-13A21 from chromosome 6, complete sequence Length = 212612 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 203610 gcatacagaacaccaaaca 203628
>gb|AC153894.8| Mus musculus 6 BAC RP23-118E20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216116 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 ccagggctttgtgcattct 189 ||||||||||||||||||| Sbjct: 53953 ccagggctttgtgcattct 53935
>gb|AC161460.5| Mus musculus BAC clone RP23-125A3 from chromosome 14, complete sequence Length = 208571 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 acgcatacagaacaccaaa 24 ||||||||||||||||||| Sbjct: 149027 acgcatacagaacaccaaa 149045
>emb|AL645904.13| Mouse DNA sequence from clone RP23-121P11 on chromosome 11 Contains the gene for a novel protein (1700121K02Rik), the Hnrph1 gene for heterogeneous nuclear ribonucleoprotein H1, the Rufy1 gene for RUN and FYVE domain containing 1, a novel pseudogene and three CpG islands, complete sequence Length = 193696 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 171 ccagggctttgtgcattctggtc 193 |||||||||||||||| |||||| Sbjct: 167938 ccagggctttgtgcatgctggtc 167916
>emb|BX470119.17| Zebrafish DNA sequence from clone CH211-225L4 in linkage group 20, complete sequence Length = 106989 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 acagaacaccaaacacaaa 30 ||||||||||||||||||| Sbjct: 22628 acagaacaccaaacacaaa 22610
>emb|AL928984.5| Mouse DNA sequence from clone RP24-474O17 on chromosome 11 Contains a CpG island, complete sequence Length = 54243 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 aagaaaataggggctagaa 54 ||||||||||||||||||| Sbjct: 20727 aagaaaataggggctagaa 20745
>gb|AC123901.2| Homo sapiens chromosome 3 clone RP11-952G4, complete sequence Length = 217409 Score = 38.2 bits (19), Expect = 9.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 169 ctccagggctttgtgcattctggtctc 195 ||||||||||||||||| |||||||| Sbjct: 14765 ctccagggctttgtgcaagctggtctc 14791
>gb|AC087321.20| Homo sapiens 12 BAC RP11-606D9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 123010 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 149 taaatatgaaacaaatttttctc 171 ||||||| ||||||||||||||| Sbjct: 105848 taaatataaaacaaatttttctc 105826
>gb|AC104376.6| Homo sapiens chromosome 8, clone CTD-2242O8, complete sequence Length = 203348 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 acagaacaccaaacacaaa 30 ||||||||||||||||||| Sbjct: 179178 acagaacaccaaacacaaa 179160
>gb|AC007267.5| Arabidopsis thaliana chromosome 2 clone F27O10 map mi398, complete sequence Length = 55686 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 150 aaatatgaaacaaattttt 168 ||||||||||||||||||| Sbjct: 38383 aaatatgaaacaaattttt 38401
>gb|AC105925.5| Homo sapiens BAC clone RP11-753I4 from 4, complete sequence Length = 136197 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 139 acatgaccagtaaatatga 157 ||||||||||||||||||| Sbjct: 114399 acatgaccagtaaatatga 114381
>gb|AC099051.2| Homo sapiens chromosome 3 clone RP11-416A9, complete sequence Length = 174372 Score = 38.2 bits (19), Expect = 9.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 169 ctccagggctttgtgcattctggtctc 195 ||||||||||||||||| |||||||| Sbjct: 130457 ctccagggctttgtgcaagctggtctc 130483
>gb|DP000032.1| Felis catus target 116 genomic scaffold Length = 376810 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 26 acaaatatacaagaaaata 44 ||||||||||||||||||| Sbjct: 94290 acaaatatacaagaaaata 94272
>ref|XM_627379.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_4970), partial mRNA Length = 5004 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 26 acaaatatacaagaaaata 44 ||||||||||||||||||| Sbjct: 4132 acaaatatacaagaaaata 4150
>gb|AC158389.2| Mus musculus BAC clone RP24-476G13 from chromosome 12, complete sequence Length = 185533 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 56539 gcatacagaacaccaaaca 56557
