>gb|AC149610.1| Mus musculus BAC clone RP23-263D11 from chromosome 9, complete sequence
          Length = 187063

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 24    tataacaaaaataatcaca 42
             |||||||||||||||||||
Sbjct: 37984 tataacaaaaataatcaca 38002

>gb|AC116588.3| Mus musculus BAC clone RP23-448E6 from 9, complete sequence
          Length = 189927

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 24     tataacaaaaataatcaca 42
              |||||||||||||||||||
Sbjct: 188112 tataacaaaaataatcaca 188130

>gb|AC087871.9| Genomic sequence for Mus musculus, clone RP23-334N23, complete sequence
          Length = 117000

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    atataacaaaaataatcac 41
             |||||||||||||||||||
Sbjct: 13940 atataacaaaaataatcac 13958

>gb|AC171557.7| Mus musculus chromosome 7, clone RP24-62E17, complete sequence
          Length = 163762

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    atataacaaaaataatcac 41
             |||||||||||||||||||
Sbjct: 87263 atataacaaaaataatcac 87245

>gb|AC161450.3| Mus musculus BAC clone RP24-75I4 from chromosome 15, complete sequence
          Length = 198734

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 24    tataacaaaaataatcac 41
             ||||||||||||||||||
Sbjct: 17474 tataacaaaaataatcac 17491

>gb|AE014829.1| Plasmodium falciparum 3D7 chromosome 10 section 1 of 7 of the complete
              sequence
          Length = 250078

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 25     ataacaaaaataatcaca 42
              ||||||||||||||||||
Sbjct: 196539 ataacaaaaataatcaca 196522

>emb|AL136084.11| Human DNA sequence from clone RP11-92C4 on chromosome 9q22.33-31.3
              Contains the GALNT12 gene for
              UDP-N-acetyl-alpha-D-galactosamine:polypeptide
              N-acetylgalactosaminyltransferase 12 (GalNAc-T12), the 5'
              end of the COL15A1 gene for collagen type XV, alpha 1, a
              novel gene, a non-metastatic cells 2, protein (NM23B)
              expressed in (NME2) pseudogene and a CpG island, complete
              sequence
          Length = 149930

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 25     ataacaaaaataatcaca 42
              ||||||||||||||||||
Sbjct: 110969 ataacaaaaataatcaca 110952

>emb|AL096855.48|HS1115A15 Human DNA sequence from clone RP5-1115A15 on chromosome 1p36.11-36.31
              Contains part of the RERE gene for arginine-glutamic acid
              dipeptide (RE) repeats (KIAA0458, FLJ38775), a novel gene
              and a CpG island, complete sequence
          Length = 178403

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 23     atataacaaaaataatca 40
              ||||||||||||||||||
Sbjct: 177586 atataacaaaaataatca 177603

>gb|AC161457.5| Mus musculus BAC clone RP23-156A3 from chromosome 16, complete sequence
          Length = 208176

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 23    atataacaaaaataatca 40
             ||||||||||||||||||
Sbjct: 72486 atataacaaaaataatca 72469

>emb|AL929353.1|PFA929353 Plasmodium falciparum strain 3D7, chromosome 5, segment 3/4
          Length = 343050

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 23    atataacaaaaataatca 40
             ||||||||||||||||||
Sbjct: 37435 atataacaaaaataatca 37452

>emb|CR847783.6| Zebrafish DNA sequence from clone DKEYP-2C8 in linkage group 5,
             complete sequence
          Length = 184144

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 25    ataacaaaaataatcaca 42
             ||||||||||||||||||
Sbjct: 19909 ataacaaaaataatcaca 19892

>emb|BX510302.7| Zebrafish DNA sequence from clone RP71-81M21, complete sequence
          Length = 155767

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 23    atataacaaaaataatca 40
             ||||||||||||||||||
Sbjct: 70674 atataacaaaaataatca 70657

>emb|BX908400.8| Zebrafish DNA sequence from clone CH211-166I5 in linkage group 25,
             complete sequence
          Length = 136937

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 23    atataacaaaaataatca 40
             ||||||||||||||||||
Sbjct: 23474 atataacaaaaataatca 23491

>gb|AC092278.3| Homo sapiens chromosome 5 clone CTD-2012B7, complete sequence
          Length = 123469

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 23    atataacaaaaataatca 40
             ||||||||||||||||||
Sbjct: 67810 atataacaaaaataatca 67793

>gb|AC010595.7| Homo sapiens chromosome 5 clone CTC-480C2, complete sequence
          Length = 179484

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 25    ataacaaaaataatcaca 42
             ||||||||||||||||||
Sbjct: 50405 ataacaaaaataatcaca 50388

>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 25      ataacaaaaataatcaca 42
               ||||||||||||||||||
Sbjct: 1466180 ataacaaaaataatcaca 1466163

>gb|AC148816.3| Medicago truncatula chromosome 7 BAC clone mth2-16i24, complete
             sequence
          Length = 123655

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 23    atataacaaaaataatca 40
             ||||||||||||||||||
Sbjct: 61968 atataacaaaaataatca 61985

>gb|AC099617.13| Mus musculus chromosome 15, clone RP23-445J4, complete sequence
          Length = 180493

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 24     tataacaaaaataatcac 41
              ||||||||||||||||||
Sbjct: 124575 tataacaaaaataatcac 124592

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 25       ataacaaaaataatcaca 42
                ||||||||||||||||||
Sbjct: 22922233 ataacaaaaataatcaca 22922216

>gb|AC121609.3| Mus musculus BAC clone RP23-320N4 from chromosome 15, complete sequence
          Length = 195165

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 24     tataacaaaaataatcac 41
              ||||||||||||||||||
Sbjct: 191671 tataacaaaaataatcac 191688

>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0104B02
          Length = 169588

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 25    ataacaaaaataatcaca 42
             ||||||||||||||||||
Sbjct: 96071 ataacaaaaataatcaca 96054

>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome
          Length = 2519802

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 25     ataacaaaaataatcaca 42
              ||||||||||||||||||
Sbjct: 896311 ataacaaaaataatcaca 896294

>emb|AL672003.6| Mouse DNA sequence from clone RP23-285G5 on chromosome X, complete
              sequence
          Length = 221912

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 25     ataacaaaaataatcaca 42
              ||||||||||||||||||
Sbjct: 181005 ataacaaaaataatcaca 181022

>emb|AL928964.7| Zebrafish DNA sequence from clone CH211-127I19, complete sequence
          Length = 168321

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 23    atataacaaaaataatca 40
             ||||||||||||||||||
Sbjct: 58430 atataacaaaaataatca 58413

>emb|AL732616.3| Mouse DNA sequence from clone RP23-466D3 on chromosome 2, complete
              sequence
          Length = 123372

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 25     ataacaaaaataatcaca 42
              ||||||||||||||||||
Sbjct: 113978 ataacaaaaataatcaca 113995


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 546,920
Number of Sequences: 3902068
Number of extensions: 546920
Number of successful extensions: 154537
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 154348
Number of HSP's gapped (non-prelim): 189
length of query: 42
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 22
effective length of database: 17,155,003,908
effective search space: 377410085976
effective search space used: 377410085976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)