Clone Name | rbastl30c01 |
---|---|
Clone Library Name | barley_pub |
>MTAL1_KLULA (Q08398) Mating-type protein ALPHA1 (Transcription activator| Alpha1p) (MATalpha1 protein) Length = 261 Score = 30.4 bits (67), Expect = 2.3 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +2 Query: 230 LQTIINTHVTSQKYTAQNWLLLTSQFLCGETPK 328 L TII+ H T K T +NW L+ ++ C + K Sbjct: 129 LSTIISKHWTVDKQTRKNWELIAQEYNCDASGK 161
>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC| 3.2.1.-) (Soluble cell wall protein 11) Length = 542 Score = 29.6 bits (65), Expect = 4.0 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +1 Query: 169 GSSKS*AAVAERPKSMASSFPPNNNQHSCNLAKIYSSKLAV 291 GSS S AA+ PK++A + P N+ SC A SS L + Sbjct: 269 GSSSSSAAITSSPKAIA--YSPYNDDGSCKSADAVSSDLTL 307
>IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34| (eIF-(iso)4F p82-34) Length = 788 Score = 29.6 bits (65), Expect = 4.0 Identities = 13/16 (81%), Positives = 15/16 (93%) Frame = -1 Query: 450 ISSHAAVVEACNSLLI 403 +SSHAAVV+ACNSL I Sbjct: 773 LSSHAAVVDACNSLSI 788
>LEG12_MOUSE (Q91VD1) Galectin-12| Length = 314 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 6/57 (10%) Frame = +3 Query: 261 RKNIQLKTGCCSHPSSSAVKHLSYREYTIRCLSLDTA------PEKLSWPRAVISRG 413 R + + GCC HP S R YT++ + +++ WP + RG Sbjct: 53 RFQVDFQCGCCLHPQPDVAFRFSPRFYTVKPHVICNTHQGGLWQKEIRWPGVALQRG 109
>PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5)| Length = 505 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/55 (21%), Positives = 28/55 (50%) Frame = -3 Query: 292 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFSSSVK 128 Q+ + L+ ++S DY + KKPW+ + P C S+ ++ ++ + ++ Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYLNGIE 461
>PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5)| Length = 505 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/55 (21%), Positives = 28/55 (50%) Frame = -3 Query: 292 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFSSSVK 128 Q+ + L+ ++S DY + KKPW+ + P C S+ ++ ++ + ++ Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYLNGIE 461
>PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.5) (PCL1)| Length = 505 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/55 (21%), Positives = 28/55 (50%) Frame = -3 Query: 292 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFSSSVK 128 Q+ + L+ ++S DY + KKPW+ + P C S+ ++ ++ + ++ Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYLNGIE 461
>LGT_MANSM (Q65VJ7) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)| Length = 268 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 14/55 (25%) Frame = -3 Query: 214 WILVSRRRRPNSCWSLGMNKAFFFSSSV--------------KWDVFVSPPMLLF 92 W+ V R RP+S W++ F+ +WD+FV P LF Sbjct: 39 WLAVKRANRPDSGWTVEQVDNLLFNGFAGVFLGGRIGYVLFYQWDLFVQEPSYLF 93 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,828,034 Number of Sequences: 219361 Number of extensions: 1362665 Number of successful extensions: 3804 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3730 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3804 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)