ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl30b08 |
|---|---|
| Clone Library Name | barley_pub |
>SYV_ARATH (P93736) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 1108 Score = 48.1 bits (113), Expect = 1e-05 Identities = 23/69 (33%), Positives = 37/69 (53%) Frame = -2 Query: 466 ALNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVI 287 A+N E E EK+R K E+QK + L + M S Y EK P +++E++ KL ++ Sbjct: 1032 AINTEAEQEKIRNKIGELQKQKEKLQKMMSVSTYEEKVPANIKEDNANKLAKILQEFDFF 1091 Query: 286 GEAEKKLDA 260 + +L A Sbjct: 1092 EKESARLAA 1100
>SYV_RAT (Q04462) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 1264 Score = 43.9 bits (102), Expect = 2e-04 Identities = 25/57 (43%), Positives = 31/57 (54%) Frame = -2 Query: 448 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 278 EL KL+ KR E Q+ L ++ ASGY K P VQE D KL +LR + EA Sbjct: 1200 ELGKLQAKRSEAQRQAQRLQERRAASGYSAKVPLEVQEADEVKLQQTEAELRKVDEA 1256
>SYV_FUGRU (P49696) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 1217 Score = 43.9 bits (102), Expect = 2e-04 Identities = 22/62 (35%), Positives = 35/62 (56%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG 284 ++ E E+ KL K+ +++K LS+K+ Y+EK P VQE+D KL +L + Sbjct: 1148 IDVEKEVPKLMGKKTDLEKQIEKLSEKISKGDYKEKVPVKVQEQDTEKLRQSQTELEKVK 1207 Query: 283 EA 278 EA Sbjct: 1208 EA 1209
>SYV_MOUSE (Q9Z1Q9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) (Protein G7a) Length = 1263 Score = 42.4 bits (98), Expect = 6e-04 Identities = 24/57 (42%), Positives = 30/57 (52%) Frame = -2 Query: 448 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 278 EL KL+ KR E Q+ L ++ AS Y K P VQE D KL +LR + EA Sbjct: 1199 ELGKLQAKRSEAQRQAQRLQERRAASSYSAKVPLEVQEADEAKLQQTEAELRKVDEA 1255
>SYV_HUMAN (P26640) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) (Protein G7a) Length = 1264 Score = 42.4 bits (98), Expect = 6e-04 Identities = 25/57 (43%), Positives = 31/57 (54%) Frame = -2 Query: 448 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 278 EL KL+ KR E Q+ L ++ ASGY K P VQE D KL +LR + EA Sbjct: 1200 ELGKLQAKRVEAQRQAQRLRERRAASGYPVKVPLEVQEADEAKLQQTEAELRKVDEA 1256
>SYV_ACIAD (Q6F8F0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 971 Score = 40.4 bits (93), Expect = 0.002 Identities = 21/68 (30%), Positives = 40/68 (58%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG 284 ++ + EL +L+K D++QK ++ K+ G+ KAP +V E + KL F +QL I Sbjct: 903 IDPKAELGRLQKDLDKVQKQHDQIASKLANEGFVAKAPAAVVEGEKVKLAEFADQLVKIK 962 Query: 283 EAEKKLDA 260 ++ +++ A Sbjct: 963 QSMEQIAA 970
>SYV_CARHZ (Q3AF87) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 878 Score = 38.5 bits (88), Expect = 0.009 Identities = 19/59 (32%), Positives = 33/59 (55%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVI 287 ++ E E E+L K+ ++ L+QK+ G+ KAP V ++ KLTAF+ + V+ Sbjct: 809 IDLEKEKERLNKELKKVLAEIERLNQKLNNPGFLAKAPAEVVNKEREKLTAFYREKEVL 867
>SYV_CLOTE (Q891R5) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 37.7 bits (86), Expect = 0.015 Identities = 19/66 (28%), Positives = 37/66 (56%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG 284 ++ E E+E+L K+R++++K + +K+ + +KAP +V E+ K + E L + Sbjct: 814 VDLEKEMERLNKEREKLEKEIERVDKKLSNENFVKKAPEAVVNEEKAKGEKYKEMLEAVL 873 Query: 283 EAEKKL 266 E K L Sbjct: 874 ERIKSL 879
