>gb|AC161056.5| Mus musculus BAC clone RP23-241J7 from chromosome 3, complete sequence
          Length = 226878

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 441    acttcattggctggctggctgg 462
              ||||||||||||||||||||||
Sbjct: 188998 acttcattggctggctggctgg 188977

>gb|AC144485.2| Gasterosteus aculeatus clone CH213-101E8, complete sequence
          Length = 203829

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 141   taacgctagctagcaagatagt 162
             ||||||||||||||||||||||
Sbjct: 37032 taacgctagctagcaagatagt 37053

>gb|AC123878.4| Mus musculus BAC clone RP23-318I20 from 3, complete sequence
          Length = 215121

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 441   acttcattggctggctggctgg 462
             ||||||||||||||||||||||
Sbjct: 18232 acttcattggctggctggctgg 18253

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 83       ggaatagctactactagtact 103
                |||||||||||||||||||||
Sbjct: 10797910 ggaatagctactactagtact 10797930

>gb|AC135908.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1275B08,
             from chromosome 3, complete sequence
          Length = 108833

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 83    ggaatagctactactagtact 103
             |||||||||||||||||||||
Sbjct: 56977 ggaatagctactactagtact 56957

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 83       ggaatagctactactagtact 103
                |||||||||||||||||||||
Sbjct: 10796011 ggaatagctactactagtact 10796031

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 161      gtagataaatatttacatcag 181
                |||||||||||||||||||||
Sbjct: 40693065 gtagataaatatttacatcag 40693045

>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0093F16
          Length = 160925

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 161    gtagataaatatttacatcag 181
              |||||||||||||||||||||
Sbjct: 135043 gtagataaatatttacatcag 135023

>dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022C23, full
            insert sequence
          Length = 3151

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 161  gtagataaatatttacatcag 181
            |||||||||||||||||||||
Sbjct: 2943 gtagataaatatttacatcag 2923

>gb|AF186999.4| Homo sapiens chromosome 8 clone CTA-394H5 map 8cen, complete sequence
          Length = 82674

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   tcttaactgccaagagcaag 275
             ||||||||||||||||||||
Sbjct: 21677 tcttaactgccaagagcaag 21696

>gb|AC103956.4| Homo sapiens chromosome 8, clone CTA-394H5, complete sequence
          Length = 82676

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   tcttaactgccaagagcaag 275
             ||||||||||||||||||||
Sbjct: 21678 tcttaactgccaagagcaag 21697

>gb|AC011128.7| Homo sapiens chromosome 8, clone RP11-119N19, complete sequence
          Length = 183978

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 256    tcttaactgccaagagcaag 275
              ||||||||||||||||||||
Sbjct: 174439 tcttaactgccaagagcaag 174420

>gb|AF298862.1|AF298862 Giardia intestinalis variant-specific surface protein M21-1 (M21-1)
           gene, partial cds
          Length = 1644

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 91  tactactagtactgcaggtc 110
           ||||||||||||||||||||
Sbjct: 763 tactactagtactgcaggtc 744

>emb|AL671185.8| Mouse DNA sequence from clone RP23-192N1 on chromosome X, complete
              sequence
          Length = 229574

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 264    gccaagagcaagcaaaccag 283
              ||||||||||||||||||||
Sbjct: 207832 gccaagagcaagcaaaccag 207851


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,538,873
Number of Sequences: 3902068
Number of extensions: 3538873
Number of successful extensions: 78778
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78664
Number of HSP's gapped (non-prelim): 114
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)