>gb|AC010674.11| Homo sapiens chromosome 15 clone RP11-430B1 map 15q21.1, complete sequence Length = 214415 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 accaaacacaaatatacaa 37 ||||||||||||||||||| Sbjct: 3232 accaaacacaaatatacaa 3214
>gb|AC023906.7|AC023906 Homo sapiens chromosome 15 clone CTD-2184D3 map 15q21.2, complete sequence Length = 93287 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 accaaacacaaatatacaa 37 ||||||||||||||||||| Sbjct: 85240 accaaacacaaatatacaa 85222
>gb|AC011758.6|AC011758 Drosophila melanogaster, chromosome X, region 19C-19E, BAC clone BACR25I22, complete sequence Length = 164942 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 147 agtaaatatgaaacaaatt 165 ||||||||||||||||||| Sbjct: 95113 agtaaatatgaaacaaatt 95131
>gb|AC087772.5|AC087772 Genomic Sequence for Mus musculus, clone RP23-326L17, complete sequence Length = 218905 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 145560 gcatacagaacaccaaaca 145542
>gb|AC153954.3| Mus musculus 10 BAC RP24-236E2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 151818 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 130914 gcatacagaacaccaaaca 130896
>gb|AC158681.3| Mus musculus 6 BAC RP23-338E5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202460 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 ccagggctttgtgcattct 189 ||||||||||||||||||| Sbjct: 92350 ccagggctttgtgcattct 92332
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 caaacacaaatatacaaga 39 ||||||||||||||||||| Sbjct: 6980173 caaacacaaatatacaaga 6980155
>gb|AC079835.5| Homo sapiens BAC clone RP11-15O17 from 4, complete sequence Length = 165047 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 caaatatacaagaaaatag 45 ||||||||||||||||||| Sbjct: 53981 caaatatacaagaaaatag 53963
>gb|AC005540.4| Homo sapiens BAC clone RP11-533I8 from 2, complete sequence Length = 133761 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 aacacaaatatacaagaaa 41 ||||||||||||||||||| Sbjct: 30419 aacacaaatatacaagaaa 30437
>gb|AC068039.6| Homo sapiens BAC clone RP11-703L16 from 2, complete sequence Length = 199514 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 141 atgaccagtaaatatgaaa 159 ||||||||||||||||||| Sbjct: 78356 atgaccagtaaatatgaaa 78374
>gb|AC154177.2| Mus musculus BAC clone RP23-465J20 from chromosome 17, complete sequence Length = 206481 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 119837 gcatacagaacaccaaaca 119855
>emb|AL929240.18| Mouse DNA sequence from clone RP23-245A10 on chromosome 2, complete sequence Length = 180092 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 78792 gcatacagaacaccaaaca 78810
>gb|AC007382.3| Homo sapiens BAC clone RP11-288C18 from 2, complete sequence Length = 80547 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 61694 gcatacagaacaccaaaca 61676
>gb|AC020968.3| Mus musculus chromosome 18 clone RP23-193O23, complete sequence Length = 199704 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 91165 gcatacagaacaccaaaca 91147
>gb|AC092967.5| Homo sapiens 3 BAC RP11-521A24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179848 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 141 atgaccagtaaatatgaaa 159 ||||||||||||||||||| Sbjct: 24868 atgaccagtaaatatgaaa 24850
>ref|XM_574407.1| PREDICTED: Rattus norvegicus similar to hypothetical protein FLJ38944 (LOC499112), mRNA Length = 1132 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 11 tacagaacaccaaacacaa 29 ||||||||||||||||||| Sbjct: 1100 tacagaacaccaaacacaa 1082
>gb|AF546188.1| Contiguous genomic DNA sequence comprising the 19-kDa-zein gene family from Zea mays, complete sequence Length = 203363 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 149 taaatatgaaacaaatttt 167 ||||||||||||||||||| Sbjct: 112138 taaatatgaaacaaatttt 112120
>gb|AF272977.1|AF272977 Mycoplasma hyopneumoniae NtpJ protein (ntpJ) and insertion sequence ISMhp1 transposase (tnp) genes, complete cds Length = 3852 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 aaatatgaaacaaattttt 168 ||||||||||||||||||| Sbjct: 3190 aaatatgaaacaaattttt 3172
>dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492F05 Length = 159242 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 caaacacaaatatacaaga 39 ||||||||||||||||||| Sbjct: 147897 caaacacaaatatacaaga 147879
>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 caaacacaaatatacaaga 39 ||||||||||||||||||| Sbjct: 101991 caaacacaaatatacaaga 101973
>gb|AC022077.20| Homo sapiens 3 BAC RP11-34I16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158176 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 157 aaacaaatttttctccagg 175 ||||||||||||||||||| Sbjct: 68976 aaacaaatttttctccagg 68994
>gb|AC175034.1| Mus musculus BAC clone RP23-204E23 from chromosome 7, complete sequence Length = 208487 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 143 gaccagtaaatatgaaacaaatt 165 |||||||||||||||| |||||| Sbjct: 177912 gaccagtaaatatgaatcaaatt 177890
>gb|AC154502.2| Mus musculus BAC clone RP24-87I20 from chromosome 13, complete sequence Length = 183319 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 68428 gcatacagaacaccaaaca 68410
>gb|AC114632.9| Mus musculus chromosome 5, clone RP24-114E20, complete sequence Length = 160308 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 ccagggctttgtgcattct 189 ||||||||||||||||||| Sbjct: 76212 ccagggctttgtgcattct 76194
>dbj|AK101123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025J12, full insert sequence Length = 3202 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 caaacacaaatatacaaga 39 ||||||||||||||||||| Sbjct: 780 caaacacaaatatacaaga 762
>emb|BX936462.20| Zebrafish DNA sequence from clone CH211-147O6 in linkage group 20, complete sequence Length = 196432 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 acagaacaccaaacacaaa 30 ||||||||||||||||||| Sbjct: 34856 acagaacaccaaacacaaa 34874
>emb|AL929171.9| Zebrafish DNA sequence from clone CH211-132P20 in linkage group 4, complete sequence Length = 176577 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 146 cagtaaatatgaaacaaat 164 ||||||||||||||||||| Sbjct: 154612 cagtaaatatgaaacaaat 154594
>emb|CR937049.3| CH230-323M7, complete sequence Length = 198674 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 85738 gcatacagaacaccaaaca 85756
>gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 of 74 of the complete sequence Length = 302538 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 147 agtaaatatgaaacaaatt 165 ||||||||||||||||||| Sbjct: 197305 agtaaatatgaaacaaatt 197323
>dbj|AP002782.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-660M18, complete sequences Length = 153078 Score = 38.2 bits (19), Expect = 9.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 148 gtaaatatgaaacaaatttttctccag 174 ||||||| ||||| ||||||||||||| Sbjct: 133855 gtaaataagaaaccaatttttctccag 133881
>gb|AC105072.9| Mus musculus chromosome 5, clone RP24-167C6, complete sequence Length = 173710 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 171 ccagggctttgtgcattct 189 ||||||||||||||||||| Sbjct: 8678 ccagggctttgtgcattct 8696
>gb|AC154013.4| Mus musculus 6 BAC RP24-124B23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 151057 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 ccagggctttgtgcattct 189 ||||||||||||||||||| Sbjct: 77450 ccagggctttgtgcattct 77432
>gb|AC161343.14| Mus musculus chromosome 8, clone RP23-468H22, complete sequence Length = 182668 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 584 gcatacagaacaccaaaca 602
>emb|AL714024.31| Mouse DNA sequence from clone RP23-102H7 on chromosome 5, complete sequence Length = 213519 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 168 tctccagggctttgtgcat 186 ||||||||||||||||||| Sbjct: 94438 tctccagggctttgtgcat 94420
>emb|AL929069.10| Mouse DNA sequence from clone RP23-466O21 on chromosome 2, complete sequence Length = 118299 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 72722 gcatacagaacaccaaaca 72704