>SYV_GEOKA (Q5KWL3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 37.4 bits (85), Expect = 0.019 Identities = 18/59 (30%), Positives = 32/59 (54%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVI 287 +N E E+++L K+ D+ K + +K+ G+ KAP V EE+ RK + E+ + Sbjct: 813 INIEEEIKRLEKELDKWNKEVERVEKKLANEGFLAKAPAHVVEEERRKRQDYIEKREAV 871
>SYV_BACST (P11931) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 37.4 bits (85), Expect = 0.019 Identities = 18/59 (30%), Positives = 32/59 (54%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVI 287 +N E E+++L K+ D+ K + +K+ G+ KAP V EE+ RK + E+ + Sbjct: 813 INIEEEIKRLEKELDKWNKEVERVEKKLANEGFLAKAPAHVVEEERRKRQDYIEKREAV 871
>SYV_BACHD (Q9K8G8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 37.0 bits (84), Expect = 0.025 Identities = 18/66 (27%), Positives = 36/66 (54%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG 284 L+ E E+ +L K+ ++++K + +K+ G+ KAP V EE+ +K + E+ + Sbjct: 813 LDLEEEIARLEKEENKLEKEVERVQKKLSNQGFLAKAPEKVIEEERKKEADYLEKRAAVR 872 Query: 283 EAEKKL 266 K+L Sbjct: 873 ARIKEL 878
>SYV_PASMU (Q9CMK5) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 954 Score = 35.0 bits (79), Expect = 0.095 Identities = 18/68 (26%), Positives = 35/68 (51%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG 284 +N E EL +L K+ ++ Q + K+ + KAPP+V E++ K+ + E L + Sbjct: 886 INKEAELARLNKEIEKYQGEIQRIENKLANEAFVAKAPPAVIEKERAKMAEYAEGLNKLK 945 Query: 283 EAEKKLDA 260 + ++A Sbjct: 946 QQYLAIEA 953
>SYV_NEIMB (Q9K1H7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 945 Score = 35.0 bits (79), Expect = 0.095 Identities = 18/66 (27%), Positives = 33/66 (50%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG 284 ++ E +L K+ +++QK L+ K+ GY EKAP + E+D L +++ + Sbjct: 878 IDKAAETARLSKEAEKLQKALDKLNAKLSKPGYTEKAPAHLVEKDKADLAELEDKMAKVQ 937 Query: 283 EAEKKL 266 KL Sbjct: 938 NQLAKL 943
>SYV_NEIMA (Q9JX22) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 945 Score = 35.0 bits (79), Expect = 0.095 Identities = 18/66 (27%), Positives = 33/66 (50%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG 284 ++ E +L K+ +++QK L+ K+ GY EKAP + E+D L +++ + Sbjct: 878 IDKATETARLSKEAEKLQKALDKLNAKLSKPGYTEKAPAHLVEKDKADLAELEDKMAKVQ 937 Query: 283 EAEKKL 266 KL Sbjct: 938 TQLSKL 943
>SYV_NEIG1 (Q5F5W0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 945 Score = 35.0 bits (79), Expect = 0.095 Identities = 18/66 (27%), Positives = 33/66 (50%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG 284 ++ E +L K+ +++QK L+ K+ GY EKAP + E+D L +++ + Sbjct: 878 IDKAAETARLSKEAEKLQKALDKLNAKLSKPGYTEKAPAHLVEKDKADLAELEDKMAKVQ 937 Query: 283 EAEKKL 266 KL Sbjct: 938 NQLAKL 943
>SYV_PELCD (Q3A253) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 899 Score = 35.0 bits (79), Expect = 0.095 Identities = 19/68 (27%), Positives = 39/68 (57%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG 284 ++ + E ++L K+ +++K S+K+ + KAP +V E+D +KL E+L ++ Sbjct: 830 IDLDEEQKRLNKEIAKVEKDVLMFSKKLSNESFLAKAPAAVLEKDRQKLADAEEKLSILK 889 Query: 283 EAEKKLDA 260 + +KL A Sbjct: 890 QGLEKLAA 897
>SYV_BACLD (Q65GK8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 34.7 bits (78), Expect = 0.12 Identities = 15/48 (31%), Positives = 29/48 (60%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRK 320 +N + E+ +L+K+ D++ K + +K+ G+ +KAP V EE+ K Sbjct: 813 INIDEEISRLQKELDKLTKEVERVQKKLSNEGFMKKAPAHVIEEERAK 860
