>ref|XM_469973.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2851

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 51/58 (87%), Gaps = 1/58 (1%)
 Strand = Plus / Minus

                                                                      
Query: 115  atatacaacaatggcactccggtacacaagtatc-ctgtacagacctgagcttcccaa 171
            |||||||||||||  |||| |||||||||||  | ||||||||| |||||||||||||
Sbjct: 2706 atatacaacaatgatactctggtacacaagttgcgctgtacagatctgagcttcccaa 2649

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 51/58 (87%), Gaps = 1/58 (1%)
 Strand = Plus / Minus

                                                                          
Query: 115      atatacaacaatggcactccggtacacaagtatc-ctgtacagacctgagcttcccaa 171
                |||||||||||||  |||| |||||||||||  | ||||||||| |||||||||||||
Sbjct: 33128998 atatacaacaatgatactctggtacacaagttgcgctgtacagatctgagcttcccaa 33128941

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 51/58 (87%), Gaps = 1/58 (1%)
 Strand = Plus / Minus

                                                                          
Query: 115      atatacaacaatggcactccggtacacaagtatc-ctgtacagacctgagcttcccaa 171
                |||||||||||||  |||| |||||||||||  | ||||||||| |||||||||||||
Sbjct: 33219508 atatacaacaatgatactctggtacacaagttgcgctgtacagatctgagcttcccaa 33219451

>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete
              sequence
          Length = 144487

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 51/58 (87%), Gaps = 1/58 (1%)
 Strand = Plus / Plus

                                                                        
Query: 115    atatacaacaatggcactccggtacacaagtatc-ctgtacagacctgagcttcccaa 171
              |||||||||||||  |||| |||||||||||  | ||||||||| |||||||||||||
Sbjct: 115557 atatacaacaatgatactctggtacacaagttgcgctgtacagatctgagcttcccaa 115614

>dbj|AK099884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111P21, full
            insert sequence
          Length = 2931

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 51/58 (87%), Gaps = 1/58 (1%)
 Strand = Plus / Minus

                                                                      
Query: 115  atatacaacaatggcactccggtacacaagtatc-ctgtacagacctgagcttcccaa 171
            |||||||||||||  |||| |||||||||||  | ||||||||| |||||||||||||
Sbjct: 2798 atatacaacaatgatactctggtacacaagttgcgctgtacagatctgagcttcccaa 2741

>dbj|AK069591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023M08, full
            insert sequence
          Length = 3011

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 51/58 (87%), Gaps = 1/58 (1%)
 Strand = Plus / Minus

                                                                      
Query: 115  atatacaacaatggcactccggtacacaagtatc-ctgtacagacctgagcttcccaa 171
            |||||||||||||  |||| |||||||||||  | ||||||||| |||||||||||||
Sbjct: 2866 atatacaacaatgatactctggtacacaagttgcgctgtacagatctgagcttcccaa 2809

>gb|BT019199.1| Zea mays clone Contig872.F mRNA sequence
          Length = 1093

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 51/59 (86%), Gaps = 1/59 (1%)
 Strand = Plus / Minus

                                                                      
Query: 138 acacaagta-tcctgtacagacctgagcttcccaaagagtacagtttattaccacctga 195
           ||||||||| ||||||||||||||| ||| |||||||   |||| ||||| ||||||||
Sbjct: 983 acacaagtaatcctgtacagacctgtgctccccaaaggacacagcttattgccacctga 925

>gb|AY104601.1| Zea mays PCO085879 mRNA sequence
          Length = 1686

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 51/59 (86%), Gaps = 1/59 (1%)
 Strand = Plus / Minus

                                                                       
Query: 138  acacaagta-tcctgtacagacctgagcttcccaaagagtacagtttattaccacctga 195
            ||||||||| ||||||||||||||| ||| |||||||   |||| ||||| ||||||||
Sbjct: 1421 acacaagtaatcctgtacagacctgtgctccccaaaggacacagcttattgccacctga 1363

>emb|CR974584.10| Mouse DNA sequence from clone RP23-99K9 on chromosome 12, complete
             sequence
          Length = 216921