>gb|CP000217.1| Drosophila melanogaster genomic scaffold 211000022280770 Length = 268584 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 149 taaatatgaaacaaatttt 167 ||||||||||||||||||| Sbjct: 137977 taaatatgaaacaaatttt 137959
>gb|AC133181.2| Mus musculus BAC clone RP24-169F11 from 8, complete sequence Length = 140384 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 ccagggctttgtgcattct 189 ||||||||||||||||||| Sbjct: 71767 ccagggctttgtgcattct 71749
>gb|AC148326.2| Mus musculus BAC clone RP24-377D18 from 6, complete sequence Length = 177503 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 67369 gcatacagaacaccaaaca 67351
>emb|CT030688.5| Mouse DNA sequence from clone RP23-143G11 on chromosome 16, complete sequence Length = 203342 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 50215 gcatacagaacaccaaaca 50233
>emb|CT030242.6| Mouse DNA sequence from clone RP24-66D20 on chromosome 12, complete sequence Length = 193557 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 171 ccagggctttgtgcattctggtc 193 ||||||||| ||||||||||||| Sbjct: 177909 ccagggcttcgtgcattctggtc 177931
>gb|AC132433.3| Mus musculus BAC clone RP23-214L14 from 13, complete sequence Length = 229555 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 67 tgctcctgaagcttatgcc 85 ||||||||||||||||||| Sbjct: 95433 tgctcctgaagcttatgcc 95451
>gb|AC134907.5| Mus musculus BAC clone RP23-362K17 from 8, complete sequence Length = 186341 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 26 acaaatatacaagaaaata 44 ||||||||||||||||||| Sbjct: 157981 acaaatatacaagaaaata 157963
>gb|AC157945.2| Mus musculus BAC clone RP23-289C11 from chromosome 9, complete sequence Length = 216396 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 accaaacacaaatatacaa 37 ||||||||||||||||||| Sbjct: 97611 accaaacacaaatatacaa 97593
>emb|AL683881.12| Mouse DNA sequence from clone RP23-10M6 on chromosome 2, complete sequence Length = 155168 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 11255 gcatacagaacaccaaaca 11237
>emb|AL807777.6| Mouse DNA sequence from clone RP23-392C8 on chromosome X, complete sequence Length = 189607 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 86933 gcatacagaacaccaaaca 86915
>emb|AL772372.4| Mouse DNA sequence from clone RP23-375N21 on chromosome 2, complete sequence Length = 210503 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 cagaacaccaaacacaaat 31 ||||||||||||||||||| Sbjct: 141504 cagaacaccaaacacaaat 141522
>emb|AL669900.15| Mouse DNA sequence from clone RP23-254J17 on chromosome X, complete sequence Length = 207870 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 gcatacagaacaccaaaca 26 ||||||||||||||||||| Sbjct: 162647 gcatacagaacaccaaaca 162629
>dbj|D13469.1|MYCREQSEQ M.hyopneumoniae genome, repeated DNA sequence Length = 1807 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 150 aaatatgaaacaaattttt 168 ||||||||||||||||||| Sbjct: 1527 aaatatgaaacaaattttt 1545
>dbj|D26053.1|MYCVPP11 Mycoplasma hyopneumoniae DNA, transposon-like element encoding 3 ORFs (complete cds) Length = 5386 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 aaatatgaaacaaattttt 168 ||||||||||||||||||| Sbjct: 280 aaatatgaaacaaattttt 262
>dbj|AB065475.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds, isolate:CBRC7TM_38 Length = 1849 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 35 caagaaaataggggctagaagca 57 |||||||||||||||||| |||| Sbjct: 1791 caagaaaataggggctaggagca 1813 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,299,965 Number of Sequences: 3902068 Number of extensions: 2299965 Number of successful extensions: 183508 Number of sequences better than 10.0: 139 Number of HSP's better than 10.0 without gapping: 139 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 182927 Number of HSP's gapped (non-prelim): 581 length of query: 198 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 176 effective length of database: 17,147,199,772 effective search space: 3017907159872 effective search space used: 3017907159872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)