>SYV_THEMA (Q9X2D7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 865 Score = 34.3 bits (77), Expect = 0.16 Identities = 20/56 (35%), Positives = 31/56 (55%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQL 296 ++ E E E+L++ ++IQK L +K+ + EKAP V EE KL E+L Sbjct: 799 IDFEKEKERLKQIMEKIQKEIDRLEKKLANKDFVEKAPEEVVEETKEKLNTNRERL 854
>SYV_THETH (P96142) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 862 Score = 33.5 bits (75), Expect = 0.28 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG 284 L+ E + K+ E+ L +K+ + G+REKAP V E + +L EQ I Sbjct: 796 LDVEEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIR 855 Query: 283 EA 278 EA Sbjct: 856 EA 857
>SYV_THET8 (Q5SJ45) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 862 Score = 33.5 bits (75), Expect = 0.28 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG 284 L+ E + K+ E+ L +K+ + G+REKAP V E + +L EQ I Sbjct: 796 LDVEEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIR 855 Query: 283 EA 278 EA Sbjct: 856 EA 857
>SYV_THET2 (Q72JG7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 862 Score = 33.5 bits (75), Expect = 0.28 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG 284 L+ E + K+ E+ L +K+ + G+REKAP V E + +L EQ I Sbjct: 796 LDVEEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLRENLEQAERIR 855 Query: 283 EA 278 EA Sbjct: 856 EA 857
>SYV_CHRVO (Q7NUM8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 939 Score = 33.5 bits (75), Expect = 0.28 Identities = 17/54 (31%), Positives = 30/54 (55%) Frame = -2 Query: 448 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVI 287 E +LRK++ +++ L+ K+E GY +KAP + E D +L ++L I Sbjct: 878 ETARLRKEQGKVEAELAKLTAKLEKPGYVDKAPAHLVERDKAQLAELNDKLEKI 931
>SYV_CLOAB (Q97GG8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 881 Score = 33.5 bits (75), Expect = 0.28 Identities = 16/56 (28%), Positives = 32/56 (57%) Frame = -2 Query: 448 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGE 281 E+E+L K++D+++ + +K+ G+ +KAP SV E + K + + L + E Sbjct: 820 EIERLSKEKDKLKAEIQRVDKKLSNKGFVDKAPESVVEAERVKGEKYKKMLEAVEE 875
>HLYB_TREHY (Q54316) Hemolysin B| Length = 828 Score = 30.4 bits (67), Expect(2) = 0.32 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Frame = -2 Query: 442 EKLRKKRDEIQKLQHALSQKME-ASGYREKAPPSVQEEDMRKLTAFFEQL---RVIGEAE 275 E K RDEI LQ LS+K E REK ++E+D+R + + + R++ Sbjct: 446 EDAAKIRDEITSLQEELSKKEEKCREEREKIETFIEEDDIRHVISEITNIPIKRLLNSES 505 Query: 274 KKL 266 K+L Sbjct: 506 KRL 508 Score = 21.6 bits (44), Expect(2) = 0.32 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 3/38 (7%) Frame = -1 Query: 239 VGSLFLLGPTGI---FVWKLILHLFFADGGDVTFIENS 135 +GS LGPTG+ + K++ F D + I+ S Sbjct: 547 LGSFIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMS 584
>SYV_BACSK (Q5WEQ4) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 33.1 bits (74), Expect = 0.36 Identities = 18/68 (26%), Positives = 35/68 (51%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG 284 L+ + E+ +L K+ D++ K + +K+ G+ KAP V EE+ K + + + + Sbjct: 813 LDLDKEVARLEKELDKLNKEVERIEKKLNNQGFLAKAPSHVVEEEKAKQQDYAAKRQTVI 872 Query: 283 EAEKKLDA 260 E +L A Sbjct: 873 ERIAELKA 880
>Y4417_BACTN (Q89ZG0) UPF0144 protein BT_4417| Length = 511 Score = 32.0 bits (71), Expect = 0.80 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 6/61 (9%) Frame = -2 Query: 460 NAEVELEKLRKKRDEIQKLQHALSQKMEA-SGY-----REKAPPSVQEEDMRKLTAFFEQ 299 N E +L + KK++E+ KLQH +K+EA SG +E+ S++EE + +F Sbjct: 109 NLEAQLVIVDKKKEELDKLQHQEIEKLEAISGLSADEAKERLVESLKEEAKTQAQSFIND 168 Query: 298 L 296 + Sbjct: 169 I 169