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 36    agtctgataaatataaatatg 56
             |||||||||||||||||||||
Sbjct: 45732 agtctgataaatataaatatg 45712

>gb|AC140344.3| Mus musculus BAC clone RP23-237M10 from chromosome 12, complete
             sequence
          Length = 205862

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 36    agtctgataaatataaatatg 56
             |||||||||||||||||||||
Sbjct: 28527 agtctgataaatataaatatg 28547

>gb|AC002531.1|AC002531 Homo sapiens chromosome Y, clone 486_O_8, complete sequence
          Length = 197900

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 155    agacctgagcttcccaaagag 175
              |||||||||||||||||||||
Sbjct: 183590 agacctgagcttcccaaagag 183570

>gb|AC004474.1|AC004474 Homo sapiens chromosome Y, clone 475I1, complete sequence
          Length = 148280

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 155   agacctgagcttcccaaagag 175
             |||||||||||||||||||||
Sbjct: 29884 agacctgagcttcccaaagag 29864

>gb|AC117825.9| Mus musculus chromosome 18, clone RP24-80J4, complete sequence
          Length = 198559

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 368    ctgccagccaaaatggaaac 387
              ||||||||||||||||||||
Sbjct: 141737 ctgccagccaaaatggaaac 141756

>gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0015A05, complete sequence
          Length = 127330

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 354   ggcttgctttctctctgccagcca 377
             |||||||| |||||||||||||||
Sbjct: 41020 ggcttgctgtctctctgccagcca 40997

>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0077J22, complete sequence
          Length = 173903

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 354  ggcttgctttctctctgccagcca 377
            |||||||| |||||||||||||||
Sbjct: 2654 ggcttgctgtctctctgccagcca 2631

>ref|XM_581035.2| PREDICTED: Bos taurus similar to CG15021-PA, transcript variant 1
            (LOC504853), mRNA
          Length = 3422

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 231  agggtggacatgcaccgatttgag 254
            ||||||||||||||| ||||||||
Sbjct: 3290 agggtggacatgcacggatttgag 3313

>gb|AC120164.7| Mus musculus chromosome 19, clone RP24-470C3, complete sequence
          Length = 164107

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 205   gtaagtaacccaaacattgtagct 228
             ||||||||||||| ||||||||||
Sbjct: 59126 gtaagtaacccaatcattgtagct 59103

>gb|AC131151.2| Homo sapiens 3 BAC RP11-219E24 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 109988

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 36   agtctgataaatataaatat 55
            ||||||||||||||||||||
Sbjct: 5690 agtctgataaatataaatat 5709

>gb|AC122842.3| Mus musculus BAC clone RP23-148K14 from 1, complete sequence
          Length = 209506

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 354    ggcttgctttctctctgccagcca 377
              |||||||||||||| |||||||||
Sbjct: 109543 ggcttgctttctctgtgccagcca 109566

>emb|CR628331.7| Zebrafish DNA sequence from clone DKEY-208C12 in linkage group 17,
             complete sequence
          Length = 92644

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    tctgataaatataaatatgt 57
             ||||||||||||||||||||
Sbjct: 27093 tctgataaatataaatatgt 27112

>emb|CR733294.1| Gallus gallus finished cDNA, clone ChEST21a24
          Length = 1168

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 acagtttattaccacctgat 196
           ||||||||||||||||||||
Sbjct: 371 acagtttattaccacctgat 352

>gb|AC103930.10| Mus musculus chromosome 5, clone RP23-238D18, complete sequence
          Length = 203246

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   acaaactttgcaaacatttt 291
             ||||||||||||||||||||
Sbjct: 65186 acaaactttgcaaacatttt 65167

>gb|AC025047.17| Mus musculus chromosome 1, clone RP23-56I8, complete sequence
          Length = 220713

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 354    ggcttgctttctctctgccagcca 377
              |||||||||||||| |||||||||
Sbjct: 181248 ggcttgctttctctgtgccagcca 181225

>emb|AL354948.7| Human DNA sequence from clone RP11-378F20 on chromosome 9 Contains a
              novel gene, complete sequence
          Length = 175097

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 168    ccaaagagtacagtttatta 187
              ||||||||||||||||||||
Sbjct: 117819 ccaaagagtacagtttatta 117800

