ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl30b11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YLB5_CAEEL (P46580) Hypothetical protein C34E10.5 in chromosome III 31 1.4
2GLSK_HUMAN (O94925) Glutaminase kidney isoform, mitochondrial pr... 30 2.3
3GLSK_RAT (P13264) Glutaminase kidney isoform, mitochondrial prec... 29 3.9
4GR101_LYMST (P46023) G-protein coupled receptor GRL101 precursor 29 5.1

>YLB5_CAEEL (P46580) Hypothetical protein C34E10.5 in chromosome III|
          Length = 734

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -2

Query: 342 SYVRPLPSCALEIETGMPLVTSSCPILTAFLPLHGH-TPEYKSDHMKCVKHFTQRHLRPN 166
           SYV+P+ S  +       +   S P L+  +P HG   PE   D M  ++ + Q H+R N
Sbjct: 534 SYVKPIMSTHIH----QTIKAQSIPYLSRAIPSHGRGEPELDEDEM-WIQKYPQGHVRNN 588

Query: 165 TD 160
            D
Sbjct: 589 MD 590



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>GLSK_HUMAN (O94925) Glutaminase kidney isoform, mitochondrial precursor (EC|
           3.5.1.2) (GLS) (L-glutamine amidohydrolase)
           (K-glutaminase)
          Length = 669

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
 Frame = -1

Query: 391 EKAKKGGGDKLIMLPPQLRSSTPFL-----CAGDRNRHAPGDLVMP 269
           E AKK  G K+    PQL   +P L     C  D  RH+ GD  +P
Sbjct: 236 ESAKKQSGGKVADYIPQLAKFSPDLWGVSVCTVDGQRHSTGDTKVP 281



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>GLSK_RAT (P13264) Glutaminase kidney isoform, mitochondrial precursor (EC|
           3.5.1.2) (GLS) (L-glutamine amidohydrolase)
           (K-glutaminase) [Contains: Glutaminase kidney isoform 68
           kDa chain; Glutaminase kidney isoform 65 kDa chain]
          Length = 674

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
 Frame = -1

Query: 391 EKAKKGGGDKLIMLPPQLRSSTPFL-----CAGDRNRHAPGDLVMP 269
           E AKK  G K+    PQL   +P L     C  D  RH+ GD  +P
Sbjct: 241 ESAKKQSGGKVADYIPQLAKFSPDLWGVSVCTVDGQRHSIGDTKVP 286



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>GR101_LYMST (P46023) G-protein coupled receptor GRL101 precursor|
          Length = 1115

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +1

Query: 94  TTIAAL*SNSTPECNKHNTSIRISIWSKMTLCEVFHTFHMITLVFRCVAM 243
           TTI  L   +T   N    +++I   S  TLC V  TFH    + +CV M
Sbjct: 7   TTIVCLIYLTTMLGNSQGVNLKIESPSPPTLCSVEGTFHCDDGMLQCVLM 56


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,092,284
Number of Sequences: 219361
Number of extensions: 1108022
Number of successful extensions: 2350
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2349
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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