>SYV_PSEPK (Q88P76) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 31.2 bits (69), Expect = 1.4 Identities = 17/68 (25%), Positives = 34/68 (50%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG 284 ++ + EL +L K+ +Q + K+ + + +KAPP+V E++ KL + L Sbjct: 880 IDKDAELARLNKEIQRLQGEVQRVGGKLSNTAFVDKAPPAVIEKERAKLAESEQALANFT 939 Query: 283 EAEKKLDA 260 E ++ A Sbjct: 940 EQHARIAA 947
>HMMR_RAT (P97779) Hyaluronan-mediated motility receptor (Intracellular| hyaluronic acid-binding protein) (Receptor for hyaluronan-mediated motility) Length = 498 Score = 31.2 bits (69), Expect = 1.4 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 9/78 (11%) Frame = -2 Query: 466 ALNAEVEL--EKLRKKRDEIQKLQH-------ALSQKMEASGYREKAPPSVQEEDMRKLT 314 +L+AE+++ EKL +R E +KLQ L Q+ E S + ++ S QEE + Sbjct: 98 SLSAEMQVLTEKLLLERQEYEKLQQNELQSQSLLQQEKELSAHLQQQLCSFQEEMTSERN 157 Query: 313 AFFEQLRVIGEAEKKLDA 260 F EQL++ A +LDA Sbjct: 158 VFKEQLKL---ALDELDA 172
>CALD1_CHICK (P12957) Caldesmon (CDM)| Length = 771 Score = 30.8 bits (68), Expect = 1.8 Identities = 20/63 (31%), Positives = 36/63 (57%) Frame = -2 Query: 457 AEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 278 A VEL++L+K+R+E +K+ QK + +E+A ++EE+ +K + R A Sbjct: 520 AAVELDELKKRREERRKILEEEEQKKK----QEEAERKIREEEEKKRMKEEIERRRAEAA 575 Query: 277 EKK 269 EK+ Sbjct: 576 EKR 578
>CALD1_MELGA (P13505) Caldesmon, smooth muscle (CDM) (Fragment)| Length = 274 Score = 30.8 bits (68), Expect = 1.8 Identities = 20/63 (31%), Positives = 36/63 (57%) Frame = -2 Query: 457 AEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 278 A VEL++L+K+R+E +K+ QK + +E+A ++EE+ +K + R A Sbjct: 23 AAVELDELKKRREERRKILEEEEQKKK----QEEAERKIREEEEKKRMKEEIERRRAEAA 78 Query: 277 EKK 269 EK+ Sbjct: 79 EKR 81
>MKL2_MOUSE (P59759) MKL/myocardin-like protein 2 (Myocardin-related| transcription factor B) (MRTF-B) Length = 1080 Score = 30.4 bits (67), Expect = 2.3 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = -2 Query: 454 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEED 329 E ++E+L++K ++ QKL L ++E ++ PP Q D Sbjct: 561 EKQIEELKRKLEQEQKLVEVLKMQLEVEKRGQQRPPDPQPSD 602
>CALD1_RAT (Q62736) Non-muscle caldesmon (CDM) (L-caldesmon)| Length = 531 Score = 30.4 bits (67), Expect = 2.3 Identities = 22/63 (34%), Positives = 35/63 (55%) Frame = -2 Query: 457 AEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 278 A +ELE+L+KKR+E +K+ Q+ + KA +EE+ R+L E+ R EA Sbjct: 300 AALELEELKKKREERRKVLEEEEQRRKQEEADRKAR---EEEEKRRLKEEIERRR--AEA 354 Query: 277 EKK 269 +K Sbjct: 355 AEK 357
>MYH11_MOUSE (O08638) Myosin-11 (Myosin heavy chain, smooth muscle isoform)| (SMMHC) Length = 1972 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = -2 Query: 439 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQ---EEDMRKLTAFFEQLRVIGEAEKK 269 KLR+ DE LQ L ++MEA E+ ++ + +KL F + V+ E +K+ Sbjct: 1337 KLRQLEDERNSLQDQLDEEMEAKQNLERHVSTLNIQLSDSKKKLQDFASTIEVMEEGKKR 1396 Query: 268 L 266 L Sbjct: 1397 L 1397