>emb|AL022157.1|HS323P24 Human DNA sequence from clone RP3-323P24 on chromosome Xp11.21-11.23
             Contains the gene for spindlin-like protein 2 (SPIN2), the
             gene for a novel protein similar to SPIN2 and a novel
             gene, complete sequence
          Length = 80611

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    ataaatataaatatgtactc 61
             ||||||||||||||||||||
Sbjct: 74840 ataaatataaatatgtactc 74859

>gb|AC156546.7| Mus musculus chromosome 18, clone RP23-131O22, complete sequence
          Length = 209678

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   atgagattcaaaaaccacaa 275
             ||||||||||||||||||||
Sbjct: 45633 atgagattcaaaaaccacaa 45652

>dbj|AB017437.1| Gallus gallus mRNA for avena, complete cds
          Length = 2265

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 acagtttattaccacctgat 196
           ||||||||||||||||||||
Sbjct: 454 acagtttattaccacctgat 435

>dbj|AK139683.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
            clone:B020010K11 product:unclassifiable, full insert
            sequence
          Length = 3581

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 368  ctgccagccaaaatggaaac 387
            ||||||||||||||||||||
Sbjct: 3326 ctgccagccaaaatggaaac 3345

>gb|AC157548.7| Mus musculus chromosome 18, clone RP24-310H1, complete sequence
          Length = 177509

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 368   ctgccagccaaaatggaaac 387
             ||||||||||||||||||||
Sbjct: 85948 ctgccagccaaaatggaaac 85929

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 354     ggcttgctttctctctgccagcca 377
               |||||||| |||||||||||||||
Sbjct: 2556134 ggcttgctgtctctctgccagcca 2556111

>gb|AC020589.4| Homo sapiens BAC clone RP11-143G24 from 4, complete sequence
          Length = 147185

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    tgataaatataaatatgtac 59
             ||||||||||||||||||||
Sbjct: 84175 tgataaatataaatatgtac 84156

>ref|NM_204300.1| Gallus gallus enabled homolog (Drosophila) (ENAH), mRNA
          Length = 3297

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 acagtttattaccacctgat 196
           ||||||||||||||||||||
Sbjct: 228 acagtttattaccacctgat 209

>emb|Z82211.1|HS447N6 Human DNA sequence from clone RP3-447N6 on chromosome X, complete
             sequence
          Length = 132229

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    ataaatataaatatgtactc 61
             ||||||||||||||||||||
Sbjct: 68832 ataaatataaatatgtactc 68813

>gb|AC136371.4| Mus musculus chromosome 1, clone RP23-405G16, complete sequence
          Length = 225976

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 354    ggcttgctttctctctgccagcca 377
              |||||||||||||| |||||||||
Sbjct: 184568 ggcttgctttctctgtgccagcca 184591

>ref|NR_002886.1| Mus musculus tubulin, alpha 2 pseudogene (LOC621740) on chromosome 18
          Length = 3581

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 368  ctgccagccaaaatggaaac 387
            ||||||||||||||||||||
Sbjct: 3326 ctgccagccaaaatggaaac 3345

>gb|AC161527.18| Mus musculus chromosome 3, clone RP23-174B21, complete sequence
          Length = 207130

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     ataaattaatcaaaacacca 36
              ||||||||||||||||||||
Sbjct: 194423 ataaattaatcaaaacacca 194442

>dbj|AB057641.1| Gallus gallus mRNA for avEna neural variant, complete cds
          Length = 3297

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 acagtttattaccacctgat 196
           ||||||||||||||||||||
Sbjct: 228 acagtttattaccacctgat 209

>dbj|AB035522.1| Gallus gallus mRNA for avenaII, complete cds
          Length = 2135

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 acagtttattaccacctgat 196
           ||||||||||||||||||||
Sbjct: 454 acagtttattaccacctgat 435


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,388,132
Number of Sequences: 3902068
Number of extensions: 4388132
Number of successful extensions: 103920
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 103783
Number of HSP's gapped (non-prelim): 137
length of query: 402
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 380
effective length of database: 17,147,199,772
effective search space: 6515935913360
effective search space used: 6515935913360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)