Clone Name | rbastl30b11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YLB5_CAEEL (P46580) Hypothetical protein C34E10.5 in chromosome III | 31 | 1.4 | 2 | GLSK_HUMAN (O94925) Glutaminase kidney isoform, mitochondrial pr... | 30 | 2.3 | 3 | GLSK_RAT (P13264) Glutaminase kidney isoform, mitochondrial prec... | 29 | 3.9 | 4 | GR101_LYMST (P46023) G-protein coupled receptor GRL101 precursor | 29 | 5.1 |
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>YLB5_CAEEL (P46580) Hypothetical protein C34E10.5 in chromosome III| Length = 734 Score = 30.8 bits (68), Expect = 1.4 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = -2 Query: 342 SYVRPLPSCALEIETGMPLVTSSCPILTAFLPLHGH-TPEYKSDHMKCVKHFTQRHLRPN 166 SYV+P+ S + + S P L+ +P HG PE D M ++ + Q H+R N Sbjct: 534 SYVKPIMSTHIH----QTIKAQSIPYLSRAIPSHGRGEPELDEDEM-WIQKYPQGHVRNN 588 Query: 165 TD 160 D Sbjct: 589 MD 590
>GLSK_HUMAN (O94925) Glutaminase kidney isoform, mitochondrial precursor (EC| 3.5.1.2) (GLS) (L-glutamine amidohydrolase) (K-glutaminase) Length = 669 Score = 30.0 bits (66), Expect = 2.3 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 5/46 (10%) Frame = -1 Query: 391 EKAKKGGGDKLIMLPPQLRSSTPFL-----CAGDRNRHAPGDLVMP 269 E AKK G K+ PQL +P L C D RH+ GD +P Sbjct: 236 ESAKKQSGGKVADYIPQLAKFSPDLWGVSVCTVDGQRHSTGDTKVP 281
>GLSK_RAT (P13264) Glutaminase kidney isoform, mitochondrial precursor (EC| 3.5.1.2) (GLS) (L-glutamine amidohydrolase) (K-glutaminase) [Contains: Glutaminase kidney isoform 68 kDa chain; Glutaminase kidney isoform 65 kDa chain] Length = 674 Score = 29.3 bits (64), Expect = 3.9 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 5/46 (10%) Frame = -1 Query: 391 EKAKKGGGDKLIMLPPQLRSSTPFL-----CAGDRNRHAPGDLVMP 269 E AKK G K+ PQL +P L C D RH+ GD +P Sbjct: 241 ESAKKQSGGKVADYIPQLAKFSPDLWGVSVCTVDGQRHSIGDTKVP 286
>GR101_LYMST (P46023) G-protein coupled receptor GRL101 precursor| Length = 1115 Score = 28.9 bits (63), Expect = 5.1 Identities = 18/50 (36%), Positives = 24/50 (48%) Frame = +1 Query: 94 TTIAAL*SNSTPECNKHNTSIRISIWSKMTLCEVFHTFHMITLVFRCVAM 243 TTI L +T N +++I S TLC V TFH + +CV M Sbjct: 7 TTIVCLIYLTTMLGNSQGVNLKIESPSPPTLCSVEGTFHCDDGMLQCVLM 56 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,092,284 Number of Sequences: 219361 Number of extensions: 1108022 Number of successful extensions: 2350 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2322 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2349 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)