>GRAP1_MOUSE (Q8VD04) GRIP1-associated protein 1 (GRASP-1) (HCMV-interacting| protein) Length = 806 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Frame = -2 Query: 448 ELEKLRKKRDEI-QKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEK 272 EL LR++ E+ +LQH ++ E G ++ +QE +R + EQL+ IG+ ++ Sbjct: 320 ELNMLREQTSELASELQHRQAEYEELMGQKDDLNSQLQES-LRANSRLLEQLQEIGQEKE 378 Query: 271 KL 266 +L Sbjct: 379 QL 380
>SYV_STAHJ (Q4L703) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 876 Score = 30.0 bits (66), Expect = 3.1 Identities = 14/55 (25%), Positives = 29/55 (52%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQ 299 ++ + E+ +L K+ D++QK + +K+ + KAP V E+ K + E+ Sbjct: 809 IDMDKEIARLEKELDKLQKELDRVDKKLSNENFVNKAPEKVINEEKEKQQRYQEK 863
>SYV_METCA (Q606C1) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 921 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/49 (30%), Positives = 27/49 (55%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKL 317 ++ E EL +L K+ + K L K+ + + KAPP+V E++ +L Sbjct: 853 IDKEAELTRLDKEIQRLDKELPRLEGKLGDASFLSKAPPAVVEKEKARL 901
>MYH7_HUMAN (P12883) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1935 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/61 (32%), Positives = 33/61 (54%) Frame = -2 Query: 448 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 269 ELEK+RK+ + ++KME E+A S++ E+ + L A E ++ E E+K Sbjct: 1525 ELEKVRKQLE---------AEKMELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERK 1575 Query: 268 L 266 L Sbjct: 1576 L 1576
>AMOL2_MOUSE (Q8K371) Angiomotin-like protein 2| Length = 772 Score = 30.0 bits (66), Expect = 3.1 Identities = 25/79 (31%), Positives = 37/79 (46%) Frame = -2 Query: 466 ALNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVI 287 A AE EL K + +++++LQ AL Q A RE+ ++ ++L A Q R Sbjct: 465 AARAEEELRKKQAYVEKVERLQQALGQLQAACEKREQLELRLRTRLEQELKALRAQQRQT 524 Query: 286 GEAEKKLDA*SGSAFESAL 230 G + GSA SAL Sbjct: 525 GTLAGGGGSHGGSAELSAL 543
>MYH7_MESAU (P13540) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1934 Score = 29.6 bits (65), Expect = 4.0 Identities = 20/61 (32%), Positives = 32/61 (52%) Frame = -2 Query: 448 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 269 ELEK+RK+ + ++KME E+A S++ E+ L A E ++ E E+K Sbjct: 1524 ELEKIRKQLE---------AEKMELQSALEEAEASLEHEEGNILRAQLEFNQIKAEIERK 1574 Query: 268 L 266 L Sbjct: 1575 L 1575
>SYV_OCEIH (Q8EPN2) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 883 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = -2 Query: 454 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRK 320 E EL K K+ + +QK K+ G+ KAP SV EE+ RK Sbjct: 827 ENELAKWTKEVERVQK-------KLSNQGFVSKAPESVVEEEKRK 864
>SYV_CLOPE (Q8XJ42) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/61 (26%), Positives = 32/61 (52%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG 284 ++ E ELE+L K++ +++ + +K+ + KAP +V E+ K + E L + Sbjct: 814 VDREKELERLNKEKTKLEGEILRVEKKLSNERFVSKAPEAVVNEERAKGVKYKEMLEAVL 873 Query: 283 E 281 E Sbjct: 874 E 874
>Y157_AQUAE (O66547) Hypothetical protein aq_157 precursor| Length = 162 Score = 29.6 bits (65), Expect = 4.0 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = -2 Query: 448 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG-EAEK 272 ELEK +K E QK AL + +E+ EKA +E+ +++ ++LR + EA+ Sbjct: 49 ELEKYQKLIQEKQKKLEALKKSLESKALSEKA----KEKKAKEIEQLEDELRKLQVEAQS 104 Query: 271 KL 266 KL Sbjct: 105 KL 106
