ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl30c01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MTAL1_KLULA (Q08398) Mating-type protein ALPHA1 (Transcription a... 30 2.3
2SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precur... 30 4.0
3IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit ... 30 4.0
4LEG12_MOUSE (Q91VD1) Galectin-12 29 6.8
5PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5) 28 8.9
6PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5) 28 8.9
7PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.... 28 8.9
8LGT_MANSM (Q65VJ7) Prolipoprotein diacylglyceryl transferase (EC... 28 8.9

>MTAL1_KLULA (Q08398) Mating-type protein ALPHA1 (Transcription activator|
           Alpha1p) (MATalpha1 protein)
          Length = 261

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 230 LQTIINTHVTSQKYTAQNWLLLTSQFLCGETPK 328
           L TII+ H T  K T +NW L+  ++ C  + K
Sbjct: 129 LSTIISKHWTVDKQTRKNWELIAQEYNCDASGK 161



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>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC|
           3.2.1.-) (Soluble cell wall protein 11)
          Length = 542

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +1

Query: 169 GSSKS*AAVAERPKSMASSFPPNNNQHSCNLAKIYSSKLAV 291
           GSS S AA+   PK++A  + P N+  SC  A   SS L +
Sbjct: 269 GSSSSSAAITSSPKAIA--YSPYNDDGSCKSADAVSSDLTL 307



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>IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34|
           (eIF-(iso)4F p82-34)
          Length = 788

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = -1

Query: 450 ISSHAAVVEACNSLLI 403
           +SSHAAVV+ACNSL I
Sbjct: 773 LSSHAAVVDACNSLSI 788



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>LEG12_MOUSE (Q91VD1) Galectin-12|
          Length = 314

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 6/57 (10%)
 Frame = +3

Query: 261 RKNIQLKTGCCSHPSSSAVKHLSYREYTIRCLSLDTA------PEKLSWPRAVISRG 413
           R  +  + GCC HP        S R YT++   +          +++ WP   + RG
Sbjct: 53  RFQVDFQCGCCLHPQPDVAFRFSPRFYTVKPHVICNTHQGGLWQKEIRWPGVALQRG 109



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>PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5)|
          Length = 505

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 12/55 (21%), Positives = 28/55 (50%)
 Frame = -3

Query: 292 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFSSSVK 128
           Q+ +     L+ ++S DY +   KKPW+     + P  C S+ ++   ++ + ++
Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYLNGIE 461



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>PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5)|
          Length = 505

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 12/55 (21%), Positives = 28/55 (50%)
 Frame = -3

Query: 292 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFSSSVK 128
           Q+ +     L+ ++S DY +   KKPW+     + P  C S+ ++   ++ + ++
Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYLNGIE 461



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>PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.5) (PCL1)|
          Length = 505

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 12/55 (21%), Positives = 28/55 (50%)
 Frame = -3

Query: 292 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFSSSVK 128
           Q+ +     L+ ++S DY +   KKPW+     + P  C S+ ++   ++ + ++
Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYLNGIE 461



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>LGT_MANSM (Q65VJ7) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 268

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 14/55 (25%)
 Frame = -3

Query: 214 WILVSRRRRPNSCWSLGMNKAFFFSSSV--------------KWDVFVSPPMLLF 92
           W+ V R  RP+S W++       F+                 +WD+FV  P  LF
Sbjct: 39  WLAVKRANRPDSGWTVEQVDNLLFNGFAGVFLGGRIGYVLFYQWDLFVQEPSYLF 93


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,828,034
Number of Sequences: 219361
Number of extensions: 1362665
Number of successful extensions: 3804
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3804
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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