>SYV_COXBU (Q83DD0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 920 Score = 29.6 bits (65), Expect = 4.0 Identities = 12/49 (24%), Positives = 29/49 (59%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKL 317 ++ + E+ +L+K+ ++QK + +K++ Y ++AP V E++ L Sbjct: 852 IDKQTEIARLKKEISKLQKEEEKSLKKLDNPNYLQRAPQEVVEKERLSL 900
>NUF1_YEAST (P32380) Protein NUF1 (Spindle poly body spacer protein SPC110)| Length = 944 Score = 29.6 bits (65), Expect = 4.0 Identities = 14/57 (24%), Positives = 34/57 (59%) Frame = -2 Query: 460 NAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRV 290 N++V+ KLR K DE++ L + L++ ++++ + ++ ++RK T +L++ Sbjct: 256 NSDVQSLKLRSKEDELKNLMNELNE-LKSNAEEKDTQLEFKKNELRKRTNELNELKI 311
>CDC37_MOUSE (Q61081) Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein| kinase-targeting subunit) (p50Cdc37) Length = 379 Score = 29.3 bits (64), Expect = 5.2 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = -2 Query: 460 NAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPP 347 + +VELE+LR + +++K + + QK+E +EK P Sbjct: 77 DGQVELERLRAEAQQLRKEERSWEQKLEDMRKKEKNMP 114
>MYH7_RAT (P02564) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1935 Score = 29.3 bits (64), Expect = 5.2 Identities = 19/61 (31%), Positives = 33/61 (54%) Frame = -2 Query: 448 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 269 ELEK+RK+ + ++K+E E+A S++ E+ + L A E ++ E E+K Sbjct: 1525 ELEKIRKQLE---------AEKLELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERK 1575 Query: 268 L 266 L Sbjct: 1576 L 1576
>INCE_CHICK (P53352) Inner centromere protein| Length = 877 Score = 29.3 bits (64), Expect = 5.2 Identities = 19/65 (29%), Positives = 34/65 (52%) Frame = -2 Query: 454 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAE 275 ++E + R+++DE + Q AL Q+ E ++E +EE+ + EQ + E E Sbjct: 599 KMEEAEARRRQDEEARKQKALQQEEEERRHKELMQKK-KEEEQERARKIAEQRQAEQERE 657 Query: 274 KKLDA 260 K+L A Sbjct: 658 KQLAA 662
>CALD1_HUMAN (Q05682) Caldesmon (CDM)| Length = 793 Score = 29.3 bits (64), Expect = 5.2 Identities = 23/63 (36%), Positives = 34/63 (53%) Frame = -2 Query: 457 AEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 278 A +ELE+L+KKR+E +K+ +E R K QEE RKL E+ R+ E Sbjct: 561 AALELEELKKKREERRKV-------LEEEEQRRK-----QEEADRKLREEEEKRRLKEEI 608 Query: 277 EKK 269 E++ Sbjct: 609 ERR 611
>MYH6_MESAU (P13539) Myosin heavy chain, cardiac muscle alpha isoform| (MyHC-alpha) Length = 1939 Score = 28.9 bits (63), Expect = 6.8 Identities = 20/61 (32%), Positives = 32/61 (52%) Frame = -2 Query: 448 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 269 ELEK+RK+ + +KME E+A S++ E+ + L A E ++ E E+K Sbjct: 1527 ELEKVRKQLEV---------EKMELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERK 1577 Query: 268 L 266 L Sbjct: 1578 L 1578
>CDC37_RAT (Q63692) Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein| kinase-targeting subunit) (p50Cdc37) Length = 379 Score = 28.9 bits (63), Expect = 6.8 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = -2 Query: 454 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPP 347 +VELE+LR + +++K + + QK+E +EK P Sbjct: 79 QVELERLRAEAQQLRKEERSWEQKLEDMRKKEKNMP 114
>SYV_PSEU2 (Q4ZXI0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = -2 Query: 448 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 269 EL +L K+ +Q + K+ + + +KAPP V ++ KLT + L + E + Sbjct: 885 ELARLDKEIQRLQGEVQRVGGKLSNAAFVDKAPPEVIAKERAKLTEAEQALGKLAEQHAR 944 Query: 268 L 266 + Sbjct: 945 I 945
>SYV_PSESM (Q887M3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = -2 Query: 448 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 269 EL +L K+ +Q + K+ + + +KAPP V ++ KLT + L + E + Sbjct: 885 ELARLDKEIQRLQGEVQRVGGKLSNAAFVDKAPPDVIAKERAKLTEAEQALGKLAEQHAR 944 Query: 268 L 266 + Sbjct: 945 I 945
>SYV_PSE14 (Q48MF2) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = -2 Query: 448 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 269 EL +L K+ +Q + K+ + + +KAPP V ++ KLT + L + E + Sbjct: 885 ELARLDKEIQRLQGEVQRVGGKLSNAAFVDKAPPEVIAKERAKLTEAEQALGKLAEQHAR 944 Query: 268 L 266 + Sbjct: 945 I 945
>RAD50_THEMA (Q9X1X1) Probable DNA double-strand break repair rad50 ATPase| Length = 852 Score = 28.9 bits (63), Expect = 6.8 Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 18/75 (24%) Frame = -2 Query: 454 EVELEKLRKKRDEIQKLQHALSQKMEASGYR-----------------EKAPPSVQEEDM 326 E +L++ RKK +I++ +H++SQK+ A+ + ++ Q E+M Sbjct: 522 EEKLDEKRKKLRKIEEERHSISQKITAADVQISQIENQLKEIKGEIEAKRETLKEQREEM 581 Query: 325 RKLTA-FFEQLRVIG 284 +L + FF++LR IG Sbjct: 582 DQLKSDFFDRLRKIG 596
>DNAK_BACME (P05646) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 604 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 5/62 (8%) Frame = -2 Query: 466 ALNAEVE---LEKLRKKRDEIQKLQHALSQKM--EASGYREKAPPSVQEEDMRKLTAFFE 302 AL A +E LE+++ K+DE+Q++ AL+ K+ +A ++ Q +D+ + A FE Sbjct: 540 ALKAAIEKNDLEEIKAKKDELQEIVQALTVKLYEQAQQAQQAGEQGAQNDDV--VDAEFE 597 Query: 301 QL 296 ++ Sbjct: 598 EV 599
>KI13A_HUMAN (Q9H1H9) Kinesin-like protein KIF13A (Kinesin-like protein RBKIN)| Length = 1805 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Frame = -2 Query: 463 LNAEVELEKLRKKRDEIQKLQHALSQ--KMEASGYREKAPPSVQEEDMRKLTAFFEQ 299 +N + + +R+ R+E++KL+ LSQ M+A +EK S E+ +++LT +E+ Sbjct: 358 VNEDPNAKVIRELREEVEKLREQLSQAEAMKAPELKEKLEES--EKLIKELTVTWEE 412
>SYV_AQUAE (O67411) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 1165 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 4/70 (5%) Frame = -2 Query: 463 LNAEVELEKL----RKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQL 296 + V+L+KL KKR+++ K +++K+ + +KAP V E++ + L Sbjct: 1094 IEGHVDLDKLIQSYEKKREKLLKELERVNKKLSNENFLKKAPVEVVEKEKQIKEELENDL 1153 Query: 295 RVIGEAEKKL 266 + + E K L Sbjct: 1154 KKVEEILKVL 1163
>PALM_CHICK (Q9YGL6) Paralemmin| Length = 386 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = -2 Query: 454 EVELE-KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEED 329 + E+E K R+ D+ ++LQH S+ + E AP S EED Sbjct: 24 QTEIENKRRQLEDDRRQLQHLKSKALRERWLLEGAPSSASEED 66
>CD2AP_HUMAN (Q9Y5K6) CD2-associated protein (Cas ligand with multiple SH3| domains) (Adapter protein CMS) Length = 639 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Frame = +2 Query: 167 PQKKGAVSTSKQKCQ*VPI---ETESRLKSTARLRI*FLLSLTDDPQLLEKGGELPHVLL 337 P+K + + K Q V I +TE ++K+ R F T++ +L K GE+ H++ Sbjct: 241 PEKPLILQSLGPKTQSVEITKTDTEGKIKAKEYCRTLFAYEGTNEDELTFKEGEIIHLIS 300 Query: 338 LDTG 349 +TG Sbjct: 301 KETG 304 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,824,165 Number of Sequences: 219361 Number of extensions: 1234373 Number of successful extensions: 4189 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 4057 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4184 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
